| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0771 |
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| Symbol | |
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| ID | 6025794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 798042 |
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| End bp | 800684 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641593588 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001716925 |
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| Protein GI | 169830943 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2206] HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain
[TIGR00277] uncharacterized domain HDIG |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGGCAAC GGGTGGTGGA TAGCGTGAAC TCAGGACGGC GAACGGAAAA GACAGAGTGG
GGACTGGGCT TTCTCGAGAG GATCGTCGAC TCCCTCCCGG ATGGCGTCCT TGCCGTCGAC
CGCGAAGGCA GGGCGATCGT GTGGAACCGG GCCGCGGAAG AAATGACGGG AGTCAGGAAG
GAAGAAGTGC TGGGCAGGGG CGAATACGCC TATGCCGTCC CGTTTTACGG GGAACCCAGG
CCCATCCTCG TAAACATCCT GCTGGGCAAC GGTAGGGAGT GGGAGCGGAA GTACGAGAAA
ATCGAGCGGA AGGGCCAGGT TCTTGTCGGC GAAGGTTTTG CCCCTTACGC TTACGGCGGC
AGAGGCCTTC ATTTCTGGAC CATTGCGGCG CCAATCTATG ATGAAGCGGG AAACTTGCTC
GGGGCGGTCC AGTGCATCCG CGACATCGGC GAGCGCAAGC AGATGGAGGA TAAACTGAGG
CACTGGAGCA CCCATGACGC TCTCACCGGG CTTTACAACC GCGCCTTCTT CGAGGAGGAA
CTGCGGCGGC TGGAGAAAGG TCGCTCCTTT CCTGTAAGTC TCATCCTCTG CGACATCGAC
GACCTGAAGG TGGTTAACGA CACCTTGGGC CACGCGCGGG GCGACGAGCT CTTACGCCGC
GCCGCCAGGG TGATCGCCAG CTGCGTCCGG GGGTCCGACC TGGTGGCCCG GGTCGGCGGA
GATGAATTTG CCGCGGTGCT GCCGCAAACG GACCGGGCGG CGGCGGAGGA AGTGGCGCGG
CGCATAACCC AGGCCGCGGC GGAGGATAAT GCGGGGCGCC CCGAGTTCCC CCTGAGCATT
TCGGTGGGCA CGGCCACGGC CGAAGATCCG GGGCGTCCGC TGGTCGAGGC ATACAAAGAG
GCCGACGACG CCATGTACAG GGACAAGCTG GCCCGGGGGG CGGAGCCGCG AGAGGCCTGG
AAGAAAGCGG ACGAAATGGC CTTTCTCTAC GACTTCTCCC GAACGGTACA AGAAACCCTC
GAGGTAAGCG AGGTGGCGCA GCGGGCCCTG GAGGCGGTGC TGAAGGTGAC CGGCGCCACC
AGCGGGTCCG TGGTGATGCT GAGCGAGGAG ATGCCGGGGG CCCTGGCTGC CGAGACGGCG
GCGACCCTGG AGCCCGGCGA CGAGTTCCGG GTCGTGCCGG CCGGCGAAGT CGTTGCCGCC
GTCGAGCGGG AAACGCGCGC CGTGCACTTC GACAGCCGCC CCGGAGCCGG TACGGCCGCA
GAAAGGCGGC CGGCGGTAGC CGTGCCCCTC ATGGTAGAGG GCAAGGTGAC GGGCGTGCTG
ACCATCGCGG GCCGGCCGGA AGGCGCGCCC TTCAGCGAGG AGGAGGCCGC TTTCTTGACC
ACCCTGGGCA CCGGCCTGGG GCTGACGCTG CAAAACGCCC GCCTTTATCG TCAACTCCAG
GCGAGGGCGG CCATGCTGGA ACGCCTGATC GAGCTGGGAC AGGCGCTGGC CGGCCACCTC
