| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3194 |
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| Symbol | |
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| ID | 7268045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 3876647 |
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| End bp | 3878869 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643568015 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002464488 |
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| Protein GI | 219850055 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.27782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.189469 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCAC ACCCATATCG GCTGTTGTTG ATTGAAGATA ATCTCTTCGA TGCCGATCTC
TTTCGGCGAG CGATACAGAA CTACGAACCG GCAATCTCGA TTACCCATCT TCATTCCTAT
CACGCAGCTT ATACTCATCT CAGCAGCTTA TCACCGCTTG CGCCGGGGTA TGACGCCGTC
ATTCTCGATC TCCATCTACG AGACGGTGAT GGGCTTGATC TGTTGTCACA CATTCGAGCC
TGTAACTTGC CGGTGGCGGT AATTATCCTG ACCGGTGGTG GCGGCGAGCA GATGGTCATC
AGCGCCTTGA AAGCCGGTGC TGATGATTAT GTCACCAAAC GTGGTGATTA CCTCGACCGG
ATCGGGCCAG TTATTGATCA AGCTTGTCGG CGTTTTCACT CACAACAAAT CCGCCGCAAT
CAGCCCATTA CCGTCTCGTA CATCGAGATT GACACCACCG ATTGTGCCAG AACGATCCAT
TTTTTGCAAC GTACTGCACC GCATATTCAC TGTATCCCGA TCCGTGGCGG GATCAACTTC
CTCAACCTGA TCGACCGCCG GCAATCGATT GGTGATGTGA TTGTCATTGA TTGTGACAAA
CCTCGACTGG CAATGCTCGA TCTGGTGAAA GAACTGATTC AGTTTCGTCG GCTCACTCAA
CCGATCATTG TGATGGCCCA ACTGAGCAAT GAAGAGTTTC CGTTGCAAGC GTTACGGCTC
GGCGTGAGTG ACTACATTAT CAAACACGAA TCGTTTCTGA GCCAGGTGCC GATTGCGCTT
GAAAATGCGT ATTATCGAGC ACAACTACAT CACCAACACG ACCAACTACG CTTGCAGGCA
CAGGCGATTA ACAATGCTGC CAACGCTATT GTCATTACGA ATCGCGACGG GGTTATCGAA
TGGGTGAATC CAGCCTTCAC CACTCTAACC GGTTACACTG CCGCTGAAGC CATCGGCCAA
TCAACCCGTA TCCTTCGCTC GGGGAAGCAC GATCAAACCT TTTATGCTGC ACTCTGGTCA
CACATTCTTG GTGGTCAGCC ATGGCGAGGC CGGTTGATCA ATCGGCGTAA AGATGGCAGT
CTCTACCACG AAGAGATGAC GATCACGCCA TTCACCGATG AAACCGGTGT GATCCATCGC
TTTATTGCGA TTAAGCAAGA TGTTACCGAG CAGGTAGTGC ATGAACAACG ACGGGCCACA
TTGGCAAGCG TTGGTGCGGC CATTCGTCCG GCACAATCGT GGGCCGAATT GACACCGATC
TTGCTCGAAC AAGTACAGGA GGTGTTGCAG GCAAGTAGTG TAGCCCTCTT GCGGACGGAT
AACGCACGAT TTCTTGTAGA TTGCACACGA GGATGGCTTG AGGTACTTTC GCATCAACCA
GAGATACTGG CGGTGCTAAG CGAGACGCCG ATTGGCACCG GATGGGTGCA TGTGACCGCG
CTGCAGCATA TCCACGACCA TACGGTAATC GGAATCTCAC TCAATACTGC CAACCGACAG
GTAGGGGTTC TCTTGCTGGC ACGGGCTACC CCACTCAGCG AAGCGGAACA TGAACTCCTC
AATGACATCG CTGAACTTGC GGCCAATGCC CTGCATCGTA CCGACCTATT CGAGCAACTG
CGCACGGCCA ATGCCGAACT ACGAGCCGCC TACGACACAA CGATTGAGGG CTGGTCACGC
GCACTCGATC TACGTGATCG GGAAACGGAA GGTCATTCCC GCCGTGTAAC CGAGCTAACG
GTCCAGATCG CAGCCCGGAT GGGGTTTCGT GATGAAGAGC TGGTTCATAT CCGACGAGGC
GCCCTCCTGC ACGACATCGG CAAAATGGGG ATTCCCGATG CAATTCTCCT CAAAGCCGGT
CCGCTCAACG ATGAAGAGTG GGCGATTATG CGCACCCACC CTACGCTTGC GGTGGAATTA
CTCCGTCCGA TAGAATTTCT CGCTCCGGCA CTCGATATTC CGTGGTGCCA TCATGAAAAA
TGGGATGGCA CCGGCTATCC ACGAGGGCTA CGTGGCGAAG AGATTCCATT AGCAGCCCGT
ATTTTTGCTG TCGTAGACGT GTACGATGCA CTGACCAGCG ACCGCCCTTA CCGAGCAGCC
TGGTCACGCG AACGGGCATT GGCGTATATC CGTGAACAAG CCGGACGACA CTTTGATCCG
CACGTCGTAG CAATCTTCGA GCAGGTCATC GCCGAAATGG AGAGCAATGC TATAATGGAG
TGA
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| Protein sequence | MASHPYRLLL IEDNLFDADL FRRAIQNYEP AISITHLHSY HAAYTHLSSL SPLAPGYDAV
ILDLHLRDGD GLDLLSHIRA CNLPVAVIIL TGGGGEQMVI SALKAGADDY VTKRGDYLDR
IGPVIDQACR RFHSQQIRRN QPITVSYIEI DTTDCARTIH FLQRTAPHIH CIPIRGGINF
LNLIDRRQSI GDVIVIDCDK PRLAMLDLVK ELIQFRRLTQ PIIVMAQLSN EEFPLQALRL
GVSDYIIKHE SFLSQVPIAL ENAYYRAQLH HQHDQLRLQA QAINNAANAI VITNRDGVIE
WVNPAFTTLT GYTAAEAIGQ STRILRSGKH DQTFYAALWS HILGGQPWRG RLINRRKDGS
LYHEEMTITP FTDETGVIHR FIAIKQDVTE QVVHEQRRAT LASVGAAIRP AQSWAELTPI
LLEQVQEVLQ ASSVALLRTD NARFLVDCTR GWLEVLSHQP EILAVLSETP IGTGWVHVTA
LQHIHDHTVI GISLNTANRQ VGVLLLARAT PLSEAEHELL NDIAELAANA LHRTDLFEQL
RTANAELRAA YDTTIEGWSR ALDLRDRETE GHSRRVTELT VQIAARMGFR DEELVHIRRG
ALLHDIGKMG IPDAILLKAG PLNDEEWAIM RTHPTLAVEL LRPIEFLAPA LDIPWCHHEK
WDGTGYPRGL RGEEIPLAAR IFAVVDVYDA LTSDRPYRAA WSRERALAYI REQAGRHFDP
HVVAIFEQVI AEMESNAIME
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