Gene Teth514_0032 details

Gene Information

• Locus tag: Teth514_0032
• ID: 5877934
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermoanaerobacter sp. X514
• Kingdom: Bacteria
• Replicon accession: NC_010320
• Strand: +
• Start bp: 35952
• End bp: 37850
• Gene Length: 1899 bp
• Protein Length: 632 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 641540375
• Product: putative PAS/PAC sensor protein
• Protein accession: YP_001661691
• Protein GI: 167038706
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2206] HD-GYP domain
• TIGRFAM ID: [TIGR00229] PAS domain S-box; [TIGR00277] uncharacterized domain HDIG

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0790714
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTAAAA GAAATTATAA TACACGGATA TTTTTTGTTT TATTTGGGAT TTCTGTAATT 
GTTTTCTCAT TGTCATTAGC TTATTTTTTG TCAGGGTTTG AAAATAGAGT TTTTATAGGG 
GGAATAATTT TATTAATTTC GCTGGGGTTA TCGAGTTTTT TATCTAAAAA ATTGTCTGAA 
CCTATTGAAA AATTAAACGA AGCTGTTAAA AGGATTTCTC GGGGGGATTT TGATTATCAG 
TTAAATATTA CTGATTCAAA AGAGCTTAGA GAACTTTCAG AGAATTTTAA TTCCATGGCT 
AGAGACTTAT CTCAAAGTTA TAAAAAATTA AAAGAACAAA CAGAAAGTTT AATACAACAA 
AATGAAGAAT TACAGGAGTT TAACGCGGAA TTAGAAGCTT CCTACGAGCA ATTAGAGGCT 
TTGACTCATG AATTAGAAAT TTCTGAAAGA AAGTATCGAT TGTTAGTAGA GAATATTCGG 
GATATTTTGT GGGTGACTGA TAAAAATTTT ATTATTGAAT TTGTCAATTC ACGAGTTATA 
AGGTATTTAA ATTATACTCC GCACGAATTG ATAGGAAAAA GCATTTTTGA AATTGTAGAT 
GAAGACAGCA GAGAAATCTT GAAAAACATG ATGGAAGGTA AAATTAATTT TTCAGAAATC 
AATTTTAAAA GCAAAGAAGG CTTATTGGTT ATAACAGAAA CCTATGTTAA AAGGCTAAAA 
ATTGATGAAG AAGTGGTAGG CATTCAAGGC ATTTCTCGAG ATATTACAGA AATATATTAT 
GTAAAAAAAC AGATAGCTGA AAAGAATAAT GAAATATTGG CTATTAGTGA TGTAGGAAAG 
CTACTTACAT CGGGAAGTGA CATAAAAGAG GTATTGAATA ACATAGTAGA AAAAGTTGCT 
GAATTGTTAA ATTCACCTTT GTGCACTATA AGAGAATATA ATCCGTATTT TCATAAGTTT 
GTTTTACTTG TAAAAGGGGG AGAATTAAAA GATTATCCTG TCTCTGAAGA AATTAAATTA 
TCAGAAGAGG ACATAAATGA ATTAGTAAAT CTAAAAGAAA TAAAAATAAA AGATATAGAA 
GAGTTTCCTT GTAGTGAAAA AATAACACCT ATTTTTGCAG CTAAAGATGT TTATTCAGTT 
GTGATAGTGC CTTTAATTTT TAGAAATGAA ACTAAGGGAA TTTTAACAGT TTGGACTGCA 
ACAAATACGG TCAAAAATAT GAGTTTATTG AGATCTATTG CCAGCGCAGT GTCTGTGGCA 
ATTGAAAATT CCAAACTGTA TGACGAGATT AAAAAAGTCT ATATAAAGAC TATAGAAGCT 
TTAGCTTATG CAATGGAAGC AAAGGATTTA TATACGAAAG GACATTCTAT GAGAGTATCT 
CAATATGCTG TTTTAATAGG GGAATATATG GGCTTTTCAA GGGAAAAAAT AGAACAATTA 
AGGATTGCAG GGATATTACA TGATATAGGA AAGATAGGTA TATCTGATAC TATTCTTCTA 
AAGAAAGGCA AACTCTTGGA AGAAGAGTAT AACGTTATAA AAAGTCATCC AGAGATATCA 
AAAAAAATTT TAATGCCTAT AGATCTGCCG AAAGAAATAT TAGAAGCTAT TTCCAAACAC 
CATGAACGAT ATGATGGGAA AGGTTATCCT TATGGTTTAA AAGGCGAAGA AATCCCTATA 
GAAGCAGCAA TTCTTGGTGT GGCTGATGCC TTTGACGCGA TGACTTCTGA TAGAGCTTAT 
AGAAAAGGAA TGACTATTGA AGAAGCTATT AATGAGCTTT TAAAATATAA AGGAACACAA 
TTCCATCCTG AAGTGGTAGA TGCCTTTATT TCTCTTTACA TGAATGAAAA ACACAGACTA 
GAAGAGATAA AAAATCAAGT TTTTTCAAAT GCTTCTTAA 

 

Protein sequence

MFKRNYNTRI FFVLFGISVI VFSLSLAYFL SGFENRVFIG GIILLISLGL SSFLSKKLSE 
PIEKLNEAVK RISRGDFDYQ LNITDSKELR ELSENFNSMA RDLSQSYKKL KEQTESLIQQ 
NEELQEFNAE LEASYEQLEA LTHELEISER KYRLLVENIR DILWVTDKNF IIEFVNSRVI 
RYLNYTPHEL IGKSIFEIVD EDSREILKNM MEGKINFSEI NFKSKEGLLV ITETYVKRLK 
IDEEVVGIQG ISRDITEIYY VKKQIAEKNN EILAISDVGK LLTSGSDIKE VLNNIVEKVA 
ELLNSPLCTI REYNPYFHKF VLLVKGGELK DYPVSEEIKL SEEDINELVN LKEIKIKDIE 
EFPCSEKITP IFAAKDVYSV VIVPLIFRNE TKGILTVWTA TNTVKNMSLL RSIASAVSVA 
IENSKLYDEI KKVYIKTIEA LAYAMEAKDL YTKGHSMRVS QYAVLIGEYM GFSREKIEQL 
RIAGILHDIG KIGISDTILL KKGKLLEEEY NVIKSHPEIS KKILMPIDLP KEILEAISKH 
HERYDGKGYP YGLKGEEIPI EAAILGVADA FDAMTSDRAY RKGMTIEEAI NELLKYKGTQ 
FHPEVVDAFI SLYMNEKHRL EEIKNQVFSN AS