89 homologs were found in PanDaTox collection
for query gene BBta_2956 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009485  BBta_2956  hypothetical protein  100 
 
 		 508 aa  1050    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.888276  normal  0.195961 
 
 
-
 
NC_010524  Lcho_1250  deoxyribodipyrimidine photolyase-related protein  53.06 
 
 		 513 aa  506  9.999999999999999e-143  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000733779 
 
 
-
 
NC_009484  Acry_1728  deoxyribodipyrimidine photolyase-related protein  52.71 
 
 		 513 aa  506  9.999999999999999e-143  Acidiphilium cryptum JF-5  Bacteria  normal  0.483675  n/a   
 
 
-
 
NC_007492  Pfl01_2809  deoxyribodipyrimidine photolyase-like protein  48.91 
 
 		 512 aa  498  1e-140  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007005  Psyr_1785  deoxyribodipyrimidine photolyase-like protein protein  49 
 
 		 519 aa  495  1e-139  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  hitchhiker  0.00721619 
 
 
-
 
NC_004578  PSPTO_3689  hypothetical protein  49.11 
 
 		 512 aa  494  9.999999999999999e-139  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.116484  n/a   
 
 
-
 
NC_008752  Aave_4518  deoxyribodipyrimidine photolyase-related protein  51.65 
 
 		 533 aa  490  1e-137  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_1204  deoxyribodipyrimidine photolyase-related protein  49.01 
 
 		 520 aa  487  1e-136  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.000923921  normal  1 
 
 
-
 
NC_011901  Tgr7_1396  DNA photolyase  48.83 
 
 		 524 aa  484  1e-135  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.64137  n/a   
 
 
-
 
NC_013422  Hneap_1235  deoxyribodipyrimidine photolyase-related protein  47.66 
 
 		 511 aa  483  1e-135  Halothiobacillus neapolitanus c2  Bacteria  decreased coverage  0.00923753  n/a   
 
 
-
 
NC_008825  Mpe_A2055  putative alpha-deoxyribodipyrimidine photolyase-related protein  52.28 
 
 		 510 aa  480  1e-134  Methylibium petroleiphilum PM1  Bacteria  normal  0.527245  normal  1 
 
 
-
 
NC_008740  Maqu_3101  deoxyribodipyrimidine photolyase-related protein  48.92 
 
 		 510 aa  479  1e-134  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_014148  Plim_3755  deoxyribodipyrimidine photolyase-related protein  45.4 
 
 		 532 aa  478  1e-133  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
-
 
NC_007963  Csal_0896  deoxyribodipyrimidine photolyase-related protein  50.1 
 
 		 524 aa  476  1e-133  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_5626  deoxyribodipyrimidine photolyase-related protein  49.9 
 
 		 534 aa  473  1e-132  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.147008  normal  0.0556848 
 
 
-
 
NC_010511  M446_5454  deoxyribodipyrimidine photolyase-related protein  51.57 
 
 		 533 aa  471  1.0000000000000001e-131  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.120235 
 
 
-
 
NC_009952  Dshi_0599  deoxyribodipyrimidine photolyase-related protein  47.93 
 
 		 508 aa  459  9.999999999999999e-129  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.315159  normal  1 
 
 
-
 
NC_007794  Saro_2394  deoxyribodipyrimidine photolyase-related protein  48.79 
 
 		 522 aa  456  1e-127  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_009512  Pput_3022  deoxyribodipyrimidine photolyase-related protein  46.71 
 
 		 508 aa  454  1.0000000000000001e-126  Pseudomonas putida F1  Bacteria  normal  0.619117  normal  1 
 
 
-
 
NC_002947  PP_2732  hypothetical protein  46.31 
 
 		 508 aa  451  1e-125  Pseudomonas putida KT2440  Bacteria  normal  0.380402  normal  1 
 
 
-
 
NC_010501  PputW619_2999  deoxyribodipyrimidine photolyase-related protein  46.41 
 
 		 513 aa  446  1.0000000000000001e-124  Pseudomonas putida W619  Bacteria  normal  1  normal  0.248063 
 
