| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1250 |
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| Symbol | |
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| ID | 6161094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1338459 |
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| End bp | 1340000 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664004 |
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| Product | deoxyribodipyrimidine photolyase-related protein |
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| Protein accession | YP_001790284 |
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| Protein GI | 171057935 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3046] Uncharacterized protein related to deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000733779 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCTGAGT TGCGCAATCT CGTTCTCGTG CTGGGCGATC AGCTCGACCT GGAAGCCGCC
GCGTTCGACG GTTTCGACGC CGCACACGAC GCGGTCTGGA TGGCCGAGGT GGCCGAGGAA
TCGACCCATG TGTGGTCGAG CAAGCCACGC AGCGTGATGT TCCTGGCCGC GATGCGCCAC
TTCGCGCAGG CGCTGCGTGC CGCCGGCCGG CCCTTGCACC CCATGCGGCT GGACGACCCG
ACCAACCAAG GCAGCCTGGC CGCGCAACTG CAGGCCGACA TCGAGCGCCT GCGCCCGGCC
CGGCTGGTGA TGACTGCACC GGGCGACTGG CGCGTGCTGC AGGCGATCAA GGATGTGGCG
CAGGCACACG GCCTGCCGCT GGAGATCCGC GAGGACCGCC ATTTCTATGG CAGCGTGCGC
GAGTTCGCGG CGCATGCGCG CGGCCGCAAG TCGCTGCGCA TGGAATATTT CTATCGCGAA
ATGCGCAAGC GCCACGGCGT GCTGATGCAA GGCGAGCAGC CCGAAGGCGG CCAGTGGAAC
TTCGACGCCG ACAACCGCGA GGCGTTTGGC GCCGCCGGTC CGGGCAGCGT GCCACCGCGG
GCGGTGTTCG AGCCCGATGC CATGACACGC GAGGTGATCG CGCTGGTCGA GGCGCGCTTG
GCCGACCACC CCGGCCGGCT GGACGACTTC GCCTGGCCGG TGTCGCGCGA ACAGGCGCTC
GTCGCGCTGC AGCGTTTCGT CACCGAGCGC CTGCCGCTGT TCGGCCGCTA CCAGGACGCG
ATGTGGCCCG GCGAGCCCTG GCTGCATCAC GCGCACCTGT CGGCGGCACT GAACCTGAAG
CTGCTGAACC CGCGCGAGGT GGTCGACGCG GCCGTCGCCG CCTACCGCGC GGGCGCGGCG
CCGCTGGCCA GCGTGGAAGG TTTCGTGCGC CAGATCCTGG GCTGGCGCGA GTACGTGCGC
GGCATCTACT GGACCCGAAT GCCCGGCTAC GCCGAGCTCA ACACGCTGGA CGCACAGGAA
GACCTGCCGG CCTGGTACTG GACCGGCGCC ACCGACATGG CCTGCCTGCG CGATGCGATC
GGGCAGACGC TGCAGCACGG CTACGCCCAC CACATCCAGC GCCTGATGGT CACCGGCCTG
TTCGCGCTGA TGTACGGCGT GCAGCCGCAG CAGGTGCATG CCTGGTATCT GGCGGTCTAC
GTCGATGCGG TCGAATGGGT CGAGCTGCCC AACACGCTGG GCATGAGCCA GTACGCCGAC
GGCGGCCTGA TGGCCAGCAA GCCCTACGTG GCCACCGGCA AGTACATCCA GCGCATGAGC
CCCTACTGCA AGGGCTGCCG CTACGACCCC GCGCAGCGCA GCGGCGACGC GGCCTGCCCG
TTCACCACGC TGTACTGGGA CTTCCTGATG AAGCACGAGG CCGCGCTGGC CGGCAATCCG
CGCATGGCGC TGCAGGTGAA GAACGTGGCG CGCCTGAACG ACGGCCAGAA GCAGGCGATC
CGAGAACGCG CGTCTGCGAT CCGCCGCGGC GAGGTGCGCT GA
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| Protein sequence | MAELRNLVLV LGDQLDLEAA AFDGFDAAHD AVWMAEVAEE STHVWSSKPR SVMFLAAMRH
FAQALRAAGR PLHPMRLDDP TNQGSLAAQL QADIERLRPA RLVMTAPGDW RVLQAIKDVA
QAHGLPLEIR EDRHFYGSVR EFAAHARGRK SLRMEYFYRE MRKRHGVLMQ GEQPEGGQWN
FDADNREAFG AAGPGSVPPR AVFEPDAMTR EVIALVEARL ADHPGRLDDF AWPVSREQAL
VALQRFVTER LPLFGRYQDA MWPGEPWLHH AHLSAALNLK LLNPREVVDA AVAAYRAGAA
PLASVEGFVR QILGWREYVR GIYWTRMPGY AELNTLDAQE DLPAWYWTGA TDMACLRDAI
GQTLQHGYAH HIQRLMVTGL FALMYGVQPQ QVHAWYLAVY VDAVEWVELP NTLGMSQYAD
GGLMASKPYV ATGKYIQRMS PYCKGCRYDP AQRSGDAACP FTTLYWDFLM KHEAALAGNP
RMALQVKNVA RLNDGQKQAI RERASAIRRG EVR
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