Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01727 |
Symbol | |
ID | 6306590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 3157768 |
End bp | 3159345 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642640344 |
Product | deoxyribodipyrimidine photolyase-related protein |
Protein accession | YP_001914201 |
Protein GI | 188577272 |
COG category | [R] General function prediction only |
COG ID | [COG3046] Uncharacterized protein related to deoxyribodipyrimidine photolyase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCATGATT CCAGCGCGCC CACAGCGCAG ACCACCCAGC AAAGGCCGGC CAATACGCTG CGTCTGATTC TGGGCGACCA GCTCAATCCA CAACACAGCT GGTTTGCGAC GCGCGATGCG GGCGTGGTCT ATGTGTTGAT GGAAGTGCGG CAGGAAACCG ACTACGTGCT GCATCACGCG CAGAAGGTCC TGGCGATCTT CGCGGCCATG CGTGCCTTCG CTGCAGGTTT GCGGCGGGAC GGGCATCGGG TGCGCTATGT GACGATCGAC AATGCCAGCA ACCGGCAGTC GATCCCGCAC AACCTCGAGG CGTTGATGGC GCATTACCGG GCCGACCGGT TGGACTACCA GGCCCCGGAC GAGTGGCGGC TGGACGAAGC GCTGCAGCAC TGGAGCGCGG CGCAGCCCTT TGCCACGCGC ATGGTCGACA GCGAACATTT TCTGACCGCG CGCAATGAAG TCGCCGCCTG TTTTCGCGCC GGCAGCCCGT GGCGCATGGA CGTGTTTTAT CGGCGCATGC GGCGCCAGCA TCGGATCCTG CTCGATGCCG CCGGCGAACC GGAAGGCGGG CGCTGGAACT TCGATCACGA CAATCGTGCG CCGTGGCCGG GCGACCCACC TGCGCCACGG GATTGGCGCG CAACGCACGA TCACAGCGCG CTGTGGCGCA CGATCGAAGC CGCCGGCGTG CGCAGTTTTG GCGCGCCGAA TGCGCAAGCT CTGCCATGGC CGGTCGATCG CGAGGAAGCC TTGCAGCATC TGGATGCATT CATCGCAGAC GCCTTGCCGG ATTTCGGCCG CTACGAAGAT GCGATGAGCA CGCGCAGCCC GCGCCTGTTT CATTCGCTGC TGTCGTTTGC GCTCAACGTC AAGATGCTGC ATCCGCGCGA AGTGATCGCG CGTGCCGAAG CGGCATGGCG GCAAGGGCAT GCGCCGTTGG CGGCGGTGGA AGGCTTCATC CGCCAGATTC TGGGGTGGCG CGAATACGTG CGCGGTGTGT ACTGGTCGCA GATGCCCGGC TACGCGGATT TGAATCACCT CGATCAGCAT GCACCGCTGC CGCACTGGTT CTGGGATGGG CAGATCGGCA TGCGCTGCCT GGCCGATGCG GTCGGTAATT CGCTGGCCAA CGCGCATGCG CATCACATCC AGCGGCTGAT GGTGATCGGC AATTTTGCGC TGCTGGCGGG GCTGGACCCG CAGGCGCTGC ATCGCTGGTA CTTGGGCGTG TACATCGACG CCTTCGAGTG GGTGGAGCTG CCCAATACGG TCGGCATGAG TCAGTTCGCC GATGGTGGCC TGCTGGGCAG CAAGCCGTAT ATCAGCGGCG CGGCCTATGT CGATCGCATG AGCGATTACT GCAGTGGCTG CCGGTACCAG CGCAAGCTGC GGGTCGGCGC GAACGCGTGC CCGTACAACG CGTTGTACTG GGATTTCCTG CAGCGCCAGC GTCCGCTGTT GGGCGCCAAC GAACGCCTGG CACTGCCGTA TCGCCAGCTC GATGGCATGG CCCCCGAGGT GTTGGCTGAG GTGCAGGCCC AGGCCGCGCA TTGGCGGTCC CATCTCGAGG CACTGTGA
|
Protein sequence | MHDSSAPTAQ TTQQRPANTL RLILGDQLNP QHSWFATRDA GVVYVLMEVR QETDYVLHHA QKVLAIFAAM RAFAAGLRRD GHRVRYVTID NASNRQSIPH NLEALMAHYR ADRLDYQAPD EWRLDEALQH WSAAQPFATR MVDSEHFLTA RNEVAACFRA GSPWRMDVFY RRMRRQHRIL LDAAGEPEGG RWNFDHDNRA PWPGDPPAPR DWRATHDHSA LWRTIEAAGV RSFGAPNAQA LPWPVDREEA LQHLDAFIAD ALPDFGRYED AMSTRSPRLF HSLLSFALNV KMLHPREVIA RAEAAWRQGH APLAAVEGFI RQILGWREYV RGVYWSQMPG YADLNHLDQH APLPHWFWDG QIGMRCLADA VGNSLANAHA HHIQRLMVIG NFALLAGLDP QALHRWYLGV YIDAFEWVEL PNTVGMSQFA DGGLLGSKPY ISGAAYVDRM SDYCSGCRYQ RKLRVGANAC PYNALYWDFL QRQRPLLGAN ERLALPYRQL DGMAPEVLAE VQAQAAHWRS HLEAL
|
| |