| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2055 |
|---|
| Symbol | |
|---|
| ID | 4784632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 2195062 |
|---|
| End bp | 2196594 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640090625 |
|---|
| Product | putative alpha-deoxyribodipyrimidine photolyase-related protein |
|---|
| Protein accession | YP_001021248 |
|---|
| Protein GI | 124267244 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3046] Uncharacterized protein related to deoxyribodipyrimidine photolyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.527245 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCACC TGGTCGTGGT GCTGGGCGAT CAGCTGGATC TGCACGCCGC CGCGTTCGAC
GGCTTCGACG CCGCACGCGA TGCGGTGTGG ATGGCCGAGG TGGCCGAGGA ATCGGCGCAT
GTGTGGTCGA GCCAACCGCG CACGGTGATG TTCCTCGCCG CGATGCGCCA CTTCGCGCTC
GCCCTGCGTG CGGCTGGGCG AGCCTTGCAT TACGCCGCGC TGGACGATCC CGCCACGCAC
GGCAGCCTGC AGGCGCAGCT GCACGCCGAC ATCGAACGCC TGCGCCCCAC CGGCCTCGTG
ATGACGGCCC CAGGCGACTG GCGCGTGCTG CAGGCGATCA AGTGCGTGGC GCAGGCGCAG
GGCCTGCCGC TCGAGATCCG CGAGGACCGC CATTTCTACG GCAGCGTGCG CGAGTTCGCG
GCCCACGCGC GCGGCCGCAA GGCGCTACGC ATGGAGTACT TCTACCGCGA GATGCGCAAG
CGCCACGGCG TGTTGATGCA CGGAGACGAG CCCGAGGGCG GCCAGTGGAA TTTCGATGCC
GACAACCGCG AGGCCTTCGG TGCCGCCGGC CCGGGCGCCG TGCCGCCGCG TGCGGTGTTC
GAGCCCGATG CGCTCACGCG CGAGGTGATC GCGCTGGTCG AGAAGCGCTT CGGCACCCAT
CCCGGCCGAC TCGATGGCTT TGCCTGGCCG GTGACGCGTG CACAGGCACT CGTCGCGCTG
CAGCGCTTCA TCACCGAGCG CCTGCCGCTG TTCGGCCGCT ACCAGGACGC CATGTGGCCC
GGCGAACCCT GGCTGTACCA CGCCCACCTG GCGGCCGCGC TGAACCTGAA GCTGCTGAAC
CCGCGCGAGG TCGTGGACGC GGCCGTAGCG GCCTACCGCG GGGGCGCCGC GCCGCTGGCC
GGCGTGGAAG GCTTCGTGCG CCAGATCCTC GGCTGGCGCG AGTACGTGCG CGGCATCTAC
TGGACCCGCA TGCCGGGCTA TGCCGAGCTC AATGCACTGG ACGCCCGCGA AGACCTGCCC
GCCTGGTACT GGACCGGCGA CACCGAGATG GCCTGCCTGC GCGACGCGAT CACGCAGACG
CTGCAGCACG GCTACGCGCA CCACATCCAG CGCCTGATGG TCACCGGCCT GTACGCGCTG
ATGCTGGGCG TGCAGCCGCA GCAGGTGCAC GCCTGGTACC TGGCGGTGTA CGTGGATGCC
GTCGAATGGG TGGAACTGCC CAACACCCTG GGCATGAGCC AGTACGCGGA CGGCGGGCTG
ATGGGCAGCA AGCCCTACGT GGCGACCGGC AAGTACATCC AGCGCATGAG CCCGCACTGC
CAGGGCTGCC GCTACGACCC CGCCCAGCGC ACGGGCGAGA AGGCCTGCCC GTTCACCACG
CTGTACTGGG ATTTCCTGAT GCGCCACGAG GAGACGCTGG CCGGCAATCC GCGCATGGCG
CTGCAGGTGA AGAACGTGGC GCGTCTGGAC GACGCGCAGA AGCAGGCGAT CCGCGAGCGC
GCAGTGGCTA TCCGCAACGG CGCGGTCGCG TGA
|
|---|
| Protein sequence | MRHLVVVLGD QLDLHAAAFD GFDAARDAVW MAEVAEESAH VWSSQPRTVM FLAAMRHFAL
ALRAAGRALH YAALDDPATH GSLQAQLHAD IERLRPTGLV MTAPGDWRVL QAIKCVAQAQ
GLPLEIREDR HFYGSVREFA AHARGRKALR MEYFYREMRK RHGVLMHGDE PEGGQWNFDA
DNREAFGAAG PGAVPPRAVF EPDALTREVI ALVEKRFGTH PGRLDGFAWP VTRAQALVAL
QRFITERLPL FGRYQDAMWP GEPWLYHAHL AAALNLKLLN PREVVDAAVA AYRGGAAPLA
GVEGFVRQIL GWREYVRGIY WTRMPGYAEL NALDAREDLP AWYWTGDTEM ACLRDAITQT
LQHGYAHHIQ RLMVTGLYAL MLGVQPQQVH AWYLAVYVDA VEWVELPNTL GMSQYADGGL
MGSKPYVATG KYIQRMSPHC QGCRYDPAQR TGEKACPFTT LYWDFLMRHE ETLAGNPRMA
LQVKNVARLD DAQKQAIRER AVAIRNGAVA
|
|---|
| |