Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3641 |
Symbol | |
ID | 3936119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 3713930 |
End bp | 3715456 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637906017 |
Product | deoxyribodipyrimidine photolyase-related protein |
Protein accession | YP_511583 |
Protein GI | 89056132 |
COG category | [R] General function prediction only |
COG ID | [COG3046] Uncharacterized protein related to deoxyribodipyrimidine photolyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.175337 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCCGC GCGTTGTCCT CATCCTTGGT GACCAACTCT GCCGCGATGG TGCTGCCCTG CGTGAAGCCG ACCGTGATCG TGACGTCGTT CTGATGGCCG AGGTTGCGGA GGAGGCCGGT TATGTCCCGC ACCACCCCAA GAAAATCGCC TTCCTGTTCG CCGCCATGCG CAAATTCGCC GCCGCGTTGC GCGATGACGG CTGGCAAGTG CGCTACACCA AGCTGGACGA CGCCGAGAAT GCCGGCTCCA TCCCCGGCGA AATCCTTCGG GCCTGTGAGG CCACCGGTGC GGCCGAGGTT CTGGCCACCG AGCCCGGCGA ATTCCGCCTG ATCGCGGCGC TGGAAGACAT GCCGATCCCT GTCCACCAAT TCCCCGATGA CCGATTTTTG TGCTCCCACG CCGAATTTGC GGCCTGGGCA GAAGGCCGCA AGGAATTGCG GATGGAGTGG TTCTACCGCG AGATGCGCCG CAAAACGGGC CTTCTGATGG ACGGGGACAA GCCCGAAGGC GGCAAGTGGA ACTATGACCA CGACAACCGC GAACCGCCCC CCGGGTCCGT CGATGCCGCG CCAATGCACT TCACACCGGA TGACGTGACC GAAGAGGTCC TGACCCTGGT GGCATCCCGC TTCCATAACA ACTTCGGGAC GCTTACGCCG TTCTGGTTTG CCACCGACAC GGGCCAGGCC CGCCGTGCGT TGGCCCATTG GGTCAAGACG GCGTTGCCCC GGTTCGGCGA TTTTCAGGAT GCGATGATGC AGGGGGAACG GTTCCTCTAT CACTCTATCA TCTCTATGTA TCTGAACGCG GGCCTTCTGG GCTGGCGTGA GATCTGCGAC GCGGCTGAGC AGGCCTACCG CGACGGTGAC GCGCCGCTGA ATGCCGTCGA GGGCTTCATC CGCCAGATCA TCGGTTGGCG CGAATATATG CGTGGTATCT ATTTCCTTGA GGGCCCGGAC TACACGTCCC GCAACACGCT TAAACATACC CGGGATCTGC CCGGCTTCTA CTGGTCGGGT GAGACCGACA TGTTGTGCCT GTCGGAGGCC ATCACCCAGA CGCGCGAGGA GGCCTATGCC CACCACATCC AGCGCCTGAT GGTCACGGGC AATTTCGCGC TTCTGGCAGG CGTCGATCCT CATCAGGTTC ACGAATGGTA TCTGGCCGTC TACGCGGACG CTTACGAATG GGTGGAGGCC CCCAATGTGA TCGGCATGAG CCAGTTTGCC GACGGTGGCG TGGTCGGGTC CAAACCCTAC GTGTCGGGCG GCAACTACAT CAACAAGATG TCGGATTACT GCAAATCCTG CGCCTATTCG GTGAAGGAAA AAACGGGGGA GGGCGCGTGC CCGTTCAATG CGCTCTACTG GCATTTCCTG ATGCGCCACG AGGACCGCTT CGCCAAGAAC CCCCGCATGG CGCAGATGTA CCGCACCTTC GCGCGGATGG ATGACAGCAA ACAGGCCGAT ACACTGGCGA GTGCCGATGC GTTTCTGGCG AAATTGGATC GGGGCGCGAA GGTCTGA
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Protein sequence | MKPRVVLILG DQLCRDGAAL READRDRDVV LMAEVAEEAG YVPHHPKKIA FLFAAMRKFA AALRDDGWQV RYTKLDDAEN AGSIPGEILR ACEATGAAEV LATEPGEFRL IAALEDMPIP VHQFPDDRFL CSHAEFAAWA EGRKELRMEW FYREMRRKTG LLMDGDKPEG GKWNYDHDNR EPPPGSVDAA PMHFTPDDVT EEVLTLVASR FHNNFGTLTP FWFATDTGQA RRALAHWVKT ALPRFGDFQD AMMQGERFLY HSIISMYLNA GLLGWREICD AAEQAYRDGD APLNAVEGFI RQIIGWREYM RGIYFLEGPD YTSRNTLKHT RDLPGFYWSG ETDMLCLSEA ITQTREEAYA HHIQRLMVTG NFALLAGVDP HQVHEWYLAV YADAYEWVEA PNVIGMSQFA DGGVVGSKPY VSGGNYINKM SDYCKSCAYS VKEKTGEGAC PFNALYWHFL MRHEDRFAKN PRMAQMYRTF ARMDDSKQAD TLASADAFLA KLDRGAKV
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