89 homologs were found in PanDaTox collection
for query gene SO_4169 on replicon NC_004347
Organism: Shewanella oneidensis MR-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008322  Shewmr7_0429  deoxyribodipyrimidine photolyase-related protein  94.74 
 
 		 525 aa  1033    Shewanella sp. MR-7  Bacteria  normal  0.50429  normal  1 
 
 
-
 
NC_009438  Sputcn32_0524  deoxyribodipyrimidine photolyase-related protein  88.29 
 
 		 521 aa  984    Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009456  VC0395_0425  hypothetical protein  63.81 
 
 		 516 aa  677    Vibrio cholerae O395  Bacteria  hitchhiker  0.0000280647  n/a   
 
 
-
 
NC_009052  Sbal_3872  deoxyribodipyrimidine photolyase-related protein  77.5 
 
 		 521 aa  837    Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_0335  deoxyribodipyrimidine photolyase-related protein  59.92 
 
 		 522 aa  653    Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009665  Shew185_0441  deoxyribodipyrimidine photolyase-related protein  77.71 
 
 		 525 aa  850    Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009784  VIBHAR_06692  hypothetical protein  69.73 
 
 		 514 aa  788    Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_0458  deoxyribodipyrimidine photolyase-related protein  78.08 
 
 		 521 aa  841    Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008700  Sama_2497  hypothetical protein  61.12 
 
 		 569 aa  692    Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_3704  deoxyribodipyrimidine photolyase-related protein  95.52 
 
 		 525 aa  1039    Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008345  Sfri_0777  deoxyribodipyrimidine photolyase-related protein  63.8 
 
 		 528 aa  702    Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_3526  deoxyribodipyrimidine photolyase-related protein  94.74 
 
 		 525 aa  1036    Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004347  SO_4169  hypothetical protein  100 
 
 		 521 aa  1097    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_000795  DNA photolyase  70.37 
 
 		 514 aa  805    Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_0467  deoxyribodipyrimidine photolyase-related protein  78.46 
 
 		 521 aa  844    Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011312  VSAL_I1806  hypothetical protein  59.11 
 
 		 523 aa  627  1e-178  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.501424  n/a   
 
 
-
 
NC_008709  Ping_1551  deoxyribodipyrimidine photolyase-related protein  57.62 
 
 		 516 aa  600  1e-170  Psychromonas ingrahamii 37  Bacteria  normal  0.585368  normal  0.610204 
 
 
-
 
NC_010506  Swoo_3929  deoxyribodipyrimidine photolyase-related protein  55.77 
 
 		 531 aa  593  1e-168  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008255  CHU_1054  hypothetical protein  49.42 
 
 		 521 aa  531  1e-149  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  0.624164 
 
 
-
 
NC_014230  CA2559_07801  deoxyribodipyrimidine photolyase related protein  49.19 
 
 		 511 aa  497  1e-139  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.179708  n/a   
 
 
-
 
NC_011662  Tmz1t_0531  deoxyribodipyrimidine photolyase-related protein  48.55 
 
 		 511 aa  464  1e-129  Thauera sp. MZ1T  Bacteria  normal  0.548466  n/a   
 
 
-
 
NC_010087  Bmul_5845  deoxyribodipyrimidine photolyase-related protein  44.44 
 
 		 509 aa  447  1.0000000000000001e-124  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010717  PXO_01727  deoxyribodipyrimidine photolyase-related protein  43.58 
 
 		 525 aa  433  1e-120  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_009050  Rsph17029_3804  deoxyribodipyrimidine photolyase-related protein  43.36 
 
 		 508 aa  410  1e-113  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.206805 
 
 
-
 
NC_007494  RSP_3077  hypothetical protein  43.16 
 
 		 508 aa  406  1.0000000000000001e-112  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_5454  deoxyribodipyrimidine photolyase-related protein  44.27 
 
 		 533 aa  406  1.0000000000000001e-112  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.120235 
 
