| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_15641 |
|---|
| Symbol | |
|---|
| ID | 4780521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | + |
|---|
| Start bp | 1269802 |
|---|
| End bp | 1271292 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 640084846 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001015386 |
|---|
| Protein GI | 124026270 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3046] Uncharacterized protein related to deoxyribodipyrimidine photolyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.681049 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGAAAGA TTTTCCTGAT TTTTCCAAAT CAATTATTCA AAATAAAAAA ACAATTTACT
GACGTTAGTC ATATTGCTCT GATCCAAGAT AGCTTATTTT TTGGTTGTGA TTCTCAATGG
CAACAAAAGT TTCATTGTAA CAAAATAATT TTCCACAAAG CTACTATGGA CTCTTACGAA
GAAGATCTCA AATCTCAGGG GTTCAATGTA ATTTATTTAA AACATCAAAG AGAAAGCAGA
ACAGAAGATA ATCTCAATTA TCTCTCAGAA AAAGGTTTTA ACTATTTCAT CACTTATGAA
GCGTTTGATT GGTCGCTAGA AAAAAGAATT AAGGATTTCT CTTTGAAAAA GAATATCAAG
TTGGAAATAA GAAAAAATGA TATGTTTTTA ACTTGTAAAG ATATATCTGA AGAAATACTT
AATCAAAAAA AAATTTATGG AATGCAGAAA TTTTATAAGA TTCAAAGAAA AAGCCTAAAT
ATACTTATCG AAAAAGATGG TTCGCCAACA GGGGGGACAT GGAGTTTTGA CAAAATGAAC
AGAAAGAAGC TTCCAAATTC AATTGAAGTT CCTAGAATAC CAACTATAAA AACAAGCAGA
TTACTAGATA AAGCTAAGAA AGAAGTTTCT ATAAATTATA AAGATTATTA TGGGAGCACA
GAAAACTTTA ATTATCCATT GTCTCATAAA GATGCTGAAG AATGGTTAGA TAATTTTTTA
ATTGAAAGAT TTAATTTATT TGGAGATTAT GAAGATGCAA TACATTCAAA TCATAGGACA
CTTTGGCATA GTGTTCTTTC TCCATTAATT AATTCCGGAT TACTTACTCC GAGACAAATA
ATAGATAAAT CATGGGAGTT TTATCAATCA AACAATATTG GGATTAATTG CTATGAAGGA
TTTGTTAGAC AAATTATTGG CTGGCGTGAA TTTATCCTAT TAATGTATAA ACGAAATAGT
TTAGAACTAA GAAATGGAAA TTTCTGGGAT TTTGAGGACA AACCAATACC CTTAAGTTTT
TACACTGGTC AAACAGGAAT AAGGCCTTTA GATGACTCAA TAAAAAATAT TTTAGAGACA
GGATATGCTC ATCATATAGA AAGACTAATG ATAGTTGGAA ATTTAATGCT TCTATGCAGA
TTTCATCCAA ATCAAGTATA CAAATGGTTT ATGGAATTAT TTATAGATTC ATATGATTGG
GTTATGGTTC CAAATGTTTA TGGAATGAGT CAATTTTCAG ATGGAGGACT ATTTACAACC
AAACCATATA TTTCTGGCTC TAATTATATT CGAAAAATGT CTAACTATAA ATCTGAAGAT
TGGTGCTCAA CTTGGGATAG TCTTTTTTGG ACATTTATAG ATGATTATAA AAATAAGTTC
AAGGACCAAT ATCGTTTGTC AATGATTTTA AGGAATTTAG AAAAAATGGA CCCTAATAAA
AAAATGAACC ACAGACGTAA TGCTAATGAA TTCTTGTCTA AACTAAATTA A
|
|---|
| Protein sequence | MRKIFLIFPN QLFKIKKQFT DVSHIALIQD SLFFGCDSQW QQKFHCNKII FHKATMDSYE
EDLKSQGFNV IYLKHQRESR TEDNLNYLSE KGFNYFITYE AFDWSLEKRI KDFSLKKNIK
LEIRKNDMFL TCKDISEEIL NQKKIYGMQK FYKIQRKSLN ILIEKDGSPT GGTWSFDKMN
RKKLPNSIEV PRIPTIKTSR LLDKAKKEVS INYKDYYGST ENFNYPLSHK DAEEWLDNFL
IERFNLFGDY EDAIHSNHRT LWHSVLSPLI NSGLLTPRQI IDKSWEFYQS NNIGINCYEG
FVRQIIGWRE FILLMYKRNS LELRNGNFWD FEDKPIPLSF YTGQTGIRPL DDSIKNILET
GYAHHIERLM IVGNLMLLCR FHPNQVYKWF MELFIDSYDW VMVPNVYGMS QFSDGGLFTT
KPYISGSNYI RKMSNYKSED WCSTWDSLFW TFIDDYKNKF KDQYRLSMIL RNLEKMDPNK
KMNHRRNANE FLSKLN
|
|---|
| |