| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2689 |
|---|
| Symbol | |
|---|
| ID | 8412240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 2574138 |
|---|
| End bp | 2575664 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645021035 |
|---|
| Product | deoxyribodipyrimidine photolyase-related protein |
|---|
| Protein accession | YP_003178502 |
|---|
| Protein GI | 257388729 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3046] Uncharacterized protein related to deoxyribodipyrimidine photolyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.14747 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTGC TGGTGCTGGG CGACCAGCTG TCCCGGCGAT TCGGTCCACT CGCCGACCGG
CCCGACGACC GCGTGGTGAT GATCGAGTCC AGCGGTTTCC TCCGTCGGTT ACCCTACCAT
CCGCACAAGC CGACGCTCGT GTTCAGTGCG ATGCGTCACT TCCGGGACGC GTTGCGCGAG
GCGGGCCGGA CCGTCGACTA CTACCGAGCG GAGACGTTCG AGGACGGGTT CGAGACACAC
TTCGAGCGAC ATCCCGACGA CGATCTCGTG ACGATGACCC CGGCGAGTCA CGGCGGCACC
GAGCGGCTGC GGACGCTGAT CGAGCGACAC GGCGGGACGC TCACGACGGT GCCGGACGAG
CGGTTCCTCT GTGCGCCAGG GACGTTCGAC GAGTGGACGG ACGGTCCGCC GTACCGTCAC
GAGTCGTTCT ACCGATCGAT GCGTCGGGAG ACCGGCTATC TGATGGACGG CGACGACCCG
GTCGGTGGCG AGTGGAACTA CGACGAGCAG AACCGCGAGA CGCCGCCCGA CGAGTGGGAG
CCCCCGACGG TGCCGACGTT CGAGCCCGAC GAGACGACGC GTCGGGTCCA GTCGTGGGTC
CGCGACCACC ACGACGGAGG CTACGAGGAA GCGCCCTACG GCGGTGACTG GGCCGATCCG
GAGCCGTTCC GGTGGCCGGT GACGCGACAG CAAGCCCGCC GAGCGCTGGA CGCGTTCGTC
GAGGACCGCC TCGCCGACTT CGGGGCGTAT CAGGACGCGA TGGTCGAGAG CGAGTGGGCG
ATGGCTCACA GCCTGCTGTC GACTTCGCTG AACCTCGGAC TGCTGGGGCC CGCGGAGGTC
GTCGAGCGCG CGATCGAGGC CTACGAGGCC GGCGACGCAC CGCTGCACAG CGTCGAGGGG
TTCGTCCGGC AGGTGATCGG GTGGCGGGAG TTCGTCCGGC ACGTCTACCG TCGGGAGATG
CCCGAGCTGG CGACGGCGAA CCAGCTCGGT GCGAGCGAAG ACCTCCCGGC GTTCTTCTGG
ACGGGCGAGA CGGACATGGC CTGTCTGGAC GCGGCCATCG ACGGCGTTCG CAAGCGGGGC
TACGCACACC ACATCGAGCG GCTCATGCTG CTCTCGAACT TCTCGCTGCT GCTCGGTGTC
GAGCCCGCAC AGCTCAACCG CTGGTTCCAC GCCGGCTACG TCGACGCCTT CCACTGGGTC
ACGACGCCAA ACGTCGTCGA GATGGGGCTG TACGGCTCTG GCGCGTTCGC CACGAAGCCC
TACGCCGCCT CGGCGAACTA CGTCGACAAG ATGAGCGACC ACTGCAGCGA CTGTCAGTAC
TACAAGACGA AGACGACCGG AGAGCGAGCG TGTCCGTTCA ACACGCTGTA CTGGGACTTT
CTGGACCGCA ACGAGTCACA GCTCCGGTCG AACCACCGGA TGGGGCTCGT CTACAGCCAC
CTCGACGACA AGGACGACGA CCAGCTGACG GCGATCCGAC AGCGAGCGGA CGAACTGCGG
ACGCGAGCCG CCGACAGCGA GCTGTGA
|
|---|
| Protein sequence | MTVLVLGDQL SRRFGPLADR PDDRVVMIES SGFLRRLPYH PHKPTLVFSA MRHFRDALRE
AGRTVDYYRA ETFEDGFETH FERHPDDDLV TMTPASHGGT ERLRTLIERH GGTLTTVPDE
RFLCAPGTFD EWTDGPPYRH ESFYRSMRRE TGYLMDGDDP VGGEWNYDEQ NRETPPDEWE
PPTVPTFEPD ETTRRVQSWV RDHHDGGYEE APYGGDWADP EPFRWPVTRQ QARRALDAFV
EDRLADFGAY QDAMVESEWA MAHSLLSTSL NLGLLGPAEV VERAIEAYEA GDAPLHSVEG
FVRQVIGWRE FVRHVYRREM PELATANQLG ASEDLPAFFW TGETDMACLD AAIDGVRKRG
YAHHIERLML LSNFSLLLGV EPAQLNRWFH AGYVDAFHWV TTPNVVEMGL YGSGAFATKP
YAASANYVDK MSDHCSDCQY YKTKTTGERA CPFNTLYWDF LDRNESQLRS NHRMGLVYSH
LDDKDDDQLT AIRQRADELR TRAADSEL
|
|---|
| |