| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1204 |
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| Symbol | |
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| ID | 5108705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1359803 |
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| End bp | 1361365 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502429 |
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| Product | deoxyribodipyrimidine photolyase-related protein |
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| Protein accession | YP_001186701 |
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| Protein GI | 146306236 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3046] Uncharacterized protein related to deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000923921 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGCAG CGCCGGGGCC TGCCGACTCG GGCACACGCC GCCTGATCCT GGTGCTGGGA
GATCAGCTCA CCCCGGCACT GGGCGCGCTG GCGCAGATCG ACGCGCGGCA TGACCGGGTG
TTGCTGGCCG AGGTGATGGA GGAGGCCAGT CATGTGCCGC ATCACCCCAA GAAGATCGCA
CTGATCTTCA GCGCCATGCG CCATTTCGCC GAAGCCCTGC GCACGCAGGG CATCCAGGTG
CATTACGTGA CCCTGGACGA TCCCGACAAC AGCGGCTCCT TGCCCGGCGA ACTGCAGCGC
TGGACGCAGC GGCTGAATCC CGCCGAAGTG CACCTGACCG AGTGTGGCGA CTGGCGCCTG
GAACAGTCGC TGCGCCACTG CGGCGTGCCG ATCCACTGGC ATCAGGACAG CCGTTTTCTC
TGCACGCGCG AGGCCTTCGC CGCCTGGGCG AAGGATCGCA AGCAGCTGCG CATGGAGTTC
TTCTACCGCG AGATGCGCCG CACCAGTGGC CTGCTGCTCA ATCCCGACGG CACGCCCGAA
GGCGGCGCCT GGAACTTCGA TGCCGACAAC CGCAAGGCGC TGCCCAAGGA GGTGCGCCCA
CCCACGGCAT GGCGCATCGA GCCGGACGCC ATCACGCACG AGGTGCTGGC GTTGGTCGGG
CAGCGTTTTA CCGAGCACTA CGGCAGCCTG GAGGGTTTCG ACTACCCGGT GACCGCCGAG
CAGGCCGAGC GTCTCTGGCA GCATTTTCTC GCCAACGGCC TGGCCGAGTT TGGCGATTAC
CAGGACGCCA TGGCCGATGA CGAGCCGTTT CTCTTTCATT CACGCATCAG CGCCGCACTG
AACATCGGCC TGCTCGATCT GCGGCGGGTC TGCGCCGAAG TCGAGGCGGC TTATCGTGCC
GGCGACGTGC CGCTGAACGC CGCCGAAGGT TTCATTCGCC AACTGATCGG CTGGCGCGAA
TACGTGCGCG GCATCTACTG GCTGCGCATG CCGGAGTACG CCGAAGGCAA CGCCTTCGGC
AATTCACGCG CGCTGCCCGA GTTCTACTGG ACCGGCCGGA CGCGCATGAA CTGCATGCGC
CAGGCCATTG GCCAGACCCT GGAGCATGCC TACGCCCACC ATATCCAGCG GCTGATGGTC
ACCGGCAACT TCGCGCTGCT GGCCGGCATC GCGCCCAAGG CCATCTGCGG CTGGTACCTG
GCCGTGTACA TGGACGCCTT CGACTGGGTG GAGCTGCCCA ACACCCTGGG CATGGTGATG
CACGCCGACG GTGGCTATCT CGGTTCCAAG CCCTACTGCG CCAGCGGCCA GTACATCAAG
CGCATGTCCA ACCATTGCCA GGGCTGCAGC TACAAGGTGA GCGAGAGCAC CGGGGAGGCG
GCCTGTCCGT TCAACGCACT GTACTGGCAC TTCCTCATGC GCCACCGCGA GCGGCTGGAG
CGCAACCCGC GCATGGGCAT GGTCTACCGC AACCTGGCGC GGATGAACGA GGCCAGGCAG
CGGGCGCTGT GGGACTGGGG CGAGCGCCTG CTGGCCAGGC TCGATGCGGG AGAGGTGTTG
TGA
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| Protein sequence | MSAAPGPADS GTRRLILVLG DQLTPALGAL AQIDARHDRV LLAEVMEEAS HVPHHPKKIA
LIFSAMRHFA EALRTQGIQV HYVTLDDPDN SGSLPGELQR WTQRLNPAEV HLTECGDWRL
EQSLRHCGVP IHWHQDSRFL CTREAFAAWA KDRKQLRMEF FYREMRRTSG LLLNPDGTPE
GGAWNFDADN RKALPKEVRP PTAWRIEPDA ITHEVLALVG QRFTEHYGSL EGFDYPVTAE
QAERLWQHFL ANGLAEFGDY QDAMADDEPF LFHSRISAAL NIGLLDLRRV CAEVEAAYRA
GDVPLNAAEG FIRQLIGWRE YVRGIYWLRM PEYAEGNAFG NSRALPEFYW TGRTRMNCMR
QAIGQTLEHA YAHHIQRLMV TGNFALLAGI APKAICGWYL AVYMDAFDWV ELPNTLGMVM
HADGGYLGSK PYCASGQYIK RMSNHCQGCS YKVSESTGEA ACPFNALYWH FLMRHRERLE
RNPRMGMVYR NLARMNEARQ RALWDWGERL LARLDAGEVL
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