GAGGAGAGCA AGGTGCTCGA AGCAGCTCTG GCTGGTGTAG GGGAGGTCCT TGGCGCGCAG
TGGTATGCGC TGTGCCTGCT TGATGAGGAG ACGGGCGAAC TGGTGCTCAA GGCCAGCTCG
GGCATGAGCG CGGAGCTGCA GGGAAGAGCG GCCCGTGTCC GGCCGGAGGG CAGCCTGCTG
GGCGAAGTGC TCCGGAGAGG GGAGCCGGTG GCGGTGGACG ATACGGCCGC CGCCGGGCCC
GGCATGCAGC TGCCCTATTA CGCGCCCGAG ATGCGGGCGG TGGCTGTGGC GCCGGTAAGA
GCGGGGGGCA AGATTCTGGG CACCCTGAAG GTGTACTCTC CAGTACCGCG ACGCTGGTCA
GAAGAAGAAG TTGGGTATCT GGCCACCGTG GCGGGCCAGG TGGGCTTGGC GCTGGAAAAT
GCCCGCCTGT ACGCGTCCCT GCGCCAGTAC TACCTGAGCA CCCTGCAGGC GCTGGCAGCG
GCCCTGGAGG CCAAGGACAA GTATACGCGG GGGCACTCCG TGCGGGTGGC CCGGCTGGGG
CAGGCGTGCG CCCGGGCCCT GGGCTTAAGC GATGAGGAGC GGGAGCAGCT CTACCTAGCC
GCGCTCCTGC ACGACATAGG CAAAATCGGC ATACCCGAGA GCATTCTTTT AAAGCCCGGA
CCCCTTGAGC CGGCGGAGTG GGAGGAGGTT AGGAGCCACC CTGTGGTGGG AGAAAGGATC
GTGGAGCCGG CCGGGTTTCA TCCGCAGGTG GTTGCTGCCA TACGGCACCA CCACGAGGAC
TGGAGTGGGG GTGGCTACCC GGACGGCCTG GCCGGGGAGG AGATACCCCT CCTGGCGCGC
ATTATCAGCG CGGCTGACGC TTACGACGCC ATGACCTCCG ACAGGCCTTA CCGCCGCGCA
CGCACGGCCG AAGAAGCAAT CGAGGAGCTG CGCCGGGGAG CAGGGCGGCA GTTCGACCCG
CGTGTGGTGG ACGCGTTTCT GCGGATACCC GCTGCAGAAA TGGAAGAAAT TGGGGGGGGG
GGGGGTGCCT TGATCACCCT TCTCACCGAA GTTTTGTGCA GTTGGCAGTT TAAGGAAATG
AACCCGGTGG TGAACCCGGG CCATATCCAC GCCGGAGAAA GCAGATGGAG GTCGGAAGCA
TGA
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| Protein sequence | MGQRVVDSVN SGRRTEKTEW GLGFLERIVD SLPDGVLAVD REGRAIVWNR AAEEMTGVRK
EEVLGRGEYA YAVPFYGEPR PILVNILLGN GREWERKYEK IERKGQVLVG EGFAPYAYGG
RGLHFWTIAA PIYDEAGNLL GAVQCIRDIG ERKQMEDKLR HWSTHDALTG LYNRAFFEEE
LRRLEKGRSF PVSLILCDID DLKVVNDTLG HARGDELLRR AARVIASCVR GSDLVARVGG
DEFAAVLPQT DRAAAEEVAR RITQAAAEDN AGRPEFPLSI SVGTATAEDP GRPLVEAYKE
ADDAMYRDKL ARGAEPREAW KKADEMAFLY DFSRTVQETL EVSEVAQRAL EAVLKVTGAT
SGSVVMLSEE MPGALAAETA ATLEPGDEFR VVPAGEVVAA VERETRAVHF DSRPGAGTAA
ERRPAVAVPL MVEGKVTGVL TIAGRPEGAP FSEEEAAFLT TLGTGLGLTL QNARLYRQLQ
ARAAMLERLI ELGQALAGHL EESKVLEAAL AGVGEVLGAQ WYALCLLDEE TGELVLKASS
GMSAELQGRA ARVRPEGSLL GEVLRRGEPV AVDDTAAAGP GMQLPYYAPE MRAVAVAPVR
AGGKILGTLK VYSPVPRRWS EEEVGYLATV AGQVGLALEN ARLYASLRQY YLSTLQALAA
ALEAKDKYTR GHSVRVARLG QACARALGLS DEEREQLYLA ALLHDIGKIG IPESILLKPG
PLEPAEWEEV RSHPVVGERI VEPAGFHPQV VAAIRHHHED WSGGGYPDGL AGEEIPLLAR
IISAADAYDA MTSDRPYRRA RTAEEAIEEL RRGAGRQFDP RVVDAFLRIP AAEMEEIGGG
GGALITLLTE VLCSWQFKEM NPVVNPGHIH AGESRWRSEA
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