| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3077 |
|---|
| Symbol | |
|---|
| ID | 3721353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007494 |
|---|
| Strand | - |
|---|
| Start bp | 119537 |
|---|
| End bp | 121063 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640072753 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_354594 |
|---|
| Protein GI | 77465091 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3046] Uncharacterized protein related to deoxyribodipyrimidine photolyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACACGGC TCATCCTCGT GCTGGGCGAC CAGCTCAGCG ACGATCTTCC GGCGCTGCGG
GCGGCGGATC CGGCCGCAGA TCTCGTGGTC ATGGCCGAGG TGATGGAGGA GGGCACCTAT
GTCCCGCACC ATCCGCAGAA GATCGCCCTG ATCCTGGCCG CCATGCGCAA GTTCGCCCGC
CGCCTGCAGG AACGCGGCTT CCGCGTGGCC TATTCCCGGC TGGACGATCC CGACACCGGA
CCCTCGATCG GGGCCGAGCT CCTGCGGCGG GCCGCAGAGA CCGGCGCCCG CGAGGCGGTC
GCGACCCGGC CCGGCGACTG GCGGCTGATC GAAGCGCTCG AGGCCATGCC CCTGCCCGTC
CGCTTCCTGC CCGACGACCG GTTCCTCTGC CCGGCAGACG AGTTCGCCCG CTGGACCGAG
GGACGCAAGC AGCTGCGCAT GGAGTGGTTC TATCGCGAGA TGCGCCGCAG GACCGGCCTC
CTGATGGAGG GGGACGAGCC CGCGGGCGGG AAGTGGAACT TCGACACAGA GAACCGCAAG
CCCGCGGCGC CCGACCTGCT GCGTCCGCGG CCGCTGCGGT TCGAGCCCGA TGCCGAGGTG
CGCGCGGTAC TCGACCTCGT CGAGGCGCGC TTTCCGCGCC ATTTCGGGCG GCTCCGCCCG
TTCCACTGGG CCACCGACCG GGCCGAGGCG CTTCGGGCGC TCGATCACTT CATCCGCGAA
AGCCTGCCGC GCTTCGGCGA CGAGCAGGAT GCGATGCTCG CCGACGATCC GTTCCTGAGC
CATGCGCTCC TGTCCTCGTC GATGAACCTC GGGCTTCTCG GGCCGATGGA GGTCTGCCGC
CGCGCCGAGA CCGAGTGGCG CGAGGGCCGC GCGCCGCTGA ACGCGGTCGA GGGCTTCATC
CGGCAGATCC TCGGCTGGCG GGAGTATGTG CGGGGGATCT GGACGCTCTC GGGGCCGGAT
TACATACGCT CGAACGGGCT CGGCCACAGC GCCGCCCTGC CGCCGCTCTA CTGGGGCAAG
CCCACGCGGA TGGCGTGCCT CTCCGCCGCG GTCGCCCAGA CCCGCGATCT CGCCTATGCC
CACCACATCC AGCGGCTGAT GGTGACGGGC AATTTCGCGC TGCTGGCGGG CGTCGATCCC
GCCGAGGTGC ACGAATGGTA TCTCTCGGTC TATATCGATG CGCTGGAATG GGTCGAGGCG
CCGAACACGA TCGGGATGAG CCAGTTCGCC GATCACGGGC TCCTCGGCTC GAAACCCTAT
GTCTCGTCCG GCGCCTATAT CGACCGGATG TCGGATTACT GCCGCGGCTG CGCCTATGCG
GTGAAGGACC GGACGGGACC CCGCGCCTGC CCCTTCAACC TGCTCTACTG GCACTTCCTG
AACCGGCACC GCGCGCGGTT CGAGCGCAAC CCCCGCATGG TCCAGATGTA TCGCACCTGG
GACCGGATGG AGGAGACCCA TCGCGCGCGG GTTCTGACCG AGGCGGAGGC CTTCCTCGGG
CGGCTCCACG CGGGCGAGCC GGTCTGA
|
|---|
| Protein sequence | MTRLILVLGD QLSDDLPALR AADPAADLVV MAEVMEEGTY VPHHPQKIAL ILAAMRKFAR
RLQERGFRVA YSRLDDPDTG PSIGAELLRR AAETGAREAV ATRPGDWRLI EALEAMPLPV
RFLPDDRFLC PADEFARWTE GRKQLRMEWF YREMRRRTGL LMEGDEPAGG KWNFDTENRK
PAAPDLLRPR PLRFEPDAEV RAVLDLVEAR FPRHFGRLRP FHWATDRAEA LRALDHFIRE
SLPRFGDEQD AMLADDPFLS HALLSSSMNL GLLGPMEVCR RAETEWREGR APLNAVEGFI
RQILGWREYV RGIWTLSGPD YIRSNGLGHS AALPPLYWGK PTRMACLSAA VAQTRDLAYA
HHIQRLMVTG NFALLAGVDP AEVHEWYLSV YIDALEWVEA PNTIGMSQFA DHGLLGSKPY
VSSGAYIDRM SDYCRGCAYA VKDRTGPRAC PFNLLYWHFL NRHRARFERN PRMVQMYRTW
DRMEETHRAR VLTEAEAFLG RLHAGEPV
|
|---|
| |