More than 300 homologs were found in PanDaTox collection
for query gene RoseRS_3371 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009767  Rcas_4135  putative PAS/PAC sensor protein  72.99 
 
 
650 aa  964    Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.479739  hitchhiker  0.00000143987 
 
 
-
 
NC_009523  RoseRS_3371  putative PAS/PAC sensor protein  100 
 
 
649 aa  1314    Roseiflexus sp. RS-1  Bacteria  normal  hitchhiker  0.00785192 
 
 
-
 
NC_010424  Daud_1728  putative PAS/PAC sensor protein  57.57 
 
 
1171 aa  449  1e-125  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.00367624  n/a   
 
 
-
 
NC_013216  Dtox_2814  putative PAS/PAC sensor protein  57.78 
 
 
1335 aa  444  1e-123  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.988399 
 
 
-
 
NC_009767  Rcas_3604  putative PAS/PAC sensor protein  54.79 
 
 
619 aa  403  1e-111  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.562878 
 
 
-
 
NC_008025  Dgeo_1999  metal dependent phosphohydrolase  47.93 
 
 
1237 aa  323  6e-87  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.974875 
 
 
-
 
NC_009523  RoseRS_0961  metal dependent phosphohydrolase  68.6 
 
 
212 aa  305  2.0000000000000002e-81  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_3194  putative PAS/PAC sensor protein  59.76 
 
 
740 aa  298  2e-79  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.27782  normal  0.189469 
 
 
-
 
NC_009972  Haur_3219  putative PAS/PAC sensor protein  54.07 
 
 
793 aa  280  6e-74  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0835  metal dependent phosphohydrolase  59.36 
 
 
247 aa  279  1e-73  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1474  response regulator receiver modulated metal dependent phosphohydrolase  64.92 
 
 
345 aa  278  2e-73  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2753  hypothetical protein  62.25 
 
 
308 aa  277  5e-73  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0863  response regulator receiver modulated metal dependent phosphohydrolase  67.04 
 
 
351 aa  273  7e-72  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.297515  normal  0.141829 
 
 
-
 
NC_013522  Taci_1598  metal dependent phosphohydrolase  63.3 
 
 
547 aa  257  4e-67  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_1237  metal dependent phosphohydrolase  53.23 
 
 
286 aa  238  3e-61  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.0933619 
 
 
-
 
NC_011661  Dtur_1217  metal dependent phosphohydrolase  35.65 
 
 
371 aa  219  2e-55  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4444  response regulator receiver modulated metal dependent phosphohydrolase  34.91 
 
 
526 aa  208  2e-52  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_2498  response regulator receiver modulated metal dependent phosphohydrolase  54.17 
 
 
367 aa  207  4e-52  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.751736 
 
 
-
 
NC_011891  A2cp1_2101  response regulator receiver modulated metal dependent phosphohydrolase  49.23 
 
 
357 aa  201  3.9999999999999996e-50  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2031  response regulator receiver modulated metal dependent phosphohydrolase  49.23 
 
 
357 aa  201  3.9999999999999996e-50  Anaeromyxobacter sp. K  Bacteria  normal  0.306573  n/a   
 
 
-
 
NC_007760  Adeh_1829  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  48.72 
 
 
357 aa  199  2.0000000000000003e-49  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0032  putative PAS/PAC sensor protein  26.93 
 
 
632 aa  197  6e-49  Thermoanaerobacter sp. X514  Bacteria  normal  0.0790714  n/a   
 
 
-
 
NC_014213  Mesil_3410  hypothetical protein  45.45 
 
 
1333 aa  196  1e-48  Meiothermus silvanus DSM 9946  Bacteria  normal  0.277305  normal  0.24869 
 
 
-
 
NC_009253  Dred_3089  metal dependent phosphohydrolase  33.42 
 
 
366 aa  192  1e-47  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2374  response regulator receiver modulated metal dependent phosphohydrolase  43.63 
 
