113 homologs were found in PanDaTox collection
for query gene Dret_1823 on replicon NC_013223
Organism: Desulfohalobium retbaense DSM 5692



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013223  Dret_1823  deoxyribodipyrimidine photolyase-related protein  100 
 
 
502 aa  1048    Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0760009  normal 
 
 
-
 
NC_013132  Cpin_7174  deoxyribodipyrimidine photolyase-related protein  47.25 
 
 
492 aa  471  1.0000000000000001e-131  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_007516  Syncc9605_1361  photolyase family protein  47.39 
 
 
498 aa  453  1.0000000000000001e-126  Synechococcus sp. CC9605  Bacteria  normal  0.174089  normal  0.307121 
 
 
-
 
NC_007513  Syncc9902_1117  photolyase family protein  46.06 
 
 
505 aa  437  1e-121  Synechococcus sp. CC9902  Bacteria  normal  0.322412  n/a   
 
 
-
 
NC_008817  P9515_04871  hypothetical protein  41.84 
 
 
496 aa  432  1e-120  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_009091  P9301_04471  hypothetical protein  41.98 
 
 
496 aa  425  1e-118  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  0.77539  n/a   
 
 
-
 
NC_008816  A9601_04781  hypothetical protein  41.36 
 
 
496 aa  420  1e-116  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.289419  n/a   
 
 
-
 
NC_007577  PMT9312_0423  hypothetical protein  41.72 
 
 
496 aa  418  9.999999999999999e-116  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  0.27403  n/a   
 
 
-
 
NC_008228  Patl_2797  deoxyribodipyrimidine photolyase-related protein  42.71 
 
 
503 aa  412  1e-114  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2542  deoxyribodipyrimidine photolyase-related protein  41.23 
 
 
537 aa  367  1e-100  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000228868 
 
 
-
 
NC_013440  Hoch_2030  deoxyribodipyrimidine photolyase-related protein  41.82 
 
 
519 aa  364  2e-99  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0662893  normal  0.30492 
 
 
-
 
NC_008819  NATL1_15641  hypothetical protein  36.57 
 
 
496 aa  363  4e-99  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal  0.681049 
 
 
-
 
NC_013521  Sked_26230  deoxyribodipyrimidine photolyase-related protein  41.09 
 
 
532 aa  361  2e-98  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.355559  normal  0.113738 
 
 
-
 
NC_007335  PMN2A_0726  hypothetical protein  36.36 
 
 
496 aa  359  5e-98  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2999  deoxyribodipyrimidine photolyase-related protein  35.5 
 
 
513 aa  286  5e-76  Pseudomonas putida W619  Bacteria  normal  normal  0.248063 
 
 
-
 
NC_004578  PSPTO_3689  hypothetical protein  35.21 
 
 
512 aa  286  8e-76  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.116484  n/a   
 
 
-
 
NC_007005  Psyr_1785  deoxyribodipyrimidine photolyase-like protein protein  35.61 
 
 
519 aa  286  8e-76  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  hitchhiker  0.00721619 
 
 
-
 
NC_007492  Pfl01_2809  deoxyribodipyrimidine photolyase-like protein  34.22 
 
 
512 aa  284  2.0000000000000002e-75  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3077  hypothetical protein  36.58 
 
 
508 aa  284  3.0000000000000004e-75  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3804  deoxyribodipyrimidine photolyase-related protein  37.02 
 
 
508 aa  284  3.0000000000000004e-75  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.206805 
 
 
-
 
NC_009767  Rcas_4251  deoxyribodipyrimidine photolyase-related protein  35.35 
 
 
508 aa  281  2e-74  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_02017  deoxyribodipyrimidine photolyase-related protein  33.12 
 
 
512 aa  281  2e-74  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.571234  n/a   
 
 
-
 
NC_008312  Tery_3925  deoxyribodipyrimidine photolyase-related protein  34.04 
 
 
476 aa  280  4e-74  Trichodesmium erythraeum IMS101  Bacteria  normal  hitchhiker  0.0027073 
 
 
-
 
NC_011831  Cagg_3318  deoxyribodipyrimidine photolyase-related protein  35.73 
 
 
497 aa  279  7e-74  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.420687  hitchhiker  0.00000494763 
 
