More than 300 homologs were found in PanDaTox collection
for query gene Sdel_1923 on replicon NC_013512
Organism: Sulfurospirillum deleyianum DSM 6946



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013512  Sdel_1923  carbamoyl-phosphate synthase, small subunit  100 
 
 
376 aa  782    Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0080  carbamoyl phosphate synthase small subunit  65.86 
 
 
381 aa  516  1.0000000000000001e-145  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.0555876  n/a   
 
 
-
 
NC_009714  CHAB381_1365  carbamoyl phosphate synthase small subunit  62.94 
 
 
370 aa  500  1e-140  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_012039  Cla_0372  carbamoyl phosphate synthase small subunit  61.62 
 
 
372 aa  484  1e-136  Campylobacter lari RM2100  Bacteria  normal  0.710371  n/a   
 
 
-
 
NC_009715  CCV52592_0898  carbamoyl phosphate synthase small subunit  60.38 
 
 
372 aa  486  1e-136  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_0374  carbamoyl phosphate synthase small subunit  60.76 
 
 
372 aa  484  1e-136  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.259236  n/a   
 
 
-
 
NC_003912  CJE1667  carbamoyl phosphate synthase small subunit  60.81 
 
 
372 aa  480  1e-134  Campylobacter jejuni RM1221  Bacteria  normal  0.764273  n/a   
 
 
-
 
NC_009707  JJD26997_1842  carbamoyl phosphate synthase small subunit  60.54 
 
 
372 aa  478  1e-134  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_1486  carbamoyl phosphate synthase small subunit  60.81 
 
 
372 aa  480  1e-134  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1361  carbamoyl phosphate synthase small subunit  46.34 
 
 
376 aa  323  3e-87  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A0074  carbamoyl phosphate synthase small subunit  44.39 
 
 
382 aa  322  7e-87  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B0073  carbamoyl phosphate synthase small subunit  43.85 
 
 
382 aa  319  6e-86  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A0070  carbamoyl phosphate synthase small subunit  43.85 
 
 
382 aa  318  7e-86  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A0072  carbamoyl phosphate synthase small subunit  43.85 
 
 
382 aa  318  7.999999999999999e-86  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.399436  normal  0.955538 
 
 
-
 
NC_010468  EcolC_3623  carbamoyl phosphate synthase small subunit  43.32 
 
 
382 aa  317  2e-85  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.314254 
 
 
-
 
NC_011083  SeHA_C0070  carbamoyl phosphate synthase small subunit  43.47 
 
 
391 aa  317  2e-85  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_00036  carbamoyl-phosphate synthase small subunit  43.32 
 
 
382 aa  316  5e-85  Escherichia coli BL21(DE3)  Bacteria  normal  0.53844  n/a   
 
 
-
 
CP001637  EcDH1_3567  carbamoyl-phosphate synthase, small subunit  43.32 
 
 
382 aa  316  5e-85  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_0035  carbamoyl phosphate synthase small subunit  43.32 
 
 
382 aa  316  5e-85  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_00035  hypothetical protein  43.32 
 
 
382 aa  316  5e-85  Escherichia coli BL21  Bacteria  normal  0.457385  n/a   
 
 
-
 
NC_010658  SbBS512_E0036  carbamoyl phosphate synthase small subunit  43.32 
 
 
382 aa  316  5e-85  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0033  carbamoyl phosphate synthase small subunit  43.32 
 
 
382 aa  316  5e-85  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A0035  carbamoyl phosphate synthase small subunit  43.32 
 
 
382 aa  316  5e-85  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0592  carbamoyl-phosphate synthase, small subunit  43.32 
 
 
382 aa  315  7e-85  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_0032  carbamoyl phosphate synthase small subunit  42.93 
 
 
391 aa  315  9.999999999999999e-85  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  45.68 
 
 
376 aa  313  1.9999999999999998e-84  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_009708  YpsIP31758_3454  carbamoyl phosphate synthase small subunit  43.32 
 
 
391 aa  313  3.9999999999999997e-84  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3019  carbamoyl-phosphate synthase small subunit  42.93 
 
 
377 aa  312  4.999999999999999e-84  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A0784  carbamoyl phosphate synthase small subunit  43.05 
 
 
391 aa  311  1e-83  Yersinia pestis Angola  Bacteria  normal  0.594963  normal  0.491126 
 
 
-
 
NC_009511  Swit_0435  carbamoyl phosphate synthase small subunit  42.93 
 
 
392 aa  311  1e-83  Sphingomonas wittichii RW1  Bacteria  normal  0.29183  normal 
 
 
-
 
NC_002939  GSU1273  carbamoyl phosphate synthase small subunit  45.08 
 
 
374 aa  310  4e-83  Geobacter sulfurreducens PCA  Bacteria  normal  0.0567002  n/a   
 