 
-
 
NC_007802  Jann_3641  deoxyribodipyrimidine photolyase-related protein  47.31 
 
 		 508 aa  447  1.0000000000000001e-124  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.175337 
 
 
-
 
NC_006369  lpl0260  hypothetical protein  44.12 
 
 		 512 aa  447  1.0000000000000001e-124  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009050  Rsph17029_3804  deoxyribodipyrimidine photolyase-related protein  47.81 
 
 		 508 aa  442  1e-123  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.206805 
 
 
-
 
NC_008044  TM1040_2281  deoxyribodipyrimidine photolyase-related protein  46.53 
 
 		 507 aa  439  9.999999999999999e-123  Ruegeria sp. TM1040  Bacteria  normal  1  normal  0.558867 
 
 
-
 
NC_008347  Mmar10_1000  deoxyribodipyrimidine photolyase-related protein  46.09 
 
 		 511 aa  439  9.999999999999999e-123  Maricaulis maris MCS10  Bacteria  normal  0.760695  normal  1 
 
 
-
 
NC_007494  RSP_3077  hypothetical protein  48.77 
 
 		 508 aa  439  9.999999999999999e-123  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013889  TK90_0821  deoxyribodipyrimidine photolyase-related protein  45.82 
 
 		 525 aa  440  9.999999999999999e-123  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.627102  normal  0.414989 
 
 
-
 
NC_009429  Rsph17025_3928  BCCT transporter  48.31 
 
 		 508 aa  424  1e-117  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.240048  normal  0.840759 
 
 
-
 
NC_011138  MADE_02017  deoxyribodipyrimidine photolyase-related protein  40.51 
 
 		 512 aa  419  1e-116  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.571234  n/a   
 
 
-
 
NC_009379  Pnuc_1608  deoxyribodipyrimidine photolyase-related protein  42.16 
 
 		 511 aa  397  1e-109  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_014230  CA2559_07801  deoxyribodipyrimidine photolyase related protein  38.39 
 
 		 511 aa  396  1e-109  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.179708  n/a   
 
 
-
 
NC_008255  CHU_1054  hypothetical protein  40.94 
 
 		 521 aa  381  1e-104  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  0.624164 
 
 
-
 
NC_013457  VEA_000795  DNA photolyase  38.96 
 
 		 514 aa  368  1e-100  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_009784  VIBHAR_06692  hypothetical protein  39.16 
 
 		 514 aa  365  1e-100  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_0335  deoxyribodipyrimidine photolyase-related protein  39.07 
 
 		 522 aa  368  1e-100  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_3526  deoxyribodipyrimidine photolyase-related protein  39.61 
 
 		 525 aa  366  1e-100  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008322  Shewmr7_0429  deoxyribodipyrimidine photolyase-related protein  39.41 
 
 		 525 aa  366  1e-100  Shewanella sp. MR-7  Bacteria  normal  0.50429  normal  1 
 
 
-
 
NC_008345  Sfri_0777  deoxyribodipyrimidine photolyase-related protein  39.69 
 
 		 528 aa  367  1e-100  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_3704  deoxyribodipyrimidine photolyase-related protein  39.61 
 
 		 525 aa  366  1e-100  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009438  Sputcn32_0524  deoxyribodipyrimidine photolyase-related protein  39.41 
 
 		 521 aa  368  1e-100  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_004347  SO_4169  hypothetical protein  39.41 
 
 		 521 aa  364  2e-99  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013124  Afer_2012  deoxyribodipyrimidine photolyase-related protein  43.11 
 
 		 502 aa  364  2e-99  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_0441  deoxyribodipyrimidine photolyase-related protein  40.16 
 
 		 525 aa  364  2e-99  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_3318  deoxyribodipyrimidine photolyase-related protein  42.06 
 
 		 497 aa  363  4e-99  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.420687  hitchhiker  0.00000494763 
 
