More than 300 homologs were found in PanDaTox collection
for query gene Gbem_2407 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012918  GM21_1811  response regulator receiver modulated metal dependent phosphohydrolase  95.97 
 
 
347 aa  682    Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00843757 
 
 
-
 
NC_011146  Gbem_2407  response regulator receiver modulated metal dependent phosphohydrolase  100 
 
 
347 aa  708    Geobacter bemidjiensis Bem  Bacteria  normal  0.21688  n/a   
 
 
-
 
NC_009483  Gura_2374  response regulator receiver modulated metal dependent phosphohydrolase  71.01 
 
 
348 aa  516  1.0000000000000001e-145  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1654  response regulator, putative  64.27 
 
 
349 aa  474  1e-133  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1919  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  63.01 
 
 
350 aa  466  9.999999999999999e-131  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.179225 
 
 
-
 
NC_008609  Ppro_1378  response regulator receiver modulated metal dependent phosphohydrolase  57.35 
 
 
348 aa  426  1e-118  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00581699  n/a   
 
 
-
 
NC_007760  Adeh_1829  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  46.27 
 
 
357 aa  320  3e-86  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1991  response regulator receiver modulated metal dependent phosphohydrolase  45.97 
 
 
357 aa  318  7.999999999999999e-86  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_2031  response regulator receiver modulated metal dependent phosphohydrolase  45.97 
 
 
357 aa  318  1e-85  Anaeromyxobacter sp. K  Bacteria  normal  0.306573  n/a   
 
 
-
 
NC_011891  A2cp1_2101  response regulator receiver modulated metal dependent phosphohydrolase  45.97 
 
 
357 aa  318  1e-85  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_1406  response regulator  45.73 
 
 
351 aa  302  5.000000000000001e-81  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2498  response regulator receiver modulated metal dependent phosphohydrolase  43.62 
 
 
367 aa  292  7e-78  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.751736 
 
 
-
 
NC_002936  DET0624  response regulator  43.6 
 
 
334 aa  285  7e-76  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0597  response regulator receiver modulated metal dependent phosphohydrolase  43.9 
 
 
334 aa  283  4.0000000000000003e-75  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_565  response regulator receiver:metal-dependent phosphohydrolase, HD subdomain protein  42.64 
 
 
334 aa  280  3e-74  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_0677  response regulator receiver modulated metal dependent phosphohydrolase  40.9 
 
 
343 aa  258  1e-67  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.756866  n/a   
 
 
-
 
NC_011831  Cagg_0863  response regulator receiver modulated metal dependent phosphohydrolase  40.9 
 
 
351 aa  248  1e-64  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.297515  normal  0.141829 
 
 
-
 
NC_011145  AnaeK_1196  response regulator receiver modulated metal dependent phosphohydrolase  38.82 
 
 
375 aa  248  1e-64  Anaeromyxobacter sp. K  Bacteria  normal  0.318732  n/a   
 
 
-
 
NC_009675  Anae109_1184  response regulator receiver modulated metal dependent phosphohydrolase  39.49 
 
 
394 aa  247  2e-64  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.185308 
 
 
-
 
NC_011891  A2cp1_1265  response regulator receiver modulated metal dependent phosphohydrolase  38.82 
 
 
375 aa  246  3e-64  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.297476  n/a   
 
 
-
 
NC_007760  Adeh_1136  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  39.12 
 
 
391 aa  245  8e-64  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.942852  n/a   
 
 
-
 
NC_013173  Dbac_2325  response regulator receiver modulated metal dependent phosphohydrolase  37.85 
 
 
362 aa  229  6e-59  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.663275  n/a   
 
 
-
 
NC_009972  Haur_1474  response regulator receiver modulated metal dependent phosphohydrolase  38.76 
 
 
345 aa  221  9.999999999999999e-57  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0080  response regulator receiver modulated metal dependent phosphohydrolase  35.19 
 
 
357 aa  216  4e-55  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0762  response regulator receiver modulated metal dependent phosphohydrolase  36.18 
 
 
368 aa  215  9.999999999999999e-55  Thermotoga sp. RQ2  Bacteria  normal  0.218112  n/a   
 
 
-
 
NC_009523  RoseRS_0702  response regulator receiver modulated metal dependent phosphohydrolase  37.98 
 
 
331 aa  214  1.9999999999999998e-54  Roseiflexus sp. RS-1  Bacteria  normal  0.140022  normal 
 
 
-
 
NC_013173  Dbac_2645  response regulator receiver modulated metal dependent phosphohydrolase  34.22 
 
 
364 aa  213  3.9999999999999995e-54  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_3074  response regulator receiver modulated metal dependent phosphohydrolase  34.64 
 
 
363 aa  212  5.999999999999999e-54  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009486  Tpet_0738  response regulator receiver modulated metal dependent phosphohydrolase  36.76 
 