 
-
 
NC_009484  Acry_1728  deoxyribodipyrimidine photolyase-related protein  36.53 
 
 
513 aa  278  2e-73  Acidiphilium cryptum JF-5  Bacteria  normal  0.483675  n/a   
 
 
-
 
NC_008044  TM1040_2281  deoxyribodipyrimidine photolyase-related protein  34.27 
 
 
507 aa  276  8e-73  Ruegeria sp. TM1040  Bacteria  normal  normal  0.558867 
 
 
-
 
NC_014230  CA2559_07801  deoxyribodipyrimidine photolyase related protein  33.55 
 
 
511 aa  273  5.000000000000001e-72  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.179708  n/a   
 
 
-
 
NC_007963  Csal_0896  deoxyribodipyrimidine photolyase-related protein  34.69 
 
 
524 aa  273  7e-72  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3101  deoxyribodipyrimidine photolyase-related protein  34.16 
 
 
510 aa  272  1e-71  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3022  deoxyribodipyrimidine photolyase-related protein  33.47 
 
 
508 aa  271  2e-71  Pseudomonas putida F1  Bacteria  normal  0.619117  normal 
 
 
-
 
NC_009379  Pnuc_1608  deoxyribodipyrimidine photolyase-related protein  35.84 
 
 
511 aa  270  2.9999999999999997e-71  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2732  hypothetical protein  33.47 
 
 
508 aa  270  5.9999999999999995e-71  Pseudomonas putida KT2440  Bacteria  normal  0.380402  normal 
 
 
-
 
NC_013889  TK90_0821  deoxyribodipyrimidine photolyase-related protein  33.73 
 
 
525 aa  270  5.9999999999999995e-71  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.627102  normal  0.414989 
 
 
-
 
NC_011662  Tmz1t_0531  deoxyribodipyrimidine photolyase-related protein  36.35 
 
 
511 aa  270  5.9999999999999995e-71  Thauera sp. MZ1T  Bacteria  normal  0.548466  n/a   
 
 
-
 
NC_010087  Bmul_5845  deoxyribodipyrimidine photolyase-related protein  34.66 
 
 
509 aa  269  7e-71  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0524  deoxyribodipyrimidine photolyase-related protein  33.46 
 
 
521 aa  269  1e-70  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2956  hypothetical protein  34.66 
 
 
508 aa  267  2.9999999999999995e-70  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.888276  normal  0.195961 
 
 
-
 
NC_010717  PXO_01727  deoxyribodipyrimidine photolyase-related protein  35.59 
 
 
525 aa  266  5e-70  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4518  deoxyribodipyrimidine photolyase-related protein  37.09 
 
 
533 aa  264  3e-69  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3641  deoxyribodipyrimidine photolyase-related protein  33.98 
 
 
508 aa  263  4.999999999999999e-69  Jannaschia sp. CCS1  Bacteria  normal  normal  0.175337 
 
 
-
 
NC_006369  lpl0260  hypothetical protein  31.23 
 
 
512 aa  263  6e-69  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_0009  deoxyribodipyrimidine photolyase-related protein  32.95 
 
 
508 aa  262  8e-69  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0417103 
 
 
-
 
NC_008321  Shewmr4_3526  deoxyribodipyrimidine photolyase-related protein  34.31 
 
 
525 aa  262  1e-68  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_5626  deoxyribodipyrimidine photolyase-related protein  34.54 
 
 
534 aa  261  3e-68  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.147008  normal  0.0556848 
 
 
-
 
NC_014148  Plim_3755  deoxyribodipyrimidine photolyase-related protein  34.38 
 
 
532 aa  261  3e-68  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3704  deoxyribodipyrimidine photolyase-related protein  34.63 
 
 
525 aa  260  4e-68  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1396  DNA photolyase  32.87 
 
 
524 aa  260  4e-68  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.64137  n/a   
 
 
-
 
NC_004347  SO_4169  hypothetical protein  34.63 
 
 
521 aa  259  6e-68  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_0429  deoxyribodipyrimidine photolyase-related protein  33.86 
 
 
525 aa  259  6e-68  Shewanella sp. MR-7  Bacteria  normal  0.50429  normal 
 
 
-
 
NC_009439  Pmen_1204  deoxyribodipyrimidine photolyase-related protein  33.33 
 
 
520 aa  259  6e-68  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.000923921  normal 
 