 
348 aa  192  1e-47  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2407  response regulator receiver modulated metal dependent phosphohydrolase  45.24 
 
 
347 aa  192  2e-47  Geobacter bemidjiensis Bem  Bacteria  normal  0.21688  n/a   
 
 
-
 
NC_008607  Ppro_3640  metal dependent phosphohydrolase  51.37 
 
 
320 aa  191  4e-47  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0279  metal dependent phosphohydrolase  34.4 
 
 
363 aa  188  2e-46  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0258813  n/a   
 
 
-
 
NC_009483  Gura_0079  metal dependent phosphohydrolase  53.16 
 
 
320 aa  188  3e-46  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1090  metal dependent phosphohydrolase  42.15 
 
 
698 aa  187  4e-46  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000111355 
 
 
-
 
NC_002939  GSU1007  GAF domain/HD domain-containing protein  39.6 
 
 
550 aa  187  5e-46  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3173  metal dependent phosphohydrolase  32.72 
 
 
713 aa  187  7e-46  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3570  metal dependent phosphohydrolase  33.07 
 
 
571 aa  186  1.0000000000000001e-45  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1811  response regulator receiver modulated metal dependent phosphohydrolase  44.76 
 
 
347 aa  186  1.0000000000000001e-45  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00843757 
 
 
-
 
NC_002939  GSU1654  response regulator, putative  41.23 
 
 
349 aa  185  2.0000000000000003e-45  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0764  metal dependent phosphohydrolase  46.83 
 
 
438 aa  186  2.0000000000000003e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011831  Cagg_2395  response regulator receiver modulated metal dependent phosphohydrolase  45.12 
 
 
491 aa  185  2.0000000000000003e-45  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.357639  normal  0.166027 
 
 
-
 
NC_007517  Gmet_1919  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  46.99 
 
 
350 aa  184  3e-45  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.179225 
 
 
-
 
NC_013946  Mrub_1050  metal dependent phosphohydrolase  47.22 
 
 
1313 aa  184  4.0000000000000006e-45  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_1321  HD-GYP domain-containing protein  29.85 
 
 
848 aa  184  4.0000000000000006e-45  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1991  response regulator receiver modulated metal dependent phosphohydrolase  46.08 
 
 
357 aa  184  5.0000000000000004e-45  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_1285  metal dependent phosphohydrolase  42.15 
 
 
465 aa  183  9.000000000000001e-45  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1756  metal dependent phosphohydrolase  31.37 
 
 
710 aa  182  1e-44  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2145  metal dependent phosphohydrolase  36.41 
 
 
565 aa  182  2e-44  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_2045  metal dependent phosphohydrolase  32.77 
 
 
373 aa  182  2e-44  Geobacter lovleyi SZ  Bacteria  normal  0.803605  n/a   
 
 
-
 
NC_007517  Gmet_2559  metal dependent phosphohydrolase  37.1 
 
 
553 aa  181  2.9999999999999997e-44  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000107172 
 
 
-
 
NC_013385  Adeg_1201  metal dependent phosphohydrolase  33.33 
 
 
719 aa  181  4e-44  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2643  metal dependent phosphohydrolase  39.33 
 
 
861 aa  181  4.999999999999999e-44  Meiothermus ruber DSM 1279  Bacteria  normal  0.120686  normal 
 
 
-
 
NC_014212  Mesil_2627  metal dependent phosphohydrolase  37.67 
 
 
651 aa  180  5.999999999999999e-44  Meiothermus silvanus DSM 9946  Bacteria  normal  0.907693  normal 
 
 
-
 
NC_009767  Rcas_3527  metal dependent phosphohydrolase  33.25 
 
 
562 aa  179  1e-43  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_2366  response regulator  30.48 
 
 
525 aa  179  2e-43  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009253  Dred_2727  metal dependent phosphohydrolase  38.58 
 