 
368 aa  212  5.999999999999999e-54  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0063  response regulator receiver modulated metal dependent phosphohydrolase  34.31 
 
 
357 aa  210  3e-53  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.56416e-22 
 
 
-
 
NC_013216  Dtox_4196  response regulator receiver modulated metal dependent phosphohydrolase  37.69 
 
 
350 aa  210  4e-53  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2574  response regulator  37.39 
 
 
368 aa  208  1e-52  Geobacter sulfurreducens PCA  Bacteria  normal  0.482084  n/a   
 
 
-
 
NC_007298  Daro_3285  response regulator receiver  36.8 
 
 
362 aa  206  6e-52  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0298  response regulator receiver modulated metal dependent phosphohydrolase  37.2 
 
 
331 aa  204  1e-51  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.7054  normal  0.177262 
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  38.6 
 
 
340 aa  204  1e-51  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.129077 
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  38.01 
 
 
338 aa  203  3e-51  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  38.01 
 
 
338 aa  203  3e-51  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3408  response regulator receiver modulated metal dependent phosphohydrolase  36.63 
 
 
346 aa  204  3e-51  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0007  response regulator receiver modulated metal dependent phosphohydrolase  38.39 
 
 
379 aa  202  5e-51  Dechloromonas aromatica RCB  Bacteria  normal  0.829613  normal  0.0284762 
 
 
-
 
NC_013173  Dbac_2017  response regulator receiver modulated metal dependent phosphohydrolase  37.69 
 
 
379 aa  202  5e-51  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.98115  n/a   
 
 
-
 
NC_010814  Glov_2722  response regulator receiver modulated metal dependent phosphohydrolase  34.18 
 
 
378 aa  202  8e-51  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2904  histidine kinase  35.24 
 
 
876 aa  202  9e-51  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0209815 
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  38.6 
 
 
339 aa  201  9.999999999999999e-51  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_1546  response regulator receiver modulated metal dependent phosphohydrolase  36.04 
 
 
368 aa  201  9.999999999999999e-51  Geobacter lovleyi SZ  Bacteria  normal  0.61009  n/a   
 
 
-
 
NC_010814  Glov_3523  response regulator receiver modulated metal dependent phosphohydrolase  37.76 
 
 
363 aa  201  9.999999999999999e-51  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2457  metal dependent phosphohydrolase  32.52 
 
 
358 aa  201  9.999999999999999e-51  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3165  response regulator receiver modulated metal dependent phosphohydrolase  36.36 
 
 
367 aa  201  9.999999999999999e-51  Magnetococcus sp. MC-1  Bacteria  normal  0.0569095  normal  0.0154692 
 
 
-
 
NC_009972  Haur_2699  response regulator receiver modulated metal dependent phosphohydrolase  34.94 
 
 
328 aa  201  9.999999999999999e-51  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3046  response regulator receiver modulated metal dependent phosphohydrolase  34.33 
 
 
365 aa  200  1.9999999999999998e-50  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0429754  n/a   
 
 
-
 
NC_009654  Mmwyl1_1086  response regulator receiver modulated metal dependent phosphohydrolase  37.16 
 
 
331 aa  201  1.9999999999999998e-50  Marinomonas sp. MWYL1  Bacteria  normal  0.226857  hitchhiker  0.0000000112469 
 
 
-
 
NC_007947  Mfla_2655  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  36.61 
 
 
353 aa  200  3e-50  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  37.72 
 
 
338 aa  200  3e-50  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  37.43 
 
 
338 aa  200  3e-50  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0663  response regulator receiver  35.28 
 
 
340 aa  199  6e-50  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  38.05 
 
 
339 aa  199  7e-50  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3111  response regulator receiver protein  36.01 
 
 
328 aa  198  1.0000000000000001e-49  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0637882 
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  37.54 
 
 
328 aa  198  1.0000000000000001e-49  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0639  response regulator receiver modulated metal dependent phosphohydrolase  33.92 
 
 
345 aa  197  3e-49  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_2179  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  36.47 
 
 
348 aa  197  3e-49  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.378064  n/a   
 
 
-
 
NC_007520  Tcr_1911  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  40.7 
 
 
268 aa  196  4.0000000000000005e-49  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0445959  n/a   
 
 
-
 
NC_008322  Shewmr7_3549  response regulator receiver modulated metal dependent phosphohydrolase  36.28 
 
 
348 aa  196  5.000000000000001e-49  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2382  response regulator receiver modulated metal dependent phosphohydrolase  36.39 
 
 
359 aa  196  7e-49  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_4270  response regulator receiver modulated metal dependent phosphohydrolase  32.34 
 
 
361 aa  195  8.000000000000001e-49  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0481  response regulator receiver modulated metal dependent phosphohydrolase  36.28 
 
 
348 aa  195  8.000000000000001e-49  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0860  response regulator  36.84 
 
