| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2281 |
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| Symbol | |
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| ID | 4078465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2398532 |
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| End bp | 2400055 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007603 |
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| Product | deoxyribodipyrimidine photolyase-related protein |
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| Protein accession | YP_614275 |
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| Protein GI | 99082121 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3046] Uncharacterized protein related to deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.558867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGGC TTGTTTTGGT GCTGGGGGAC CAGCTTTCAG AAGGGTTGTC GGCGCTCAAA
GCGGCAGACC CTGCACATGA TGTGGTGGTG ATGGCGGAGG TGATGGACGA GGGCACATAT
GTCCCGCATC ACCCCAAGAA GATCGCGTTG GTGCTGGCGG CGATGCGCAA GTTTGCGCAG
CGTCTAGAAG GGCAGGGCTG GCGTGTGGCC TATCGGCGTC TGGACGAGGA TGGCGCGGAG
AGCATCGTGG GCGAACTCTT GCGCCGGGCC GAAGAATTTG GCGCCTCGGA GGTGCTGGCC
ACCACGCCGG GCGAGTGGCG GCTGATCCAC GCGTTGAAAT ATGCCCCCCT CAAGGTTCAT
TTTCATGCCG ACGACCGCTT TCTCGCCACG CGCGAGGATT TCACCGAGTG GGCCGAGGGC
AAAAAACAGC TCCGGATGGA GTATTTCTAT CGCCTGATGC GCAAGAAAAC CGGCCTTCTG
ATGGAGGGAG ACACCCCGGT TGGCGGCAAG TGGAATTACG ATTCAGAGAA CCGCAAGGCG
CCCCCCAAGA TCATCGACCA CAAGGGGCCA CCCCGGTTTG AACCGGACGC CGAGGTCGAG
GAGGTGCTGG ATCTGGTGGA GGCGCGCTTT GGCACTCATT TCGGGGATCT GCGCCCGTTC
TGGTTTGCCA CAACCCGCGA AGAAGCGCAG GAGGCGCTTG CGCATTTCAT CACCCACGCT
CTGCCGCAGT TCGGGGACTA TCAGGATGCG ATGATGACGG ATGAGCGCTG GCTCTATCAC
TCCATCCTGT CGCCCTATCT CAACATCGGT CTGTTGACCC CGCTGGAGAT CTGCGAGGCG
GCCGAGGTCG CACATCAGGA CGGCCATGCG CCGCTCAATG CGGTCGAAGG TTTCATCCGG
CAGATCCTCG GGTGGCGGGA GTATGTGCGG GGGATCTATT TCCTCGAGGG GGAGGATTAC
CCCACGCGCA ACGCACTGGA ACAAACCCGA GCGCTGCCCG CGCTCTATTG GGGGGCGGAG
ACGGACATGC ATTGCCTCTC GCAAGCGGTG GAGCAGACCG GGCAGGAGGC CTACGCCCAC
CACATCCAGC GGCTGATGGT GACCGGGAAT TTTGCGCTTT TGGCCGGGGT TGATCCGGCA
CAGGTGCACG AATGGTATCT CGCAGTGTAT GCAGATGCGT TTGAGTGGGT CGAGGCGCCC
AACACCGTCG GCATGAGCCA GTTTGCCGAT GGCGGCATCA TTGCCTCCAA ACCCTATGTC
TCCAGCGGTG CCTACATCGA CAGAATGTCC AATTATTGCG GAAGTTGCGC CTATAAGGTG
AAGCAAAAAA CGGGCGAGGG CGCCTGTCCG TTCAACCTGC TGTACTGGGA TTTCCTGAAC
CGCCACCGGG CACGGTTTGA GGGCAACCCG CGCATGGGCA ACATGTATCG CACCTGGGAC
CGGATGGACG AAGAGAAACG CGATGTGATT TTGCAGGAAG CGAGCGCGTT CCTCGCAAAA
CTTGACGCGG GCGAAAGAGT TTAG
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| Protein sequence | MTRLVLVLGD QLSEGLSALK AADPAHDVVV MAEVMDEGTY VPHHPKKIAL VLAAMRKFAQ
RLEGQGWRVA YRRLDEDGAE SIVGELLRRA EEFGASEVLA TTPGEWRLIH ALKYAPLKVH
FHADDRFLAT REDFTEWAEG KKQLRMEYFY RLMRKKTGLL MEGDTPVGGK WNYDSENRKA
PPKIIDHKGP PRFEPDAEVE EVLDLVEARF GTHFGDLRPF WFATTREEAQ EALAHFITHA
LPQFGDYQDA MMTDERWLYH SILSPYLNIG LLTPLEICEA AEVAHQDGHA PLNAVEGFIR
QILGWREYVR GIYFLEGEDY PTRNALEQTR ALPALYWGAE TDMHCLSQAV EQTGQEAYAH
HIQRLMVTGN FALLAGVDPA QVHEWYLAVY ADAFEWVEAP NTVGMSQFAD GGIIASKPYV
SSGAYIDRMS NYCGSCAYKV KQKTGEGACP FNLLYWDFLN RHRARFEGNP RMGNMYRTWD
RMDEEKRDVI LQEASAFLAK LDAGERV
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