 
-
 
NC_009456  VC0395_0425  hypothetical protein  34.97 
 
 
516 aa  258  2e-67  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000280647  n/a   
 
 
-
 
NC_010511  M446_5454  deoxyribodipyrimidine photolyase-related protein  33.14 
 
 
533 aa  258  2e-67  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.120235 
 
 
-
 
NC_013457  VEA_000795  DNA photolyase  32.55 
 
 
514 aa  254  2.0000000000000002e-66  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0599  deoxyribodipyrimidine photolyase-related protein  33.69 
 
 
508 aa  254  3e-66  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.315159  normal 
 
 
-
 
NC_008347  Mmar10_1000  deoxyribodipyrimidine photolyase-related protein  32.33 
 
 
511 aa  252  1e-65  Maricaulis maris MCS10  Bacteria  normal  0.760695  normal 
 
 
-
 
NC_009784  VIBHAR_06692  hypothetical protein  33.33 
 
 
514 aa  251  2e-65  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007794  Saro_2394  deoxyribodipyrimidine photolyase-related protein  32.77 
 
 
522 aa  251  3e-65  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_1235  deoxyribodipyrimidine photolyase-related protein  32.98 
 
 
511 aa  250  3e-65  Halothiobacillus neapolitanus c2  Bacteria  decreased coverage  0.00923753  n/a   
 
 
-
 
NC_008345  Sfri_0777  deoxyribodipyrimidine photolyase-related protein  32.88 
 
 
528 aa  250  4e-65  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_4487  deoxyribodipyrimidine photolyase-related protein  31.84 
 
 
506 aa  249  8e-65  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007604  Synpcc7942_1171  hypothetical protein  32.25 
 
 
503 aa  247  3e-64  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3928  BCCT transporter  36.55 
 
 
508 aa  247  3e-64  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.240048  normal  0.840759 
 
 
-
 
NC_010506  Swoo_3929  deoxyribodipyrimidine photolyase-related protein  34.21 
 
 
531 aa  247  4e-64  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1250  deoxyribodipyrimidine photolyase-related protein  34.86 
 
 
513 aa  245  1.9999999999999999e-63  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000733779 
 
 
-
 
NC_009654  Mmwyl1_0335  deoxyribodipyrimidine photolyase-related protein  32.03 
 
 
522 aa  243  3.9999999999999997e-63  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_1054  hypothetical protein  32.41 
 
 
521 aa  243  5e-63  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.624164 
 
 
-
 
NC_009665  Shew185_0441  deoxyribodipyrimidine photolyase-related protein  32.49 
 
 
525 aa  242  1e-62  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2169  deoxyribodipyrimidine photolyase-related protein  34.21 
 
 
498 aa  242  1e-62  Meiothermus ruber DSM 1279  Bacteria  normal  0.752806  normal 
 
 
-
 
NC_009997  Sbal195_0458  deoxyribodipyrimidine photolyase-related protein  33.14 
 
 
521 aa  240  4e-62  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_0467  deoxyribodipyrimidine photolyase-related protein  32.49 
 
 
521 aa  239  8e-62  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3872  deoxyribodipyrimidine photolyase-related protein  32.3 
 
 
521 aa  238  2e-61  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3982  deoxyribodipyrimidine photolyase-related protein  32.76 
 
 
507 aa  238  2e-61  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.00134489 
 
 
-
 
NC_011312  VSAL_I1806  hypothetical protein  34.05 
 
 
523 aa  237  4e-61  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.501424  n/a   
 
 
-
 
NC_008709  Ping_1551  deoxyribodipyrimidine photolyase-related protein  32.97 
 
 
516 aa  236  8e-61  Psychromonas ingrahamii 37  Bacteria  normal  0.585368  normal  0.610204 
 
 
-
 
NC_013124  Afer_2012  deoxyribodipyrimidine photolyase-related protein  33.4 
 
 
502 aa  232  1e-59  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_2689  deoxyribodipyrimidine photolyase-related protein  31.73 
 