 
-
 
NC_010465  YPK_3583  carbamoyl phosphate synthase small subunit  42.78 
 
 
391 aa  309  5e-83  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_0591  carbamoyl phosphate synthase small subunit  42.93 
 
 
382 aa  309  5e-83  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_0896  carbamoyl-phosphate synthase, small subunit  43.32 
 
 
378 aa  309  5.9999999999999995e-83  Psychromonas ingrahamii 37  Bacteria  normal  0.348294  normal  0.560722 
 
 
-
 
NC_009832  Spro_0713  carbamoyl phosphate synthase small subunit  42.78 
 
 
382 aa  308  8e-83  Serratia proteamaculans 568  Bacteria  normal  normal  0.123455 
 
 
-
 
NC_007517  Gmet_1771  carbamoyl phosphate synthase small subunit  45.5 
 
 
374 aa  308  1.0000000000000001e-82  Geobacter metallireducens GS-15  Bacteria  normal  0.0224697  normal  0.089739 
 
 
-
 
NC_012917  PC1_3648  carbamoyl phosphate synthase small subunit  42.67 
 
 
382 aa  307  2.0000000000000002e-82  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.48497  n/a   
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  43.92 
 
 
366 aa  306  3e-82  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_0554  carbamoyl-phosphate synthase, small subunit  42.25 
 
 
381 aa  306  4.0000000000000004e-82  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2310  carbamoyl phosphate synthase small subunit  44.05 
 
 
374 aa  305  6e-82  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  44.53 
 
 
367 aa  305  9.000000000000001e-82  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1540  carbamoyl-phosphate synthase, small subunit  44.12 
 
 
356 aa  305  9.000000000000001e-82  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3646  carbamoyl phosphate synthase small subunit  43.73 
 
 
375 aa  305  1.0000000000000001e-81  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3841  carbamoyl phosphate synthase small subunit  42.4 
 
 
382 aa  305  1.0000000000000001e-81  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1898  carbamoyl phosphate synthase small subunit  43.78 
 
 
374 aa  303  3.0000000000000004e-81  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  42.22 
 
 
380 aa  303  4.0000000000000003e-81  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  42.22 
 
 
380 aa  303  4.0000000000000003e-81  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009379  Pnuc_1019  carbamoyl-phosphate synthase, small subunit  42.71 
 
 
397 aa  302  5.000000000000001e-81  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  43.09 
 
 
372 aa  302  6.000000000000001e-81  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.352304 
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  42.59 
 
 
389 aa  302  7.000000000000001e-81  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_007298  Daro_0938  carbamoyl-phosphate synthase small subunit  41.49 
 
 
385 aa  301  9e-81  Dechloromonas aromatica RCB  Bacteria  normal  0.742428  normal 
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  42.55 
 
 
391 aa  301  1e-80  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_003910  CPS_3459  carbamoyl phosphate synthase small subunit  42.97 
 
 
383 aa  300  2e-80  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3578  carbamoyl phosphate synthase small subunit  41.82 
 
 
381 aa  301  2e-80  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0674639  normal  0.11278 
 
 
-
 
NC_009483  Gura_1858  carbamoyl phosphate synthase small subunit  43.24 
 
 
373 aa  301  2e-80  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_2113  carbamoyl phosphate synthase small subunit  43.12 
 
 
371 aa  299  5e-80  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.000000000982338  normal  0.988223 
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  43.94 
 
 
373 aa  299  5e-80  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2527  carbamoyl phosphate synthase small subunit  45.63 
 
 
373 aa  299  5e-80  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2504  carbamoyl phosphate synthase small subunit  41.02 
 
 
381 aa  299  5e-80  Shewanella amazonensis SB2B  Bacteria  normal  0.323519  normal 
 
 
-
 
NC_010814  Glov_2083  carbamoyl phosphate synthase small subunit  44.05 
 
 
373 aa  298  8e-80  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  43.94 
 
 
373 aa  298  8e-80  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_009901  Spea_3075  carbamoyl phosphate synthase small subunit  41.55 
 
 
381 aa  297  2e-79  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0335125  n/a   
 
 
-
 
NC_009783  VIBHAR_00912  carbamoyl phosphate synthase small subunit  41.38 
 
 
416 aa  297  2e-79  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_3404  carbamoyl phosphate synthase small subunit  41.07 
 
 
385 aa  297  2e-79  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000786314 
 
 
-
 
NC_008751  Dvul_0268  carbamoyl phosphate synthase small subunit  42.09 
 
 
375 aa  297  2e-79  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.583908 
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  43.32 
 
 
367 aa  296  3e-79  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  43.67 
 
 
373 aa  296  4e-79  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_009438  Sputcn32_2940  carbamoyl phosphate synthase small subunit  40.8 
 
 
386 aa  296  4e-79  Shewanella putrefaciens CN-32  Bacteria  normal  0.185194  n/a   
 
