Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3527 |
Symbol | |
ID | 5541026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4593505 |
End bp | 4595193 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640895645 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_001433595 |
Protein GI | 156743466 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2206] HD-GYP domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATCACG ACCTGACGAT ACACCGCGTC TTGAATGTGA TTCAGCGCGC CACCCAAACG GCTTCACAAA CTCACCTGAC TGCGCTGCTC GACCGCACCC TCGATCTGTT TGTTGAAGAA GCGCATGCCG AAGCCGGAAC GCTCTATCTG TACGACCCGG AACATGATGC GCTCGTCTTT CACGTTGTCA AGGGTGACGC GGCGAGCCAG CGATTGCTTG GCATGCGCAT TCCGGCGAGC CGTGGGGTAG CGGGCGCTGC GCTGCGTGCG CGTGAGCCGA TCTTCGTCCA CAATGTTGCC GAAGACCCGC GTTGGGACCG GAGCATCGGC GAACTGGCAT CACTCCAGTT GCGCACCATG TACTGCCTGC CGTTGATCAT CGATGATCGA CCGGTTGGTG TGGTGCAGGT CTTCAATCTG CCCGCTGACG CAATCGATGC CGATGAAGAA CTGATACTGC TCCGCATCCT GGGCAATGTG ATGGTGAATG TCATCGACAA GACGCGCCTG CTCGATGAGA CCCATCGCCG TGAACGGCGG CAGCGCGCGC TGGCGGATAT TGCCGCGCGC TTGACAACGA CGCTGGATCG TCAACAGTTA TTGACCCTGA TCATGGACTA TGCCCGTGAC CTGCTCAACT GCGAGGCGAC GTCGGTATGG GAAATCGACG ATGAAGACGA GCCGAACCCG GTGCTGCGCT CTCATGTCGC CACCGGATCG CGCGGCGAAA AAGTCACCGG CGTCACGGTG CCGTTTGGGC AGGGGATCAT CGGGCATGTC GTTGCGACCG GCGCAATCAT CCGGTTGGAC GATGTGCGCA ACGACGCGCG TCATTACCAG GGGGTCGATC AGCAGAGCGG CTTTGAGACG CGCTCGATCC TCTGTGTGCC GCTCCACGCG CCGAGCATCG AACTCGGCGC GGAGCGTGGT CGTGTCGAAG CGCGCATCAT CGGCGGCGCC CAGGCGCTCA ACAAAATCGG CGGTCCGTTC ACCGATGATG ACGTCGCCTT GTTCGAGGCG TTTGCCAACC TTGCGGCGAC GGTGTTGCAA CTCTCGCGTC TGTATGCCGA TACGCAAAAC CTGCTGCTCG GCATGATCAA GGCGCTCGTC GAAGCTGTGG ATGCGCGTGA CCGCAACAAT CAGCGCCACT CGCGCCGTGT CTCCGATTTT TCGGTTGCTA TCGCGGAAGA ATTGGGGTTG TCCGATGAGC AAATCTTCCA TGTGCGCCTT GGCAGCCTGC TCCACGACAT CGGGAAGATT GGCGTGCCGG ACGCGATCCT CGACAAGCCG GGGCGCCTGA CCGACGAAGA ATTGGTCGAG ATGCGCAGCC ACACGACAAA GGGCTATGAG ATCATGAGCC AGGAGGAACT CAAGCGTCTG CTGCGCGTCG AATTGCCGGC GCTCTTGCAG CACCACGAAC GGCTCGACGG TAACGGCTAT CCACACGGCA TCTCCGGCGA CCGGATTTCC TGGATTGCGC GGATTGTTGC CGTCGCCGAT GTGTTCGATG CGCTGACCAG CACTCGACCG TACAAGGAAC CCTGGAGTGC AGAGCGCGCG ATTGCGTATC TTACAGAACG CAAGGGGGTC GAGTTCGATG CCGCCTGCGT CGAGGCGCTT GCGCGCGCGC GCGCAAAGGG GCATCCGCTG GTCAAAACGC AGGTCGAGCG TGCTATGGAA AGGGGGTGA
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Protein sequence | MDHDLTIHRV LNVIQRATQT ASQTHLTALL DRTLDLFVEE AHAEAGTLYL YDPEHDALVF HVVKGDAASQ RLLGMRIPAS RGVAGAALRA REPIFVHNVA EDPRWDRSIG ELASLQLRTM YCLPLIIDDR PVGVVQVFNL PADAIDADEE LILLRILGNV MVNVIDKTRL LDETHRRERR QRALADIAAR LTTTLDRQQL LTLIMDYARD LLNCEATSVW EIDDEDEPNP VLRSHVATGS RGEKVTGVTV PFGQGIIGHV VATGAIIRLD DVRNDARHYQ GVDQQSGFET RSILCVPLHA PSIELGAERG RVEARIIGGA QALNKIGGPF TDDDVALFEA FANLAATVLQ LSRLYADTQN LLLGMIKALV EAVDARDRNN QRHSRRVSDF SVAIAEELGL SDEQIFHVRL GSLLHDIGKI GVPDAILDKP GRLTDEELVE MRSHTTKGYE IMSQEELKRL LRVELPALLQ HHERLDGNGY PHGISGDRIS WIARIVAVAD VFDALTSTRP YKEPWSAERA IAYLTERKGV EFDAACVEAL ARARAKGHPL VKTQVERAME RG
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