 
-
 
NC_011138  MADE_02017  deoxyribodipyrimidine photolyase-related protein  41.54 
 
 		 512 aa  399  9.999999999999999e-111  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.571234  n/a   
 
 
-
 
NC_007963  Csal_0896  deoxyribodipyrimidine photolyase-related protein  41.45 
 
 		 524 aa  399  9.999999999999999e-111  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_009429  Rsph17025_3928  BCCT transporter  43.55 
 
 		 508 aa  393  1e-108  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.240048  normal  0.840759 
 
 
-
 
NC_009484  Acry_1728  deoxyribodipyrimidine photolyase-related protein  42.51 
 
 		 513 aa  394  1e-108  Acidiphilium cryptum JF-5  Bacteria  normal  0.483675  n/a   
 
 
-
 
NC_010505  Mrad2831_5626  deoxyribodipyrimidine photolyase-related protein  41.52 
 
 		 534 aa  389  1e-107  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.147008  normal  0.0556848 
 
 
-
 
NC_004578  PSPTO_3689  hypothetical protein  39.96 
 
 		 512 aa  389  1e-107  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.116484  n/a   
 
 
-
 
NC_007802  Jann_3641  deoxyribodipyrimidine photolyase-related protein  41.57 
 
 		 508 aa  391  1e-107  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.175337 
 
 
-
 
NC_009952  Dshi_0599  deoxyribodipyrimidine photolyase-related protein  41.93 
 
 		 508 aa  386  1e-106  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.315159  normal  1 
 
 
-
 
NC_008044  TM1040_2281  deoxyribodipyrimidine photolyase-related protein  42.72 
 
 		 507 aa  388  1e-106  Ruegeria sp. TM1040  Bacteria  normal  1  normal  0.558867 
 
 
-
 
NC_008740  Maqu_3101  deoxyribodipyrimidine photolyase-related protein  40.39 
 
 		 510 aa  383  1e-105  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_009512  Pput_3022  deoxyribodipyrimidine photolyase-related protein  41.02 
 
 		 508 aa  380  1e-104  Pseudomonas putida F1  Bacteria  normal  0.619117  normal  1 
 
 
-
 
NC_006369  lpl0260  hypothetical protein  39.96 
 
 		 512 aa  375  1e-103  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007492  Pfl01_2809  deoxyribodipyrimidine photolyase-like protein  40.2 
 
 		 512 aa  378  1e-103  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010501  PputW619_2999  deoxyribodipyrimidine photolyase-related protein  40.83 
 
 		 513 aa  377  1e-103  Pseudomonas putida W619  Bacteria  normal  1  normal  0.248063 
 
 
-
 
NC_002947  PP_2732  hypothetical protein  40.82 
 
 		 508 aa  379  1e-103  Pseudomonas putida KT2440  Bacteria  normal  0.380402  normal  1 
 
 
-
 
NC_007005  Psyr_1785  deoxyribodipyrimidine photolyase-like protein protein  40.98 
 
 		 519 aa  375  1e-102  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  hitchhiker  0.00721619 
 
 
-
 
NC_010524  Lcho_1250  deoxyribodipyrimidine photolyase-related protein  41.45 
 
 		 513 aa  375  1e-102  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000733779 
 
 
-
 
NC_009439  Pmen_1204  deoxyribodipyrimidine photolyase-related protein  39.65 
 
 		 520 aa  369  1e-101  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.000923921  normal  1 
 
 
-
 
NC_009485  BBta_2956  hypothetical protein  39.41 
 
 		 508 aa  364  2e-99  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.888276  normal  0.195961 
 
 
-
 
NC_009379  Pnuc_1608  deoxyribodipyrimidine photolyase-related protein  42.11 
 
 		 511 aa  361  2e-98  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008347  Mmar10_1000  deoxyribodipyrimidine photolyase-related protein  38.66 
 
 		 511 aa  360  3e-98  Maricaulis maris MCS10  Bacteria  normal  0.760695  normal  1 
 
 
-
 
NC_011901  Tgr7_1396  DNA photolyase  38.84 
 
 		 524 aa  360  5e-98  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.64137  n/a   
 