 
-
 
NC_011663  Sbal223_1051  carbamoyl phosphate synthase small subunit  41.07 
 
 
387 aa  296  4e-79  Shewanella baltica OS223  Bacteria  normal  0.098868  hitchhiker  0.0000017806 
 
 
-
 
NC_002977  MCA1853  carbamoyl phosphate synthase small subunit  41.55 
 
 
378 aa  296  5e-79  Methylococcus capsulatus str. Bath  Bacteria  normal  0.0936768  n/a   
 
 
-
 
NC_009997  Sbal195_3526  carbamoyl phosphate synthase small subunit  41.07 
 
 
386 aa  296  5e-79  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_2839  carbamoyl phosphate synthase small subunit  40.75 
 
 
390 aa  295  6e-79  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00340084  normal  0.0286195 
 
 
-
 
NC_007520  Tcr_0878  carbamoyl-phosphate synthase, small subunit  42.09 
 
 
378 aa  295  7e-79  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1968  carbamoyl phosphate synthase small subunit  41.44 
 
 
379 aa  295  9e-79  Vibrio cholerae O395  Bacteria  normal  0.837999  n/a   
 
 
-
 
NC_008816  A9601_09091  carbamoyl phosphate synthase small subunit  42.89 
 
 
379 aa  295  1e-78  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.347132  n/a   
 
 
-
 
NC_011666  Msil_1622  carbamoyl-phosphate synthase, small subunit  42.56 
 
 
398 aa  294  1e-78  Methylocella silvestris BL2  Bacteria  n/a    decreased coverage  0.0014107 
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  43.34 
 
 
369 aa  294  1e-78  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_011312  VSAL_I0585  carbamoyl phosphate synthase small subunit  41.16 
 
 
384 aa  295  1e-78  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0152244  n/a   
 
 
-
 
NC_011899  Hore_02880  carbamoyl-phosphate synthase, small subunit  42.01 
 
 
364 aa  294  1e-78  Halothermothrix orenii H 168  Bacteria  normal  0.422195  n/a   
 
 
-
 
NC_013456  VEA_004479  carbamoyl-phosphate synthase small chain  41.6 
 
 
379 aa  295  1e-78  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  43.32 
 
 
380 aa  294  1e-78  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_0975  carbamoyl phosphate synthase small subunit  40.74 
 
 
381 aa  295  1e-78  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.00141878  n/a   
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  42.78 
 
 
391 aa  295  1e-78  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_004347  SO_1141  carbamoyl phosphate synthase small subunit  40.53 
 
 
386 aa  293  2e-78  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011138  MADE_02244  carbamoyl-phosphate synthase small subunit  41.85 
 
 
440 aa  293  2e-78  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0231375  n/a   
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  41.64 
 
 
388 aa  294  2e-78  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_009665  Shew185_3401  carbamoyl phosphate synthase small subunit  40.8 
 
 
391 aa  294  2e-78  Shewanella baltica OS185  Bacteria  hitchhiker  0.00720177  n/a   
 
 
-
 
NC_011365  Gdia_3032  carbamoyl phosphate synthase small subunit  41.98 
 
 
467 aa  293  2e-78  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.11486  normal  0.0418192 
 
 
-
 
NC_007963  Csal_3086  carbamoyl-phosphate synthase small subunit  39.26 
 
 
381 aa  294  2e-78  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.0580438  n/a   
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  43.4 
 
 
373 aa  294  2e-78  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  42.59 
 
 
369 aa  294  2e-78  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  40.96 
 
 
385 aa  293  3e-78  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_007984  BCI_0559  carbamoyl-phosphate synthase, small subunit  39.95 
 
 
381 aa  293  3e-78  Baumannia cicadellinicola str. Hc (Homalodisca coagulata)  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3305  carbamoyl phosphate synthase small subunit  40.8 
 
 
386 aa  293  3e-78  Shewanella baltica OS155  Bacteria  normal  0.314757  n/a   
 
 
-
 
NC_011901  Tgr7_0975  carbamoyl-phosphate synthase, small subunit  40.11 
 
 
379 aa  293  4e-78  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2370  carbamoyl phosphate synthase small subunit  42.59 
 
 
376 aa  293  4e-78  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.82733 
 
 
-
 
NC_010511  M446_3210  carbamoyl-phosphate synthase, small subunit  42.25 
 
 
405 aa  293  5e-78  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.295908 
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  40 
 
 
384 aa  292  6e-78  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_008228  Patl_2215  carbamoyl-phosphate synthase, small subunit  41.01 
 
 
381 aa  292  7e-78  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000311671  n/a   
 
 
-
 
NC_007406  Nwi_2446  carbamoyl phosphate synthase small subunit  42.34 
 
 
396 aa  292  8e-78  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.505949  normal  0.289169 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>