Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_2012 |
Symbol | |
ID | 8324112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 2130796 |
End bp | 2132304 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644953137 |
Product | deoxyribodipyrimidine photolyase-related protein |
Protein accession | YP_003110587 |
Protein GI | 256372763 |
COG category | [R] General function prediction only |
COG ID | [COG3046] Uncharacterized protein related to deoxyribodipyrimidine photolyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGAACAC GGCCAACCAC CGTCTGGATC CTCGGCGACC AACTCAACCG ATCGATCTCG TCACTCGAGG GGGCAGACCC GTCGTCGACG GTCGTGCTGT TCGTCGTCAG CCGAGCCAAG CTGGCCGCCC GCCCATGGCA TCGCCAGCGT CTGCACGCCA TCCTCGCGGG GATGGCGCGG TTCGCAGCCG AGCTGAGAGC CGAGGGATTC CGTGTCGACG AGCGAGAGGC CGACACGTTC ACCGAGGGTC TCGCGGCCCA CCGCGCCTCC TATCGACCTG AGACCGTGCG CATGATGGCG CCGGAGTCGT TCGCTGGCGA GGCGCTGGCT CGCCGGCTTG GGGTCGAACT CGTTGCATCC AACCTCTTCC TGACGACGCG CGAGGAGTTC GGCGAGTGGA TCGCTCAGAC CCTTGAGCGT GGGCGTCGCC CACGCATGGA GGAGTTCTAC CGCTGGCAGC GTCGGCGCCT CGGCATCCTC ATGGACGAAG ACGGACCCGC CGGAGGCCGC TGGAACTTCG ACTCGGAGAA CCGACTGCCT CCGCCACGAG CCCCGGTTGC ATGGCCCACG GTGATCGTCG ATCAGCTCGA TCAGCTCGAT GTGCGTATCG TGGCCTCACT GCCGGATCAA GCTGTCGGAG ACCCACCCCA GGGTTGGTGG CCGACCAATC GGGTCGGAGC ACTGCGACGC CTGCGCGCCT TCATCGACGA GGGACTTAGT CGCTTCGGAC CGTACGAGGA CGCCATGTTG GCTGACGAAC CGCGCCTCGC GCACTCCATG CTCTCCGTCG CCCTGAATCT CGGCCTCCTC CACCCGCACG AGGTTGTCGA GGCTGTCGAA CGCGCCTTTC GGGACGGTCG CGTCGGACTC TCGTCCGCCG AGGGCTTCCT GCGCCAGGTG ATCGGGTGGC GTGAGTACGT GCGTGGGTTC TATTGGTGGC AGGGCCCCAC GTATCGGAGT CAGAACGCAC TCGGTGCTGA GCGACCATTG CCGCCAGCGC TGGCCACCGG ACGAACCAGG ATGCGCTGCG TGCGAACGAC GCTCGAAGGG GTCGAGCGCC ATGGCTGGGT CCACCACATC CAACGACTCA TGGTGCTGGC GAACCTCGGC ACCCTCACCG GCGTCCAGCC GGCCGCGATG CTCGACTGGA TGTGGGAGCG CTTCGTCGAC GGAGCGGAGT GGGTCATGGT GCCGAACGTG ATCGGAATGG GCCTCTGGGC CGACGGCGGC GTCATGGCAA CGAAGCCCTA CGTCGCGGGA GGTGCGTACC TGCGACGTAT GAGCGACTAC TGCCGATCCT GTGAGTACGA CCCTCGTCAG CGCACGGGAG ATCGCGCATG CCCCTTCACG ACGCTGTATT GGTGGTTTCT CGACCGACAC CGTGAACGCT TTGCTCACCA TCCGCGCATG GCCCCGCTCC TGCACAACCT CGATCGACTC GGTGACCTCA CTGCGATCCG AGAGCGTGCC CGGCAGATCC TCGAACTCCT CGACGCGGGC CTCGCCTGA
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Protein sequence | MGTRPTTVWI LGDQLNRSIS SLEGADPSST VVLFVVSRAK LAARPWHRQR LHAILAGMAR FAAELRAEGF RVDEREADTF TEGLAAHRAS YRPETVRMMA PESFAGEALA RRLGVELVAS NLFLTTREEF GEWIAQTLER GRRPRMEEFY RWQRRRLGIL MDEDGPAGGR WNFDSENRLP PPRAPVAWPT VIVDQLDQLD VRIVASLPDQ AVGDPPQGWW PTNRVGALRR LRAFIDEGLS RFGPYEDAML ADEPRLAHSM LSVALNLGLL HPHEVVEAVE RAFRDGRVGL SSAEGFLRQV IGWREYVRGF YWWQGPTYRS QNALGAERPL PPALATGRTR MRCVRTTLEG VERHGWVHHI QRLMVLANLG TLTGVQPAAM LDWMWERFVD GAEWVMVPNV IGMGLWADGG VMATKPYVAG GAYLRRMSDY CRSCEYDPRQ RTGDRACPFT TLYWWFLDRH RERFAHHPRM APLLHNLDRL GDLTAIRERA RQILELLDAG LA
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