 
-
 
NC_007794  Saro_2394  deoxyribodipyrimidine photolyase-related protein  39.33 
 
 		 522 aa  359  6e-98  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_014148  Plim_3755  deoxyribodipyrimidine photolyase-related protein  38.76 
 
 		 532 aa  358  1.9999999999999998e-97  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_4518  deoxyribodipyrimidine photolyase-related protein  39.37 
 
 		 533 aa  352  1e-95  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A2055  putative alpha-deoxyribodipyrimidine photolyase-related protein  40.04 
 
 		 510 aa  349  7e-95  Methylibium petroleiphilum PM1  Bacteria  normal  0.527245  normal  1 
 
 
-
 
NC_013422  Hneap_1235  deoxyribodipyrimidine photolyase-related protein  39.22 
 
 		 511 aa  343  4e-93  Halothiobacillus neapolitanus c2  Bacteria  decreased coverage  0.00923753  n/a   
 
 
-
 
NC_013889  TK90_0821  deoxyribodipyrimidine photolyase-related protein  37.91 
 
 		 525 aa  338  9.999999999999999e-92  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.627102  normal  0.414989 
 
 
-
 
NC_011729  PCC7424_4487  deoxyribodipyrimidine photolyase-related protein  38.6 
 
 		 506 aa  319  6e-86  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_011884  Cyan7425_3982  deoxyribodipyrimidine photolyase-related protein  38.97 
 
 		 507 aa  313  3.9999999999999997e-84  Cyanothece sp. PCC 7425  Bacteria  normal  1  hitchhiker  0.00134489 
 
 
-
 
NC_011831  Cagg_3318  deoxyribodipyrimidine photolyase-related protein  38.57 
 
 		 497 aa  312  7.999999999999999e-84  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.420687  hitchhiker  0.00000494763 
 
 
-
 
NC_013946  Mrub_2169  deoxyribodipyrimidine photolyase-related protein  36.06 
 
 		 498 aa  310  2.9999999999999997e-83  Meiothermus ruber DSM 1279  Bacteria  normal  0.752806  normal  1 
 
 
-
 
NC_009767  Rcas_4251  deoxyribodipyrimidine photolyase-related protein  36.94 
 
 		 508 aa  309  9e-83  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013124  Afer_2012  deoxyribodipyrimidine photolyase-related protein  37.32 
 
 		 502 aa  304  2.0000000000000002e-81  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_007604  Synpcc7942_1171  hypothetical protein  36.4 
 
 		 503 aa  304  2.0000000000000002e-81  Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_0009  deoxyribodipyrimidine photolyase-related protein  35.69 
 
 		 508 aa  301  1e-80  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0417103 
 
 
-
 
NC_013202  Hmuk_2689  deoxyribodipyrimidine photolyase-related protein  34.74 
 
 		 508 aa  283  6.000000000000001e-75  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  0.14747 
 
 
-
 
NC_013158  Huta_0265  deoxyribodipyrimidine photolyase-related protein  35.36 
 
 		 510 aa  282  1e-74  Halorhabdus utahensis DSM 12940  Archaea  normal  0.319874  n/a   
 
 
-
 
NC_009338  Mflv_3490  deoxyribodipyrimidine photolyase-related protein  39.04 
 
 		 505 aa  271  2.9999999999999997e-71  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.189609 
 
 
-
 
NC_008146  Mmcs_2924  deoxyribodipyrimidine photolyase-related protein  35.06 
 
 		 525 aa  259  1e-67  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_2968  deoxyribodipyrimidine photolyase-related protein  35.06 
 
 		 525 aa  259  1e-67  Mycobacterium sp. KMS  Bacteria  normal  0.278599  normal  1 
 
 
-
 
NC_009077  Mjls_2939  deoxyribodipyrimidine photolyase-related protein  38.07 
 
 		 496 aa  258  1e-67  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.119687 
 
 
-
 
NC_013223  Dret_1823  deoxyribodipyrimidine photolyase-related protein  33.66 
 
 		 502 aa  258  2e-67  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0760009  normal  1 
 
