| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_0647 |
|---|
| Symbol | |
|---|
| ID | 8752303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 690691 |
|---|
| End bp | 692277 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | deoxyribodipyrimidine photolyase-related protein |
|---|
| Protein accession | YP_003407796 |
|---|
| Protein GI | 284989242 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCGCAGG ACCCGGCGGT TGACCGCGTG GTGCCCGGCA CGCCGCGACG GCTCGGGGGC
GACCCGGCGC TGGCCGCGTT CCCCGCCCGC GCGCCGGGCA CCCGGCGGTG GTGCTTCGCC
GACCAGCTCG GGCCGCACTT CCTCGACCGG CCGGACCAGC CGGTCCTGCT GATCGAGTCC
AGGGCGGTGT TCGCGCGCCG CCGGTTCCAC CGCCAGAAGG CCCACCTGGT GCTGTCGGCG
CTGCGCCACC GGGCCGCCGA GCTGGGCGAC CAGGCGCAGT TCTCCCAGGT GCACTCCTAC
GCCGAGGCGC TGGACCGGGT GCGCGAGCCG CTGAGCGTGT GCGCCCCCAC CACCTGGAGC
AGCCGCGACT ACGTGCTGCG CCGTCCCGAC CTCACCGTCC TCGCCGCCCG CGGGTTCGTC
GCCACGCAGG AGGAGTTCGC CGCCTGGGCG GAGGGTCGCG GCCGGCGGCG GCTGCTCATG
GAGGACTTCT ACCGGGACAA CCGGCGCCGC CACGACGTCC TCATGGACGG AGCCGAGCCG
GTGGGCGGGC GCTGGAACCT CGACCACGAC AACCGGGAGC CCCCGCCGTC CGACGGGCGT
CTCGACATCC CCGGGCCGTG GTGGCCGGAG GAGGACGAGA TCGACGAGCA GGTGCGCGCC
GACCTCGACC GCTGGGAGGC CGACGGCGAC GTGGCCTTCG TGGGGGACGA CGGCCCGCGG
CTGTTCCCGG TGACCCGCGA GGAGGCGCTG CACCGGCTGC GCGACTTCCT CGACACCCGG
CTCGGCGCGT TCGGCCCGCA CGAGGACGCC ATGCTCGCCG GCGACCGCTG GATGACGCAC
TCGCTGCTCT CCCCGGCCGT CAACCTCGGC CTGCTGGACC CGATCGAGGA GGTGCACGCC
GCCGAGCAGC GCTACCGCGA CTCCGTGGCC GAGGGCGACC CGCTGCCGCT CAACAGCGTG
GAGGGGTTCG TCCGCCAGGT CATGGGCTGG CGCGACTACA TCTGGCACAC CTACTGGCAC
TTCGGCCGGG ACTTCCGGCA CGCCAACGCC CTGGCCGCGC ACGAGGCGGT GCCGGACTGG
CTGGCCGACC TCGACGACGG GGCCGTCGAC GCCGCGTGCA TGTCCGACGT CCTCGGCGAC
CTGCGCCGCG ACGGCTGGGT GCACCACATC CCGCGGCTGA TGGTGCTCGG CAACTACGCG
CTGCAGCGCG GCATCGACCC GCTGGCGATG ACCGACTGGT TCCACCGCAG CTTCGTCGAC
GGCTACGACT GGGTGATGAT CGCCAACGTC GTCGGCATGA GCCAGCACGC CGACGGCGGG
CTGCTGGCCA CCAAGCCCTA CGCCGCCGGC GGCGCCTACA TCGACCGGAT GAGCGACTAC
TGCGGCGGCT GCCGCTACGA CCCGCGGAAG CGGCTGGGCG AGGACGCCTG CCCCTTCACC
GCCGGCTACT GGGCCTTCCT CGAGCGCAAC CGCGAGCGGC TGGCACCCAA CCAGCGGATG
CGCCGTGCGC TGCAGGGTCT CGACCGGCTC AAGGGCCTGG AGGAGGTCGT CGAGCAGGAG
CGTCTGCGCG GCACCGAGGC CATCTGA
|
|---|
| Protein sequence | MPQDPAVDRV VPGTPRRLGG DPALAAFPAR APGTRRWCFA DQLGPHFLDR PDQPVLLIES
RAVFARRRFH RQKAHLVLSA LRHRAAELGD QAQFSQVHSY AEALDRVREP LSVCAPTTWS
SRDYVLRRPD LTVLAARGFV ATQEEFAAWA EGRGRRRLLM EDFYRDNRRR HDVLMDGAEP
VGGRWNLDHD NREPPPSDGR LDIPGPWWPE EDEIDEQVRA DLDRWEADGD VAFVGDDGPR
LFPVTREEAL HRLRDFLDTR LGAFGPHEDA MLAGDRWMTH SLLSPAVNLG LLDPIEEVHA
AEQRYRDSVA EGDPLPLNSV EGFVRQVMGW RDYIWHTYWH FGRDFRHANA LAAHEAVPDW
LADLDDGAVD AACMSDVLGD LRRDGWVHHI PRLMVLGNYA LQRGIDPLAM TDWFHRSFVD
GYDWVMIANV VGMSQHADGG LLATKPYAAG GAYIDRMSDY CGGCRYDPRK RLGEDACPFT
AGYWAFLERN RERLAPNQRM RRALQGLDRL KGLEEVVEQE RLRGTEAI
|
|---|
| |