More than 300 homologs were found in PanDaTox collection
for query gene Sros_4987 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013595  Sros_4987  binding-protein-dependent transport systems inner membrane component  100 
 
 
292 aa  578  1e-164  Streptosporangium roseum DSM 43021  Bacteria  normal  0.753078  normal 
 
 
-
 
NC_013131  Caci_7905  binding-protein-dependent transport systems inner membrane component  57.84 
 
 
336 aa  337  9.999999999999999e-92  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  51.2 
 
 
315 aa  319  3.9999999999999996e-86  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4689  binding-protein-dependent transport systems inner membrane component  55.9 
 
 
298 aa  298  1e-79  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.664924 
 
 
-
 
NC_003909  BCE_1900  sugar ABC transporter, permease protein, putative  51.74 
 
 
314 aa  296  4e-79  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  51.74 
 
 
314 aa  296  4e-79  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1656  binding-protein-dependent transport systems inner membrane component  51.03 
 
 
318 aa  292  4e-78  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.152531  normal  0.26367 
 
 
-
 
NC_013172  Bfae_06280  permease component of ABC-type sugar transporter  46.37 
 
 
303 aa  270  2.9999999999999997e-71  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_05100  permease component of ABC-type sugar transporter  46.59 
 
 
316 aa  257  2e-67  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2572  binding-protein-dependent transport systems inner membrane component  42.46 
 
 
312 aa  223  2e-57  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  41.75 
 
 
313 aa  221  1.9999999999999999e-56  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  44.17 
 
 
307 aa  217  2e-55  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  44.17 
 
 
307 aa  217  2e-55  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  42.51 
 
 
305 aa  209  6e-53  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_009664  Krad_2165  sugar ABC transporter  53.89 
 
 
216 aa  197  2.0000000000000003e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  36.97 
 
 
296 aa  196  3e-49  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  40.14 
 
 
294 aa  195  6e-49  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  39.18 
 
 
310 aa  195  7e-49  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  38.98 
 
 
314 aa  194  1e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_004311  BRA1182  sugar ABC transporter, permease protein, putative  38.91 
 
 
319 aa  192  4e-48  Brucella suis 1330  Bacteria  normal  0.547049  n/a   
 
 
-
 
NC_009486  Tpet_0321  binding-protein-dependent transport systems inner membrane component  42.86 
 
 
420 aa  192  4e-48  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A1085  putative sugar ABC transporter, permease protein  38.91 
 
 
319 aa  192  5e-48  Brucella ovis ATCC 25840  Bacteria  normal  0.589946  n/a   
 
 
-
 
NC_010483  TRQ2_0339  binding-protein-dependent transport systems inner membrane component  42.86 
 
 
420 aa  192  5e-48  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  38.52 
 
 
318 aa  191  9e-48  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  42.66 
 
 
316 aa  191  1e-47  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_1616  binding-protein-dependent transport systems inner membrane component  43.64 
 
 
429 aa  188  8e-47  Thermosipho melanesiensis BI429  Bacteria  normal  0.225919  n/a   
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  38.81 
 
 
321 aa  188  1e-46  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  37.93 
 
 
306 aa  186  3e-46  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  37.16 
 
 
299 aa  186  5e-46  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  39.44 
 
 
294 aa  185  9e-46  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  37.46 
 
 
308 aa  184  1.0000000000000001e-45  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  41.34 
 
 
316 aa  184  2.0000000000000003e-45  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  35.19 
 
 
300 aa  182  4.0000000000000006e-45  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  38.91 
 
 
311 aa  182  6e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  37.63 
 
 
299 aa  182  8.000000000000001e-45  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  38.91 
 
 
321 aa  180  2e-44  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  39.38 
 
 
309 aa  180  2e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_013530  Xcel_2535  binding-protein-dependent transport systems inner membrane component  38.81 
 
 
314 aa  180  2e-44  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  34.25 
 
 
295 aa  180  2e-44  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_012669  Bcav_2875  binding-protein-dependent transport systems inner membrane component  39.5 
 
 
318 aa  180  2.9999999999999997e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal  0.0272583 
 
