| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1321 |
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| Symbol | |
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| ID | 4281901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 1526671 |
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| End bp | 1529217 |
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| Gene Length | 2547 bp |
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| Protein Length | 848 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638138202 |
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| Product | HD-GYP domain-containing protein |
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| Protein accession | YP_754000 |
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| Protein GI | 114566846 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00277] uncharacterized domain HDIG |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTTTACTG CCTTACAAGG ACATATTTCA TTATCTTTTG AATCCTGTAT TTTGGATGCC
AAGAAAATCC CTAGACTTCA TCGACTGAAT ATATCAGTGC CGGTTGATGG GAAAAAAGAT
GAAGATGAAG TTCTTATACT CCTGGAAGAT CTTAGTGAAA GAAGGCAGAT GGAAGAAGCC
TTCGTAGATT CAGAACACCG CCTGGCCCTC ATAATTGATT TTCTGCCTGA TGCTACCCTG
GCCATTGATT GTAATGGCCG GGTAATAACC TGGAACCGGG CCGCTGAAGA AATGACTGGA
GTCAGAGCCA GAGAAATTAT CGGAAAAGGA AATTATGAAT ACGCTTTGCC TTTTTATGGT
TATCGCCGTC CGCTTTTGCT GGATCAGGTG CTGTCAGCCA GTGCTGAGTG GCAGCAAAGT
TATACCGTAT TGGAGAAAAA GGATCGTATC CTGAGTGTGG AGAACTTTTA TCCCGCTGTT
GGGGAGAGTG GAGCCTATCT CCGGTCTACG GCAGCGCCTT TACTGGATGC CGATGGAAAA
CTTATCGGTG CCATAGAATC GATTCAGAAT GTGACTCAGA AAAAACGGGC CGAAGAGATT
ACGGCTATAC AGCGGGATCT GGGTATTTCT ATGATAGCAG TTAATGGAAT GGAAGAAGCT
TTGTCCATTT GTCTAAACTC GGCATTAAAA ATCAGCGGAA TGCATGCTGG AGCCATATTT
CTGGTGGACA AAGGAGGCGA CAAGTTGACC TTATCGGTGC ACAGAGGTCT TTCTCCGGGA
TTTGTTGAAC AAGTCAAGAC TTGCGCTTTT AATACTGAAT CTTCTCTATA TACCCAGGCT
TTATATTCCT CAGCAGATGA ACTGACTGCA TATTTTGGCG ATATTATTCT CCAGGAAGGC
TTAAAAAGTA TGGCGATTAT ACCCATATAT CATAAAGATA AGATGCTTGC TTCTTTGAAG
CTTTCTTCCC GGATAATTAG TATGGTTCCA GAGCATAGCC GTCAGGCCAT AGAGAATGTG
GCTAATTATA TAGGAACTAT AATAGCTCGA CTGCAGGTGG AAGAAGAGTT GCGGGAGAGC
GAGGAGAGGT ATCGGCAATT GGTGGAGGTG TCTCCTGATG CTATTGCGGT TCATATCAAT
GGTCGGATAG TTTTCATCAA CCATGCCGGT GCCCGGTTGC TGGGTGCAGA AAAAGTTGAG
GGCATTCTGG GTAGAAGGAT AATAGAGTTT ATACATCCGG AAAGTCGCCA GGTTTATATT
GATTTGATGG AACCATTGGC TGCTAATGGA GTATTCCCCT TAACGGAAAT GAAAATAATC