 
-
 
NC_010087  Bmul_5845  deoxyribodipyrimidine photolyase-related protein  42.29 
 
 		 509 aa  363  6e-99  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007604  Synpcc7942_1171  hypothetical protein  39.36 
 
 		 503 aa  362  9e-99  Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009052  Sbal_3872  deoxyribodipyrimidine photolyase-related protein  40.66 
 
 		 521 aa  362  9e-99  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_0458  deoxyribodipyrimidine photolyase-related protein  40.94 
 
 		 521 aa  360  2e-98  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010717  PXO_01727  deoxyribodipyrimidine photolyase-related protein  40.8 
 
 		 525 aa  360  4e-98  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011729  PCC7424_4487  deoxyribodipyrimidine photolyase-related protein  37.57 
 
 		 506 aa  358  9.999999999999999e-98  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_008709  Ping_1551  deoxyribodipyrimidine photolyase-related protein  39.49 
 
 		 516 aa  358  1.9999999999999998e-97  Psychromonas ingrahamii 37  Bacteria  normal  0.585368  normal  0.610204 
 
 
-
 
NC_011663  Sbal223_0467  deoxyribodipyrimidine photolyase-related protein  40.16 
 
 		 521 aa  355  7.999999999999999e-97  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_0531  deoxyribodipyrimidine photolyase-related protein  43.25 
 
 		 511 aa  355  1e-96  Thauera sp. MZ1T  Bacteria  normal  0.548466  n/a   
 
 
-
 
NC_009767  Rcas_4251  deoxyribodipyrimidine photolyase-related protein  40.32 
 
 		 508 aa  351  2e-95  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013202  Hmuk_2689  deoxyribodipyrimidine photolyase-related protein  41.26 
 
 		 508 aa  347  4e-94  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  0.14747 
 
 
-
 
NC_009523  RoseRS_0009  deoxyribodipyrimidine photolyase-related protein  40.72 
 
 		 508 aa  346  5e-94  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0417103 
 
 
-
 
NC_013946  Mrub_2169  deoxyribodipyrimidine photolyase-related protein  41.13 
 
 		 498 aa  344  2e-93  Meiothermus ruber DSM 1279  Bacteria  normal  0.752806  normal  1 
 
 
-
 
NC_011884  Cyan7425_3982  deoxyribodipyrimidine photolyase-related protein  39.72 
 
 		 507 aa  343  4e-93  Cyanothece sp. PCC 7425  Bacteria  normal  1  hitchhiker  0.00134489 
 
 
-
 
NC_011312  VSAL_I1806  hypothetical protein  38.14 
 
 		 523 aa  342  7e-93  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.501424  n/a   
 
 
-
 
NC_009456  VC0395_0425  hypothetical protein  39.8 
 
 		 516 aa  339  5.9999999999999996e-92  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000280647  n/a   
 
 
-
 
NC_010506  Swoo_3929  deoxyribodipyrimidine photolyase-related protein  37.76 
 
 		 531 aa  333  3e-90  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008700  Sama_2497  hypothetical protein  36.05 
 
 		 569 aa  324  2e-87  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013158  Huta_0265  deoxyribodipyrimidine photolyase-related protein  39.25 
 
 		 510 aa  305  1.0000000000000001e-81  Halorhabdus utahensis DSM 12940  Archaea  normal  0.319874  n/a   
 
 
-
 
NC_009664  Krad_3082  deoxyribodipyrimidine photolyase-related protein  39.48 
 
 		 510 aa  280  6e-74  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.47785  normal  0.0294382 
 
 
-
 
NC_013440  Hoch_2030  deoxyribodipyrimidine photolyase-related protein  36.59 
 
 		 519 aa  276  7e-73  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0662893  normal  0.30492 
 
 
-
 
NC_013223  Dret_1823  deoxyribodipyrimidine photolyase-related protein  34.86 
 
 		 502 aa  268  2e-70  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0760009  normal  1 
 
 
-
 
NC_013757  Gobs_0647  deoxyribodipyrimidine photolyase-related protein  37.69 
 
 		 528 aa  265  2e-69  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_2791  deoxyribodipyrimidine photolyase-related protein  39.71 
 
