| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_2924 |
|---|
| Symbol | |
|---|
| ID | 4111756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 3080381 |
|---|
| End bp | 3081958 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638032049 |
|---|
| Product | deoxyribodipyrimidine photolyase-related protein |
|---|
| Protein accession | YP_640087 |
|---|
| Protein GI | 108799890 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3046] Uncharacterized protein related to deoxyribodipyrimidine photolyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGGATTC GTACGCGACA CGCCGAGGAC AGCGTATGGC GTCGCACACT CGAGCCCACC
CAGCGCCCGC CTCGTAGCCT CGAAGAGGTG ACCGGTACGC GTGACGACAC CCCACTGTGG
CTCTTCGCCG ACCAACTCGG CCCGGCCGTC CACGGCGGCG AGCACGCCCA CCGCGACGTG
CTGCTCATCG AGGCCGACCA CGCCCTGCGC AAGCGCCGCT ACCACCGCCA GAAACTGCAC
ATCGTGCTGT CCGCGCTGCG CCACGCCGAC CGCGACCTCG GCGACCGCGC CACCCTCCTC
CGCTCCGAGA CCTACACCGA CGCGCTCGAA CGCTACGGCC GGCCCGTCCT CGTCCACGAG
CCGACGTCCT TCGCCGCCGA GAGGTTCGTC CACCGCCTCA AACAGCGTGG CCTCGTCGCC
GACATCCTGC CCACCCCGAC ATTCGCGTTG CCGCGCAAGG ACTTCGAACA GTGGGCCGGG
AACCGCACCC GGTTCCGCAT GGAGGACTTC TACCGCGACC AACGCCGCCG CTTCGACGTC
CTGATGAGCG GGGCCGATCC CGTCGGCAAC CGGTGGAACT ACGACGAGGA GAACCGCCAC
TCCCCACCGA AGAAGCGGCG CACCCTCGAC GTGCCCGCGC CGTACAAGCC CCGCGAGGAC
GACATCGACG AAGAGGTCCG CCGCGACCTC GACCGGATGG ACCTCGACAC CGTCGGCGCC
GACGGCCCCC GCCTGTTCGC CGTCACACCC GCCGAAGCCA AACGCGCCCT CACCCGCTTC
ATCGAGCACC GCCTGCCGAC CTTCGGCGAC TACGAGGACG CGATGATGGG CGAGGACTGG
GCGATGTCGC ACTCACTGTT GTCGGTGCCG CTCAACCTCG GCGTGCTCCA CCCCCTCGAC
GCCGTGTACG CCGCCGAACA GGCCTACCGC GACGGGACCG CGCCGCTGGC TGCCGTCGAG
GGGTTCATCC GCCAGATCCT CGGCTGGCGC GAGTACATGT GGCATCTCTA CTGGCATTTC
GGCGAGCGGT ACGTCGACAG CAACGAACTC GACGCCAGGA CACCGCTTCC GGACTGGTGG
GCCGACCTCG ACGCCGACGC CGTGACCGCC GAATGCCTGC GCCACGCGCT GATGGGGCTT
CGTGACCGGG GCTGGACGCA CCACATCCAG CGGCTGATGA TCCTCGGCAG CCACGCCCTG
CAGCGCGGAT ACCACCCTCG CGAACTCACC GAGTGGTACG CCACCGCCTA CGTCGACGGC
TTCCGCTGGG TCATGCCCAC CAACGTCGTC GGGATGAGCC AGCACGCCGA CGGTGGCATG
CTCGCCACCA AGCCGTACAC CTCCGGCGGC GCCTACATCA ACAAGATGAG CGACCACTGC
GGCGACTGCG CCTACGACCC GCGTAAACGC CTCGGCGAGG ACGCCTGCCC GTTCACGGCC
GGCTACTGGG CCTTCGTGCA CCGCCACCGC GACCGGCTCG AGCGCAACAT GCGCACCCGC
CGGGCGGTAC AGGGGTTGAA CCGGCTCGGC GACCTCGAGG ACGTCCTCGC CCAGGAGGAC
AAGCGCACAC GGTTCTAG
|
|---|
| Protein sequence | MRIRTRHAED SVWRRTLEPT QRPPRSLEEV TGTRDDTPLW LFADQLGPAV HGGEHAHRDV
LLIEADHALR KRRYHRQKLH IVLSALRHAD RDLGDRATLL RSETYTDALE RYGRPVLVHE
PTSFAAERFV HRLKQRGLVA DILPTPTFAL PRKDFEQWAG NRTRFRMEDF YRDQRRRFDV
LMSGADPVGN RWNYDEENRH SPPKKRRTLD VPAPYKPRED DIDEEVRRDL DRMDLDTVGA
DGPRLFAVTP AEAKRALTRF IEHRLPTFGD YEDAMMGEDW AMSHSLLSVP LNLGVLHPLD
AVYAAEQAYR DGTAPLAAVE GFIRQILGWR EYMWHLYWHF GERYVDSNEL DARTPLPDWW
ADLDADAVTA ECLRHALMGL RDRGWTHHIQ RLMILGSHAL QRGYHPRELT EWYATAYVDG
FRWVMPTNVV GMSQHADGGM LATKPYTSGG AYINKMSDHC GDCAYDPRKR LGEDACPFTA
GYWAFVHRHR DRLERNMRTR RAVQGLNRLG DLEDVLAQED KRTRF
|
|---|
| |