 
387 aa  179  2e-43  Desulfotomaculum reducens MI-1  Bacteria  normal  0.328155  n/a   
 
 
-
 
NC_012560  Avin_50640  response regulator with metal dependent phosphohydrolase activity (two-component)  44.78 
 
 
347 aa  179  2e-43  Azotobacter vinelandii DJ  Bacteria  normal  0.121542  n/a   
 
 
-
 
NC_007644  Moth_2150  metal dependent phosphohydrolase  32.04 
 
 
718 aa  178  2e-43  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.070124 
 
 
-
 
NC_010424  Daud_0771  diguanylate cyclase with PAS/PAC sensor  33.42 
 
 
880 aa  178  3e-43  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_0538  diguanylate cyclase with PAS/PAC sensor  33.42 
 
 
860 aa  178  3e-43  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.883741  n/a   
 
 
-
 
NC_013216  Dtox_4196  response regulator receiver modulated metal dependent phosphohydrolase  48.26 
 
 
350 aa  178  4e-43  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_1184  response regulator receiver modulated metal dependent phosphohydrolase  49.44 
 
 
394 aa  177  7e-43  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.185308 
 
 
-
 
NC_007760  Adeh_1136  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  50 
 
 
391 aa  177  7e-43  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.942852  n/a   
 
 
-
 
NC_008009  Acid345_1178  metal dependent phosphohydrolase  45.59 
 
 
539 aa  177  7e-43  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0061  metal dependent phosphohydrolase  35.43 
 
 
465 aa  175  1.9999999999999998e-42  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_1491  response regulator receiver modulated metal dependent phosphohydrolase  38.27 
 
 
513 aa  175  1.9999999999999998e-42  Shewanella baltica OS223  Bacteria  normal  0.0411849  normal  0.405552 
 
 
-
 
NC_009483  Gura_1941  metal dependent phosphohydrolase  31.31 
 
 
357 aa  175  1.9999999999999998e-42  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000817968  n/a   
 
 
-
 
NC_010424  Daud_0691  metal dependent phosphohydrolase  32.39 
 
 
392 aa  174  2.9999999999999996e-42  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  48 
 
 
331 aa  175  2.9999999999999996e-42  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3231  response regulator receiver modulated metal dependent phosphohydrolase  48 
 
 
331 aa  175  2.9999999999999996e-42  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3014  response regulator receiver modulated metal dependent phosphohydrolase  38.27 
 
 
513 aa  174  3.9999999999999995e-42  Shewanella baltica OS195  Bacteria  normal  normal  0.152382 
 
 
-
 
NC_009665  Shew185_2885  response regulator receiver modulated metal dependent phosphohydrolase  38.27 
 
 
513 aa  174  3.9999999999999995e-42  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1196  response regulator receiver modulated metal dependent phosphohydrolase  48.88 
 
 
375 aa  174  3.9999999999999995e-42  Anaeromyxobacter sp. K  Bacteria  normal  0.318732  n/a   
 
 
-
 
NC_009052  Sbal_2868  response regulator receiver modulated metal dependent phosphohydrolase  38.27 
 
 
513 aa  174  3.9999999999999995e-42  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2670  metal dependent phosphohydrolase, HD region  43.35 
 
 
344 aa  174  5e-42  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_1265  response regulator receiver modulated metal dependent phosphohydrolase  48.88 
 
 
375 aa  174  5.999999999999999e-42  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.297476  n/a   
 
 
-
 
NC_011661  Dtur_0226  metal dependent phosphohydrolase  31.43 
 
 
770 aa  173  6.999999999999999e-42  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  43.33 
 
 
328 aa  173  6.999999999999999e-42  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3638  metal dependent phosphohydrolase  49.72 
 
 
252 aa  173  9e-42  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3334  response regulator receiver modulated metal dependent phosphohydrolase  48 
 
