| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0896 |
|---|
| Symbol | |
|---|
| ID | 4027266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 1007984 |
|---|
| End bp | 1009558 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637966073 |
|---|
| Product | deoxyribodipyrimidine photolyase-related protein |
|---|
| Protein accession | YP_572952 |
|---|
| Protein GI | 92113024 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3046] Uncharacterized protein related to deoxyribodipyrimidine photolyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAGT CATTGCGACT GGTGCTCGGT GACCAGCTCA GCCTGACGCT GCCCACATTG
CAGGATGCGC CGCCAGGGGC GACGGTCGCT CTCTGCGAGG TCGATGAAGA AGGGCGCTAC
GTCCCCCATC ACCCGCAGAA GATCGCCATG ATGCTCGCCG CGATGCGGCA TTTCGCCGCC
GAGCTGCGTC AGCGGGGGTA TCGCGTGCAT TATTCGACCC TCGACGATCC CGACAACCGG
CACTCGCTGA TCGCAGAGGC GGAACGTCTG GCAAAACGGC AAGGCTGCGA CGAGATTCAC
GTGACCCGGC CAGGAGAGTG GCGTCTGCTG AAGGCCATGG AGGCGCGGCA GGCGCAGGAT
CGAACGCCAC GCTGGCGCAT CGTCGAAGAC ACCCGGTTCT TCTGCTCCCA CCGCGATTTC
GATGCCTGGA TGGAAGGCCG CAAACGGCCA CGCATGGAGG ACTTCTATCG CATGCTGCGT
CGACGCACCG GGCTGCTCAT GGACGGCAAC GCACCGGTCG GCGGGCAGTG GAATTTCGAC
CGCGACAATC GTGCCCCCAT CGATGACGCG CCATCCCCAC CCTCGCCGCC TCGCCATCGC
CAGGATGCCG TCACCCGGGA GGTGCTGGCA CTCGTCGAGA AACGCTTCGC CGATCACGTC
GGACGCCTGG AGGGCTTCAA CTGGCCCGTC ACCCGACGCC AGGCCCTTGC CGATCTGCGC
CACTTCGTCG CCCGGGCCTT GCCGGCGTTC GGCACCTACC AGGATGCCAT CAGCGATACG
GCGCCCTATC TCTTTCACTC CAGGCTCTCC GCTGCACTCA ATATCGGCCT GCTGTCCCCC
GGCGAGGTAT GCGAGGCGGC ACAGGACGCC TGGCAAGGTG GCGAGGCGCC ACTCAACGCC
GTGGAGGGCT TCATTCGCCA GATACTGGGG TGGCGGGAAT ACGTTCGCGG CATCTATTGG
CACCGTATGC CCGCCTACAA GCGCGAGAAC CAGCTCGGCG CCACCCGCGG GCTTCCCCGG
TGCTACTGGG ACGGCGATAC CGATCTGCGC TGCCTGCAGC GCGCCATCGA AATGACCCAC
GACAATGCCT ATGCGCATCA CATCCAGCGC CTGATGGTCA CGGGCAACTT CGCGCTGCTC
TGCGACGTTC GCCCTGCGGC CTTGTGCGAT TGGTACCTCG CGGTCTACGC CGACGCCTGC
GAATGGGTCG AGCTGCCCAA TACGCTGGGC ATGGTGCTGC ACGCCGACGG CGGCTACCTG
GGCTCCAAGC CCTATTGCGC CTCGGGCAAG TATATCGACC GCATGTCGGA TCACTGCGCC
CAATGTCGCT ATGACCCGCG CCAGAGCGTG GGCGAGAACG CCTGCCCCTT CAACGCCTTG
TACTGGCGCT TCCTGGAGCG TCATGCCGAC CAGCTCGCCG ACAATCCGCG CATGCGGGTC
ATATACGGCA CGCTCGACAA GATGTCGGCG CACAAGCGCC AGGCGTTACG CCAACAGGCG
GACACGTTTC TCGACTCGCT GACATGGACG CCACCTTACG GGCAAGGCCA GCATGCAAGC
GACTACGGCG AGTGA
|
|---|
| Protein sequence | MSKSLRLVLG DQLSLTLPTL QDAPPGATVA LCEVDEEGRY VPHHPQKIAM MLAAMRHFAA
ELRQRGYRVH YSTLDDPDNR HSLIAEAERL AKRQGCDEIH VTRPGEWRLL KAMEARQAQD
RTPRWRIVED TRFFCSHRDF DAWMEGRKRP RMEDFYRMLR RRTGLLMDGN APVGGQWNFD
RDNRAPIDDA PSPPSPPRHR QDAVTREVLA LVEKRFADHV GRLEGFNWPV TRRQALADLR
HFVARALPAF GTYQDAISDT APYLFHSRLS AALNIGLLSP GEVCEAAQDA WQGGEAPLNA
VEGFIRQILG WREYVRGIYW HRMPAYKREN QLGATRGLPR CYWDGDTDLR CLQRAIEMTH
DNAYAHHIQR LMVTGNFALL CDVRPAALCD WYLAVYADAC EWVELPNTLG MVLHADGGYL
GSKPYCASGK YIDRMSDHCA QCRYDPRQSV GENACPFNAL YWRFLERHAD QLADNPRMRV
IYGTLDKMSA HKRQALRQQA DTFLDSLTWT PPYGQGQHAS DYGE
|
|---|
| |