 
-
 
NC_011886  Achl_0498  binding-protein-dependent transport systems inner membrane component  37.54 
 
 
317 aa  180  2.9999999999999997e-44  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000449996 
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  37.8 
 
 
313 aa  178  9e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4319  binding-protein-dependent transport systems inner membrane component  37.28 
 
 
312 aa  178  1e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.778687  hitchhiker  0.00185272 
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  38.26 
 
 
292 aa  178  1e-43  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  37.05 
 
 
300 aa  178  1e-43  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  43.43 
 
 
287 aa  177  3e-43  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2682  binding-protein-dependent transport systems inner membrane component  39.93 
 
 
293 aa  176  3e-43  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.990678  normal 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  38.93 
 
 
306 aa  176  4e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_009718  Fnod_0395  binding-protein-dependent transport systems inner membrane component  40.55 
 
 
436 aa  176  4e-43  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0125  binding-protein-dependent transport systems inner membrane component  39.12 
 
 
302 aa  175  7e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009636  Smed_3328  binding-protein-dependent transport systems inner membrane component  37.15 
 
 
318 aa  175  7e-43  Sinorhizobium medicae WSM419  Bacteria  normal  0.670475  normal  0.953703 
 
 
-
 
NC_011988  Avi_5581  ABC transporter membrane spanning protein (galacturonic acid)  38.62 
 
 
314 aa  175  9e-43  Agrobacterium vitis S4  Bacteria  normal  0.512211  n/a   
 
 
-
 
NC_013595  Sros_3537  ABC transporter membrane spanning protein (galacturonic acid)  39.04 
 
 
322 aa  175  9e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601194  normal 
 
 
-
 
NC_013595  Sros_7694  ABC transporter membrane spanning protein (sugar)  41.78 
 
 
312 aa  174  9.999999999999999e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.753078  normal  0.6921 
 
 
-
 
NC_007778  RPB_0176  binding-protein dependent transport system inner membrane protein  41.46 
 
 
314 aa  174  9.999999999999999e-43  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_1377  binding-protein-dependent transport systems inner membrane component  43.22 
 
 
453 aa  174  9.999999999999999e-43  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  37.88 
 
 
317 aa  175  9.999999999999999e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_4345  binding-protein-dependent transport systems inner membrane component  36.61 
 
 
319 aa  174  9.999999999999999e-43  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.0000915897 
 
 
-
 
NC_011886  Achl_2661  binding-protein-dependent transport systems inner membrane component  38.87 
 
 
320 aa  174  1.9999999999999998e-42  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_007958  RPD_3149  binding-protein-dependent transport systems inner membrane component  39.08 
 
 
315 aa  173  2.9999999999999996e-42  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0566553  normal  0.330059 
 
 
-
 
NC_013131  Caci_4985  binding-protein-dependent transport systems inner membrane component  39.3 
 
 
313 aa  173  2.9999999999999996e-42  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00226923  hitchhiker  0.00373728 
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  38.13 
 
 
307 aa  173  2.9999999999999996e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_011886  Achl_3130  binding-protein-dependent transport systems inner membrane component  36.3 
 
 
314 aa  173  2.9999999999999996e-42  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.00699527 
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  34.84 
 
 
309 aa  173  2.9999999999999996e-42  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  37.45 
 
 
291 aa  172  3.9999999999999995e-42  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_013530  Xcel_2648  binding-protein-dependent transport systems inner membrane component  38.64 
 
 
315 aa  172  3.9999999999999995e-42  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.604604  n/a   
 
 
-
 
NC_011369  Rleg2_4016  binding-protein-dependent transport systems inner membrane component  35.93 
 
 
319 aa  172  3.9999999999999995e-42  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  36.64 
 
 
321 aa  172  5.999999999999999e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_4049  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
292 aa  172  6.999999999999999e-42  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0559  binding-protein-dependent transport systems inner membrane component  37.54 
 
 
305 aa  172  7.999999999999999e-42  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3328  binding-protein-dependent transport systems inner membrane component  35.96 
 
 
314 aa  172  7.999999999999999e-42  Arthrobacter sp. FB24  Bacteria  normal  0.0166533  n/a   
 
