Gene Caul_2919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2919 
Symbol 
ID5900374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3164981 
End bp3166417 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content70% 
IMG OID641563416 
Productdeoxyribodipyrimidine photo-lyase 
Protein accessionYP_001684544 
Protein GI167646881 
COG category[L] Replication, recombination and repair 
COG ID[COG0415] Deoxyribodipyrimidine photolyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.219923 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCG AACGAGACGG CCCCATCATC GTCTGGCTGC GCAACGACCT GCGCCTGGCC 
GACAATCCCG CGCTGATCGC CGCCGCCGCG ACCGGGCGGC CGGTGATCCC GCTCTACATC
CTGGATGAGA CGCCCGGTGT GCGGCCGATG GGCGACGCGT CGCTGTGGTG GCTCGACAAG
TCGCTGGCCG CCCTCGACGC GGCGCTGCGG GCGACCGGCT CGCGGCTGAT CCTACGGCGC
GGGCCGGCTC GGGCGGTGCT GGAGGAGGTC GTCGCCGACG CCGAGGCGGC GGCCGTGGTC
TGGAACCGGC TCTATGACGC CGCATCGATC GAGCGCGACA GCGCCCTCAA GGCCTGGCTG
AAGGACGAGG GCGTCGCCTG CGAAAGCTTC AACGCCGGGC TGCTGAACGA GCCCTGGACG
GTAAAGAATG GTTCAGGCCA GCCCTACAAG GTCTTCACCC CCTACTGGCG GGCGGCTCGC
GACCAGCTTC ATGACGTTCA TGTCGAGCCC GCGCCCAAGA CCCTGGCCGC GCCGGCGCAC
TGGCCCCACG GCGACGCGCT GGAGGACTGG ACCCTGCACC CCGCCCTGCT CGACTGGTCC
ACGGGTTTCG ACCTATGGAC GCCCGGCGAG GCGGGCGCGC TGGCGCGGCT GGACGACTTC
CTGTCCGGAC CCGTCCAGGA CTACGGGCAC AAGCGCGACT TCCCCGGCGT CGAAGCCACC
TCCCGCCTGT CGCCGCACCT GCACTTTGGC GAGATCGGCC CGCGCCAGGT CTGGGCCGCG
GCCCGCCATG CCGCCGAGGC CGGGGACGCG CCCGCCGGCC AGGTGGAGAA GTTCCTGTCC
GAGATCGGCT GGCGCGAATT CAACCATTCG ATCCTGTTCC ATAACCCGGA CCTCCCCCAC
ACCAGCTTCC GTCCGGAGTT CGACGGTTTT CCCTGGGTGA AGAACCCCGC CGCCTTCGAG
GCCTGGAGCC GGGGCCAGAC CGGCTATCCG ATCGTCGACG CCGGGATGCG CGAGCTGTGG
GCCACCGGCT TCATGCACAA TCGCGTGCGG ATGATCGTCG CCTCGTTCCT GGTCAAGCAC
CTGCTGATCG ACTGGCGCGA GGGCGAGGCC TGGTTCTGGG ACACGCTGGT CGACGCCGAC
CTGGCCAGCA ATGTCGGCAA CTGGCAGTGG GTGGCCGGCG GCGGGGCCGA CGCCGCGCCC
TATTTCCGGA TCTTCAACCC GATCGCCCAG GGCCAGAAGT TCGACCCCGC CGGCGCCTAT
GTCCGCCGCT GGGTTCCAGA ACTGGCCAAG CTGCCCGACG CGCTGATCCA CGAGCCTTGG
AAAGCTTCAC CTGATCCAGG CGCCGCCGCC GCGCGTATCT ATCCTGAACC GATCGTGGGG
CACCCGGCGG CGCGCGAACG CGCGTTGGAG GCCTATCGCG GTCTCAAGGG AGGCTAG
 
Protein sequence
MRIERDGPII VWLRNDLRLA DNPALIAAAA TGRPVIPLYI LDETPGVRPM GDASLWWLDK 
SLAALDAALR ATGSRLILRR GPARAVLEEV VADAEAAAVV WNRLYDAASI ERDSALKAWL
KDEGVACESF NAGLLNEPWT VKNGSGQPYK VFTPYWRAAR DQLHDVHVEP APKTLAAPAH
WPHGDALEDW TLHPALLDWS TGFDLWTPGE AGALARLDDF LSGPVQDYGH KRDFPGVEAT
SRLSPHLHFG EIGPRQVWAA ARHAAEAGDA PAGQVEKFLS EIGWREFNHS ILFHNPDLPH
TSFRPEFDGF PWVKNPAAFE AWSRGQTGYP IVDAGMRELW ATGFMHNRVR MIVASFLVKH
LLIDWREGEA WFWDTLVDAD LASNVGNWQW VAGGGADAAP YFRIFNPIAQ GQKFDPAGAY
VRRWVPELAK LPDALIHEPW KASPDPGAAA ARIYPEPIVG HPAARERALE AYRGLKGG