| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1000 |
|---|
| Symbol | |
|---|
| ID | 4285298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 1094529 |
|---|
| End bp | 1096064 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638140470 |
|---|
| Product | deoxyribodipyrimidine photolyase-related protein |
|---|
| Protein accession | YP_756231 |
|---|
| Protein GI | 114569551 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3046] Uncharacterized protein related to deoxyribodipyrimidine photolyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.760695 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGAAT GTGTGATGAC CGACCTGGTA TTGGTGCTGG GCGACCAGCT GAGCCCCGAC
CTCGCGAGCC TGCGCCAGAC CGCGCCGGGC GAGGCCGATA TCCTGATGGT CGAGGCGATC
AGCGAAACAG GCTATGTCTG GCATCACCGC AAGAAGATCG CCCTGGTCCT CTCCGCCATG
CGCCATTTCG CGGCCGAACT GGAAGCGACG GGACGGCGGG TGGTCTATCA CCGGCTCGAC
CAGGCCAGGC CCTGCACCAG TTTCACCGAC GCGGTCGAGC GGGCGCTGGC GGAGGGGGCG
TACAAGCGCA TCATCCTGAC CGAATCGGGC GAATGGCGGC TGCGCAAGGA GTTCGAGGGC
TGGCGGGACC GTTTCGATGT GCCTGTCGTG ATCGTTGAGG ACGACCGCTT CATCTGCAGC
CATGACCGCT TCCACCGCTG GGCCGAGGGG CGCAAGCAAT TGCGGATGGA GTATTTCTAC
CGCGAGATGC GCCGCGAGAC CGACCTGCTC ATGGACGGCG ACAAGCCGGC CGGCGGGCGC
TGGAATTATG ACGCCGACAA CCGCAAGCCA GCCGATGCCG ACTTGTTCAT GCCGCGCCCG
CACGCCGTCG AGCCGGACGC GGTGACACAG TCGGTGATCG CCCTTGTAGC ATCACGCTTT
CCTGACGGGT TCGGCGATAT CGAGCCGTTT CGCTTCGCCG TGACGCGGGT CGGGGCCGAG
GCGGCGCTGG ATCATTTCAT CGACACCGCC CTCGCCGATT TCGGCCACTA TCAGGACGCC
ATGCTGGCCG GCGAAGCCTT CCTCTATCAC TCGCTGCTGT CGGCCTACAT CAATATCGGC
CTGCTCGACC CGCTTGCCGT CTGTCATCGT GTCGAAGCGG CGTGGCGCGC CGGCAGGGCG
CCGCTGAACG CGGCCGAAGG CTTCATCCGC CAGATCATCG GCTGGCGCGA ATATGTGCGC
GGCATCTATT GGCGCGAAGG ACCGGACTAT GTCCGCCGCA ACGCCCTGAA GGCGACACGC
CCCCTGCCCG AATTCTACTG GACCGGCGAG ACCGACATGG CCTGCCTCGC CGCCACGATC
GACCAGACCC GGCGCGAGGC TTATGCCCAC CATATCCAGC GCCTGATGGT GACCGGCACC
TTTGCCATGA TCGCCGGGAT TGATCCGCAC GCCGTGCACG AATGGTATCT CGCCGTCTAT
ATCGATGCGT TTGAATGGGT CGAGGCGCCC AATGTGATCG GCATGTCGCA ATTCGCCGAT
GGCGGCTTGC TGGCCTCCAA GCCCTACGCC GCCAGCGGCG CCTATATCGA CCGCATGTCG
GACTACTGTT CCGGCTGTCG TTTCAATGTG AAGGACAAGA CCGGGCCAGA CAGCTGCCCG
TTCAATTCAC TCTATTGGGA CTTCCTCGAC CGCAATGCCG ATACCTTGCG CGGCAATCCG
CGGCTCGGAC CGGTCTATCG CAACTGGGAC CGGATGAGCG ACGACAAACG CCAGGCCTAT
CGCGACCGGG CCCGCGACGT GCTCGACACA CTCTAG
|
|---|
| Protein sequence | MKECVMTDLV LVLGDQLSPD LASLRQTAPG EADILMVEAI SETGYVWHHR KKIALVLSAM
RHFAAELEAT GRRVVYHRLD QARPCTSFTD AVERALAEGA YKRIILTESG EWRLRKEFEG
WRDRFDVPVV IVEDDRFICS HDRFHRWAEG RKQLRMEYFY REMRRETDLL MDGDKPAGGR
WNYDADNRKP ADADLFMPRP HAVEPDAVTQ SVIALVASRF PDGFGDIEPF RFAVTRVGAE
AALDHFIDTA LADFGHYQDA MLAGEAFLYH SLLSAYINIG LLDPLAVCHR VEAAWRAGRA
PLNAAEGFIR QIIGWREYVR GIYWREGPDY VRRNALKATR PLPEFYWTGE TDMACLAATI
DQTRREAYAH HIQRLMVTGT FAMIAGIDPH AVHEWYLAVY IDAFEWVEAP NVIGMSQFAD
GGLLASKPYA ASGAYIDRMS DYCSGCRFNV KDKTGPDSCP FNSLYWDFLD RNADTLRGNP
RLGPVYRNWD RMSDDKRQAY RDRARDVLDT L
|
|---|
| |