 
339 aa  195  1e-48  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  36.36 
 
 
337 aa  195  1e-48  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  36.55 
 
 
338 aa  194  2e-48  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  36.55 
 
 
338 aa  194  2e-48  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  36.55 
 
 
338 aa  194  2e-48  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  36.55 
 
 
338 aa  194  2e-48  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  36.83 
 
 
331 aa  194  2e-48  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008741  Dvul_3024  response regulator receiver modulated metal dependent phosphohydrolase  32.96 
 
 
363 aa  194  3e-48  Desulfovibrio vulgaris DP4  Bacteria  normal  0.433593  n/a   
 
 
-
 
NC_009483  Gura_4027  response regulator receiver modulated metal dependent phosphohydrolase  34.02 
 
 
346 aa  194  3e-48  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000000247639  n/a   
 
 
-
 
NC_011769  DvMF_1097  response regulator receiver modulated metal dependent phosphohydrolase  34.43 
 
 
391 aa  193  4e-48  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.151318 
 
 
-
 
NC_007413  Ava_1777  metal dependent phosphohydrolase, HD region with response regulator receiver modulation  33.23 
 
 
414 aa  192  7e-48  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_3371  putative PAS/PAC sensor protein  45.24 
 
 
649 aa  192  1e-47  Roseiflexus sp. RS-1  Bacteria  normal  hitchhiker  0.00785192 
 
 
-
 
NC_012560  Avin_25160  response regulator  36.52 
 
 
356 aa  191  2e-47  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1875  response regulator receiver modulated metal dependent phosphohydrolase  32.04 
 
 
361 aa  191  2e-47  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_50640  response regulator with metal dependent phosphohydrolase activity (two-component)  37.43 
 
 
347 aa  191  2e-47  Azotobacter vinelandii DJ  Bacteria  normal  0.121542  n/a   
 
 
-
 
NC_008577  Shewana3_3334  response regulator receiver modulated metal dependent phosphohydrolase  36.12 
 
 
331 aa  191  2e-47  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1891  response regulator  32.45 
 
 
379 aa  190  2.9999999999999997e-47  Geobacter sulfurreducens PCA  Bacteria  normal  0.750204  n/a   
 
 
-
 
NC_011901  Tgr7_0081  two component transcriptional regulator, AraC family  35.31 
 
 
399 aa  190  2.9999999999999997e-47  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  35.82 
 
 
331 aa  190  2.9999999999999997e-47  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3231  response regulator receiver modulated metal dependent phosphohydrolase  35.82 
 
 
331 aa  190  2.9999999999999997e-47  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_2753  hypothetical protein  45.96 
 
 
308 aa  190  4e-47  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1463  response regulator receiver modulated metal dependent phosphohydrolase  35.23 
 
 
364 aa  190  4e-47  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.404054 
 
 
-
 
NC_010681  Bphyt_0187  response regulator receiver modulated metal dependent phosphohydrolase  34.81 
 
 
354 aa  190  4e-47  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0125166 
 
 
-
 
NC_007908  Rfer_3638  metal dependent phosphohydrolase  53.11 
 
 
252 aa  189  5.999999999999999e-47  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03429  two-component system response regulator (hybrid family) protein  35.31 
 
 
358 aa  189  7e-47  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3604  putative PAS/PAC sensor protein  46.67 
 
 
619 aa  189  7e-47  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.562878 
 
 
-
 
NC_010717  PXO_00070  Two-component system response regulator RpfG  34.41 
 
 
353 aa  189  8e-47  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0844737  n/a   
 
 
-
 
NC_009943  Dole_1136  response regulator receiver modulated metal dependent phosphohydrolase  34.32 
 
 
348 aa  188  1e-46  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2978  response regulator receiver modulated metal dependent phosphohydrolase  34.17 
 
 
369 aa  188  1e-46  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.806511 
 
 
-
 
NC_008576  Mmc1_3072  response regulator receiver modulated metal dependent phosphohydrolase  35.69 
 
 
353 aa  188  1e-46  Magnetococcus sp. MC-1  Bacteria  normal  hitchhiker  0.000480818 
 
 
-
 
NC_009943  Dole_3257  response regulator receiver modulated metal dependent phosphohydrolase  32.28 
 
 
358 aa  188  2e-46  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  36.31 
 
 
331 aa  187  2e-46  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0653  response regulator receiver modulated metal dependent phosphohydrolase  32.45 
 
 
345 aa  187  3e-46  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.6785900000000002e-24 
 
 
-
 
NC_014148  Plim_0679  response regulator receiver  33.14 
 
 
337 aa  186  4e-46  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.0836964  n/a   
 
 
-
 
NC_009767  Rcas_4135  putative PAS/PAC sensor protein  45.83 
 
 
650 aa  186  5e-46  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.479739  hitchhiker  0.00000143987 
 
 
-
 
NC_013512  Sdel_0912  metal-dependent phosphohydrolase HD sub domain protein  33.71 
 
 
371 aa  186  5e-46  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
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