 
508 aa  231  3e-59  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.14747 
 
 
-
 
NC_008825  Mpe_A2055  putative alpha-deoxyribodipyrimidine photolyase-related protein  36.16 
 
 
510 aa  230  6e-59  Methylibium petroleiphilum PM1  Bacteria  normal  0.527245  normal 
 
 
-
 
NC_008700  Sama_2497  hypothetical protein  32.8 
 
 
569 aa  208  2e-52  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_0647  deoxyribodipyrimidine photolyase-related protein  34.01 
 
 
528 aa  207  3e-52  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_3490  deoxyribodipyrimidine photolyase-related protein  29.53 
 
 
505 aa  195  2e-48  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.189609 
 
 
-
 
NC_013235  Namu_2791  deoxyribodipyrimidine photolyase-related protein  32.47 
 
 
500 aa  192  8e-48  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000121396  hitchhiker  0.0000216403 
 
 
-
 
NC_008146  Mmcs_2924  deoxyribodipyrimidine photolyase-related protein  29.39 
 
 
525 aa  191  2.9999999999999997e-47  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_2968  deoxyribodipyrimidine photolyase-related protein  29.39 
 
 
525 aa  191  2.9999999999999997e-47  Mycobacterium sp. KMS  Bacteria  normal  0.278599  normal 
 
 
-
 
NC_009077  Mjls_2939  deoxyribodipyrimidine photolyase-related protein  29.33 
 
 
496 aa  191  2.9999999999999997e-47  Mycobacterium sp. JLS  Bacteria  normal  normal  0.119687 
 
 
-
 
NC_008726  Mvan_3270  deoxyribodipyrimidine photolyase-related protein  29.84 
 
 
494 aa  190  5e-47  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.737297  normal 
 
 
-
 
NC_013158  Huta_0265  deoxyribodipyrimidine photolyase-related protein  32.26 
 
 
510 aa  187  3e-46  Halorhabdus utahensis DSM 12940  Archaea  normal  0.319874  n/a   
 
 
-
 
NC_009664  Krad_3082  deoxyribodipyrimidine photolyase-related protein  32.03 
 
 
510 aa  181  4e-44  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.47785  normal  0.0294382 
 
 
-
 
NC_010531  Pnec_1265  deoxyribodipyrimidine photolyase-like protein  39.42 
 
 
186 aa  82.8  0.00000000000001  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.224709 
 
 
-
 
NC_010086  Bmul_4692  deoxyribodipyrimidine photo-lyase  26.43 
 
 
476 aa  54.7  0.000003  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_1604  Deoxyribodipyrimidine photo-lyase  26.13 
 
 
486 aa  52.4  0.00002  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_3180  deoxyribodipyrimidine photolyase family protein  21.98 
 
 
469 aa  51.2  0.00004  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.478094  n/a   
 
 
-
 
NC_010322  PputGB1_0780  deoxyribodipyrimidine photo-lyase  25.55 
 
 
475 aa  51.2  0.00004  Pseudomonas putida GB-1  Bacteria  normal  0.431367  normal 
 
 
-
 
NC_005957  BT9727_2935  deoxyribodipyrimidine photolyase  21.98 
 
 
476 aa  50.8  0.00005  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_3187  deoxyribodipyrimidine photolyase family protein  21.98 
 
 
476 aa  50.8  0.00005  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_003909  BCE_3184  deoxyribodipyrimidine photolyase family protein  22.84 
 
 
476 aa  50.4  0.00006  Bacillus cereus ATCC 10987  Bacteria  normal  0.262936  n/a   
 
 
-
 
NC_005945  BAS2956  deoxyribodipyrimidine photolyase family protein  21.98 
 
 
476 aa  50.8  0.00006  Bacillus anthracis str. Sterne  Bacteria  normal  0.13805  n/a   
 
 
-
 
NC_006368  lpp0271  hypothetical protein  22.57 
 
 
471 aa  50.1  0.0001  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl0266  hypothetical protein  22.57 
 
 
471 aa  49.3  0.0001  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_011658  BCAH187_A3193  deoxyribodipyrimidine photolyase family protein  21.98 
 
 
476 aa  47.8  0.0004  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_02016  DNA photolyase  26.47 
 
 
474 aa  47.4  0.0006  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0782959  n/a   
 
 
-
 
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