 
-
 
NC_012669  Bcav_1533  binding-protein-dependent transport systems inner membrane component  38.33 
 
 
318 aa  171  1e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.384041  normal  0.0165665 
 
 
-
 
NC_011004  Rpal_0131  binding-protein-dependent transport systems inner membrane component  40.35 
 
 
319 aa  171  1e-41  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.128042  n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
309 aa  170  2e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_28370  carbohydrate ABC transporter membrane protein  37.5 
 
 
287 aa  170  2e-41  Brachybacterium faecium DSM 4810  Bacteria  normal  0.096742  n/a   
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
305 aa  170  3e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_012850  Rleg_3429  binding-protein-dependent transport systems inner membrane component  35.76 
 
 
307 aa  169  4e-41  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1516  binding-protein-dependent transport systems inner membrane component  38.52 
 
 
315 aa  169  4e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0640497  normal 
 
 
-
 
NC_009636  Smed_2314  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
310 aa  169  4e-41  Sinorhizobium medicae WSM419  Bacteria  normal  0.498676  normal  0.350334 
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  37.14 
 
 
283 aa  169  4e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1704  putative transport system permease ABC transporter protein  37.19 
 
 
324 aa  169  5e-41  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2375  binding-protein-dependent transport systems inner membrane component  36.03 
 
 
298 aa  169  5e-41  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_0856  binding-protein-dependent transport systems inner membrane component  37.89 
 
 
293 aa  169  5e-41  Polaromonas sp. JS666  Bacteria  normal  normal  0.565462 
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  38.62 
 
 
317 aa  169  7e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  35.4 
 
 
306 aa  169  7e-41  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_010682  Rpic_1093  binding-protein-dependent transport systems inner membrane component  36.49 
 
 
293 aa  168  1e-40  Ralstonia pickettii 12J  Bacteria  normal  0.0106698  normal 
 
 
-
 
NC_012856  Rpic12D_1186  binding-protein-dependent transport systems inner membrane component  36.49 
 
 
293 aa  167  1e-40  Ralstonia pickettii 12D  Bacteria  normal  0.0963268  normal 
 
 
-
 
NC_013521  Sked_07100  carbohydrate ABC transporter membrane protein  36.96 
 
 
318 aa  168  1e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.790586  normal 
 
 
-
 
NC_013521  Sked_03080  permease component of ABC-type sugar transporter  38.97 
 
 
322 aa  167  2e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal 
 
 
-
 
NC_013172  Bfae_29410  carbohydrate ABC transporter membrane protein  38.83 
 
 
322 aa  167  2e-40  Brachybacterium faecium DSM 4810  Bacteria  normal  0.899558  n/a   
 
 
-
 
NC_013521  Sked_11610  permease component of ABC-type sugar transporter  36.73 
 
 
311 aa  166  2.9999999999999998e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.117578  normal  0.102082 
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  38.03 
 
 
317 aa  166  2.9999999999999998e-40  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_010184  BcerKBAB4_0481  binding-protein-dependent transport systems inner membrane component  33.44 
 
 
310 aa  166  4e-40  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00881  ABC transporter sugar permease  39.25 
 
 
294 aa  166  4e-40  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0244413  n/a   
 
 
-
 
NC_011725  BCB4264_A0604  putative glycerol-3-phosphate ABC transporter, permease protein  33.44 
 
 
310 aa  166  4e-40  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2459  binding-protein-dependent transport systems inner membrane component  36.52 
 
 
331 aa  166  5e-40  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.216304  n/a   
 
 
-
 
NC_008752  Aave_3651  binding-protein-dependent transport systems inner membrane component  38.95 
 
 
301 aa  166  5e-40  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0332234  normal 
 
 
-
 
NC_012669  Bcav_3898  binding-protein-dependent transport systems inner membrane component  36.68 
 
 
324 aa  166  5e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  34.69 
 
 
305 aa  166  5e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4735  putative glycerol-3-phosphate ABC transporter, permease protein  33.44 
 
 
310 aa  165  5.9999999999999996e-40  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
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