 		 500 aa  263  6.999999999999999e-69  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000121396  hitchhiker  0.0000216403 
 
 
-
 
NC_009338  Mflv_3490  deoxyribodipyrimidine photolyase-related protein  33.75 
 
 		 505 aa  259  8e-68  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.189609 
 
 
-
 
NC_013132  Cpin_7174  deoxyribodipyrimidine photolyase-related protein  32.86 
 
 		 492 aa  256  6e-67  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_3270  deoxyribodipyrimidine photolyase-related protein  33.33 
 
 		 494 aa  256  8e-67  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.737297  normal  1 
 
 
-
 
NC_008146  Mmcs_2924  deoxyribodipyrimidine photolyase-related protein  32.86 
 
 		 525 aa  252  1e-65  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_2968  deoxyribodipyrimidine photolyase-related protein  32.86 
 
 		 525 aa  252  1e-65  Mycobacterium sp. KMS  Bacteria  normal  0.278599  normal  1 
 
 
-
 
NC_009077  Mjls_2939  deoxyribodipyrimidine photolyase-related protein  32.86 
 
 		 496 aa  251  2e-65  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.119687 
 
 
-
 
NC_008817  P9515_04871  hypothetical protein  31.05 
 
 		 496 aa  242  1e-62  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  1  n/a   
 
 
-
 
NC_008816  A9601_04781  hypothetical protein  29.16 
 
 		 496 aa  241  2.9999999999999997e-62  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.289419  n/a   
 
 
-
 
NC_007335  PMN2A_0726  hypothetical protein  30.29 
 
 		 496 aa  238  1e-61  Prochlorococcus marinus str. NATL2A  Bacteria  normal  1  n/a   
 
 
-
 
NC_009091  P9301_04471  hypothetical protein  29.16 
 
 		 496 aa  237  3e-61  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  0.77539  n/a   
 
 
-
 
NC_008819  NATL1_15641  hypothetical protein  29.27 
 
 		 496 aa  236  8e-61  Prochlorococcus marinus str. NATL1A  Bacteria  normal  1  normal  0.681049 
 
 
-
 
NC_007577  PMT9312_0423  hypothetical protein  29.16 
 
 		 496 aa  235  1.0000000000000001e-60  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  0.27403  n/a   
 
 
-
 
NC_008228  Patl_2797  deoxyribodipyrimidine photolyase-related protein  30.64 
 
 		 503 aa  235  2.0000000000000002e-60  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_007516  Syncc9605_1361  photolyase family protein  36.52 
 
 		 498 aa  224  2e-57  Synechococcus sp. CC9605  Bacteria  normal  0.174089  normal  0.307121 
 
 
-
 
NC_007513  Syncc9902_1117  photolyase family protein  35.04 
 
 		 505 aa  222  9.999999999999999e-57  Synechococcus sp. CC9902  Bacteria  normal  0.322412  n/a   
 
 
-
 
NC_008312  Tery_3925  deoxyribodipyrimidine photolyase-related protein  29.21 
 
 		 476 aa  222  9.999999999999999e-57  Trichodesmium erythraeum IMS101  Bacteria  normal  1  hitchhiker  0.0027073 
 
 
-
 
NC_011886  Achl_2542  deoxyribodipyrimidine photolyase-related protein  35.81 
 
 		 537 aa  214  2.9999999999999995e-54  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000228868 
 
 
-
 
NC_013521  Sked_26230  deoxyribodipyrimidine photolyase-related protein  34.92 
 
 		 532 aa  214  2.9999999999999995e-54  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.355559  normal  0.113738 
 
 
-
 
NC_010531  Pnec_1265  deoxyribodipyrimidine photolyase-like protein  49.5 
 
 		 186 aa  120  7.999999999999999e-26  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  1  normal  0.224709 
 
 
-
 
NC_004347  SO_4168  hypothetical protein  41.38 
 
 		 122 aa  47  0.0007  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
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