 
-
 
NC_008726  Mvan_3270  deoxyribodipyrimidine photolyase-related protein  38.94 
 
 		 494 aa  257  3e-67  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.737297  normal  1 
 
 
-
 
NC_013132  Cpin_7174  deoxyribodipyrimidine photolyase-related protein  32.75 
 
 		 492 aa  256  5e-67  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_2791  deoxyribodipyrimidine photolyase-related protein  40.73 
 
 		 500 aa  254  2.0000000000000002e-66  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000121396  hitchhiker  0.0000216403 
 
 
-
 
NC_013440  Hoch_2030  deoxyribodipyrimidine photolyase-related protein  32.36 
 
 		 519 aa  247  4e-64  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0662893  normal  0.30492 
 
 
-
 
NC_009664  Krad_3082  deoxyribodipyrimidine photolyase-related protein  38.24 
 
 		 510 aa  245  9.999999999999999e-64  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.47785  normal  0.0294382 
 
 
-
 
NC_013757  Gobs_0647  deoxyribodipyrimidine photolyase-related protein  35.98 
 
 		 528 aa  236  7e-61  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_013521  Sked_26230  deoxyribodipyrimidine photolyase-related protein  32.02 
 
 		 532 aa  231  2e-59  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.355559  normal  0.113738 
 
 
-
 
NC_008817  P9515_04871  hypothetical protein  29.77 
 
 		 496 aa  223  4.9999999999999996e-57  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  1  n/a   
 
 
-
 
NC_007513  Syncc9902_1117  photolyase family protein  32.23 
 
 		 505 aa  223  9e-57  Synechococcus sp. CC9902  Bacteria  normal  0.322412  n/a   
 
 
-
 
NC_008312  Tery_3925  deoxyribodipyrimidine photolyase-related protein  31.17 
 
 		 476 aa  222  9.999999999999999e-57  Trichodesmium erythraeum IMS101  Bacteria  normal  1  hitchhiker  0.0027073 
 
 
-
 
NC_008228  Patl_2797  deoxyribodipyrimidine photolyase-related protein  31.29 
 
 		 503 aa  218  2.9999999999999998e-55  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_007577  PMT9312_0423  hypothetical protein  29.58 
 
 		 496 aa  217  5e-55  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  0.27403  n/a   
 
 
-
 
NC_009091  P9301_04471  hypothetical protein  29.79 
 
 		 496 aa  213  4.9999999999999996e-54  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  0.77539  n/a   
 
 
-
 
NC_007516  Syncc9605_1361  photolyase family protein  31.66 
 
 		 498 aa  209  8e-53  Synechococcus sp. CC9605  Bacteria  normal  0.174089  normal  0.307121 
 
 
-
 
NC_007335  PMN2A_0726  hypothetical protein  30.08 
 
 		 496 aa  209  1e-52  Prochlorococcus marinus str. NATL2A  Bacteria  normal  1  n/a   
 
 
-
 
NC_008816  A9601_04781  hypothetical protein  29.17 
 
 		 496 aa  208  2e-52  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.289419  n/a   
 
 
-
 
NC_008819  NATL1_15641  hypothetical protein  29.54 
 
 		 496 aa  204  3e-51  Prochlorococcus marinus str. NATL1A  Bacteria  normal  1  normal  0.681049 
 
 
-
 
NC_011886  Achl_2542  deoxyribodipyrimidine photolyase-related protein  29.07 
 
 		 537 aa  203  6e-51  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000228868 
 
 
-
 
NC_010531  Pnec_1265  deoxyribodipyrimidine photolyase-like protein  54.89 
 
 		 186 aa  149  1.0000000000000001e-34  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  1  normal  0.224709 
 
 
-
 
NC_004347  SO_4168  hypothetical protein  98.55 
 
 		 122 aa  142  9.999999999999999e-33  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
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