TTGATTAACG GTAGAATAAT TTATGCAGAA GTTACTGGTG CTGCTCTGGT ATTTGAGGGA
ACGCCTGCTG TGCAAGTCAT TGTGCGTGAT ATTACAGTGC GTAAAAAAGC ACAATATGAC
CTTTCTCGGG AAGTATACAA ACTTCGGGTA CTATATGATC TGGCTGTGGC TATGTCATCC
AGTCAAAGCA TGGACGAAAC CCTGAAGCTC ACCGCAGACA AGAGCAGGGA GCTTTTCGCG
GCTGATTGTA TCTTTATATT CTTGATGGAT GAAAATAAAA GTGAAGCATT TCCTCATACC
CTGTCCGGCA ATAAATTGAC AGAATGGCTA GAAGTCAGGA TACCATATGG AAAAGGCCTG
ATTGGTATGG TTGCCGCCAG TGAAAGTGGA TATATCATAG AAGATTATAT CACTAGTCCT
CTTTTTACCC ACATTTTTGA CGATCTGGTG CTGGAAGAGG GCCTGATTTG TGGTTTGGCG
GCTCCTATTA TAATCGGAAA TGATTGCCTG GGAGTATTGG TGGTAGGCCA TAGAAAACGA
ACTGTGTTAA CCGAAGCCAA TCTGGACACC CTTACCTTGA TTGCTAATCT GCTAGCAGTG
GAGATTACCC GCGATCGGGC TGAAGAAAGC CTGCAAAAGA GTTTGGAACA TTTAAGAACA
GTGTTTGAAT GTACAGTCAA CGCTCTTTCC ATAACTGCAG AGAAGAAGGA TCCCTATACT
GCAGGGCACC AGCGCAGGGT AGCTTCCCTG GCCTGTGCTA TTGCCCAGGA AATGAAACTT
CCCCAATACT ATATTGATAA TGTCAGGACC GCTTCTATTT TACATGACAT TGGCAAGCTA
CAGATACCTA CTGATATACT TACCAAACCC GGAGGCTTGA CGGAAATAGA AAGATTATTG
GTAAAAACCC ATCCCCAGGC AGGATACGAG ATTGTTAAAA CTATTCCCTT TGCCCAGGCA
ATATCCACTG CTTTATTGCA ACATCATGAG CGAATGGATG GCTCTGGCTA CCCCCGGGGC
TTATCCGGCG AGGAGATTCT TTTGGAAGCA AGAATACTGG CTGTAGCTGA TGTGGTGGAA
GCCATGGCGT CCCACCGGCC TTATCGGCCT GCATTGGGAA TTGAATCAGC CCTGGAGGAG
ATAAGATGCG GAGCTGGAAC AATATATGAT GCAGAGGTAG TGGAAGCTTG CTTGAAGGTT
TTTTCTAGTA ATAATTTTAC TTTTTAA
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| Protein sequence | MFTALQGHIS LSFESCILDA KKIPRLHRLN ISVPVDGKKD EDEVLILLED LSERRQMEEA
FVDSEHRLAL IIDFLPDATL AIDCNGRVIT WNRAAEEMTG VRAREIIGKG NYEYALPFYG
YRRPLLLDQV LSASAEWQQS YTVLEKKDRI LSVENFYPAV GESGAYLRST AAPLLDADGK
LIGAIESIQN VTQKKRAEEI TAIQRDLGIS MIAVNGMEEA LSICLNSALK ISGMHAGAIF
LVDKGGDKLT LSVHRGLSPG FVEQVKTCAF NTESSLYTQA LYSSADELTA YFGDIILQEG
LKSMAIIPIY HKDKMLASLK LSSRIISMVP EHSRQAIENV ANYIGTIIAR LQVEEELRES
EERYRQLVEV SPDAIAVHIN GRIVFINHAG ARLLGAEKVE GILGRRIIEF IHPESRQVYI
DLMEPLAANG VFPLTEMKII LINGRIIYAE VTGAALVFEG TPAVQVIVRD ITVRKKAQYD
LSREVYKLRV LYDLAVAMSS SQSMDETLKL TADKSRELFA ADCIFIFLMD ENKSEAFPHT
LSGNKLTEWL EVRIPYGKGL IGMVAASESG YIIEDYITSP LFTHIFDDLV LEEGLICGLA
APIIIGNDCL GVLVVGHRKR TVLTEANLDT LTLIANLLAV EITRDRAEES LQKSLEHLRT
VFECTVNALS ITAEKKDPYT AGHQRRVASL ACAIAQEMKL PQYYIDNVRT ASILHDIGKL
QIPTDILTKP GGLTEIERLL VKTHPQAGYE IVKTIPFAQA ISTALLQHHE RMDGSGYPRG
LSGEEILLEA RILAVADVVE AMASHRPYRP ALGIESALEE IRCGAGTIYD AEVVEACLKV
FSSNNFTF
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