 
331 aa  173  9e-42  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0220  metal dependent phosphohydrolase  46.7 
 
 
371 aa  173  1e-41  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0338  response regulator receiver modulated metal dependent phosphohydrolase  32.6 
 
 
513 aa  172  1e-41  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.102838 
 
 
-
 
NC_010002  Daci_6015  response regulator receiver modulated metal dependent phosphohydrolase  49.7 
 
 
333 aa  172  2e-41  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  46.86 
 
 
331 aa  172  2e-41  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1097  response regulator receiver modulated metal dependent phosphohydrolase  44.5 
 
 
391 aa  172  2e-41  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.151318 
 
 
-
 
NC_008609  Ppro_1378  response regulator receiver modulated metal dependent phosphohydrolase  40 
 
 
348 aa  172  2e-41  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00581699  n/a   
 
 
-
 
NC_009616  Tmel_1194  metal dependent phosphohydrolase  44.89 
 
 
339 aa  172  3e-41  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1437  metal dependent phosphohydrolase  47.31 
 
 
471 aa  171  4e-41  Meiothermus ruber DSM 1279  Bacteria  normal  0.846254  normal 
 
 
-
 
NC_007517  Gmet_0018  metal dependent phosphohydrolase  42.93 
 
 
481 aa  170  7e-41  Geobacter metallireducens GS-15  Bacteria  normal  0.161625  normal 
 
 
-
 
NC_013173  Dbac_2325  response regulator receiver modulated metal dependent phosphohydrolase  42.52 
 
 
362 aa  170  8e-41  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.663275  n/a   
 
 
-
 
NC_010814  Glov_0752  metal dependent phosphohydrolase  41.12 
 
 
306 aa  170  9e-41  Geobacter lovleyi SZ  Bacteria  normal  0.0100091  n/a   
 
 
-
 
NC_009767  Rcas_0845  response regulator receiver modulated metal dependent phosphohydrolase  32.97 
 
 
508 aa  170  9e-41  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.903712  hitchhiker  0.00198769 
 
 
-
 
NC_008576  Mmc1_3408  response regulator receiver modulated metal dependent phosphohydrolase  44.04 
 
 
346 aa  169  1e-40  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2655  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  43.78 
 
 
353 aa  169  2e-40  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_0497  response regulator receiver modulated metal dependent phosphohydrolase  44.97 
 
 
432 aa  169  2e-40  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2105  response regulator receiver modulated metal dependent phosphohydrolase  30.31 
 
 
525 aa  169  2e-40  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00173233  normal  0.407049 
 
 
-
 
NC_013552  DhcVS_1162  GGDEF domain protein  44.39 
 
 
836 aa  169  2e-40  Dehalococcoides sp. VS  Bacteria  normal  0.359678  n/a   
 
 
-
 
NC_009486  Tpet_0738  response regulator receiver modulated metal dependent phosphohydrolase  49.44 
 
 
368 aa  168  2e-40  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0998  metal dependent phosphohydrolase  35.71 
 
 
467 aa  168  2.9999999999999998e-40  Thermosipho melanesiensis BI429  Bacteria  decreased coverage  0.000200271  n/a   
 
 
-
 
NC_013223  Dret_2370  response regulator receiver modulated metal dependent phosphohydrolase  44.6 
 
 
370 aa  168  2.9999999999999998e-40  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2755  response regulator receiver modulated metal dependent phosphohydrolase  36.44 
 
 
520 aa  168  2.9999999999999998e-40  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_1191  diguanylate cyclase with GAF sensor  45.86 
 
 
841 aa  168  2.9999999999999998e-40  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_15930  metal dependent phosphohydrolase  40.19 
 
 
718 aa  167  4e-40  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0702  response regulator receiver modulated metal dependent phosphohydrolase  44.69 
 
 
331 aa  167  5e-40  Roseiflexus sp. RS-1  Bacteria  normal  0.140022  normal 
 
 
-
 
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