| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3570 |
|---|
| Symbol | |
|---|
| ID | 5735429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 4488588 |
|---|
| End bp | 4490303 |
|---|
| Gene Length | 1716 bp |
|---|
| Protein Length | 571 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641280717 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_001546334 |
|---|
| Protein GI | 159900087 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2206] HD-GYP domain |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATCGC AGACGGTTGT GCAAAATAGT GCCTTTGAGT TGGAACAAGT GTTGGTCGTG
ATTGAGCGGG CTGATGCAAT TGCTAGCAGT ATGACCCTCG ATCCGTTGCT TGATCGCATG
CTGGCCTTGT TGATCGAGAT TGCTGGCGGT GAGGCGGGTA CGCTCTATTT GGTTGATGAC
GATGAGATCG TCTTTCAAGT TGTCCATGGC GATCCGGCGA GTCAACATTT GGTTGGCATG
CGTTTACCAA TTAATATCGG TTTGGTTGGG GCTACCATTC GCGCAGCTCA ACCATTGTGG
ATCGAAGATA TCAACGCAGA CCCACGTTGG GATCGACGGC TAGGCGAGGC CAACAGCCTG
CAATTACGCT CGCTACTGTC GTTGCCGCTG CTGCTCGAAG AACAGGTCGT TGGGGTGATT
CAGATTTTCA ATCCACAACG CTCTGAGCCG CGCTTGCTCA AACTCTTGGG CAATCGCATG
GCTGCCGAAG TCGAAAAAGC CCGCTTGTTG AAAAAAAGTC AGCAACGTGA ATCACGCTTG
AGTGCCTTAG TCGAGATTGT GGGCCATATT GGTTCGACCC TCGACCGCAC AACCTTGCTG
AATTTGATCA TCGATTATGC GCGAATTTTG CTTGATGCCG AGGCTAGTTC GCTGTTTTTG
ACCGAGCCAG AATCGGGCGA TTTGATTTTG CAGCATTCAA CTGGCCATCT GCATGAACGC
GTTCAGTCGG TGCGTTTGGC CAAAGGTCGT GGCATCGCAG GCTACGTCGC TGAAACTGGC
GAGACAATCT GCGTTGGCGA TGTCAAGCGC GATCAACGCC ACGATGGTAG TGTTGATCAG
ATGACTGGCT TTGAGACCCG TTCAATTTTG GCTGTGCCAT TGCGCACTCG GTGCATTACT
TTTGGCCGTG AACGAGCGCA ATCCGAGGAA CATCTGATTG GCTGCATCGA GGTTTTGAAT
AAACGTGATG GCCGTTTCGA TGATGATGAT AAATTGTTGT TGCAAACGTT GGCGCGGCAA
GCTGCAACTG TGCTCGAAAT TGCCGATTTG TATGCTGATG TCAACGAGCT ATTTCTCGAT
GTTATTCAAG CCTTGACAGC GGCGATTGAT GCCAAAGACC CATATACCGA AGGCCATTCC
AAGCGGGTTT CGGAATTTGC CGTGGCGATT GCTGAGGAAT TAGAGCTAGA GCCAAGTTTT
ATTCATCATC TACGCATTGG CGCGATTTTG CACGATGTTG GCAAAATTGG CATTAGCGAT
GGGGTGCTGA AGAAACCTGG GCGCTTGACC GACGATGAAT TTGGCGAGAT GAAATCGCAT
CCGGAAATTG GCGAGCGAAT TCTCGGCCAT ATTCGCATGT TGCAAACCGA GTTGCCTGTG
ATTATTCAAC ATCACGAGCG ACTTGATGGT AGCGGCTACC CCTATGGCTT AGCCAAAGGC
CAAATTTCAC TCGGCGGACG GATTGTTGCC GTGGCCGATG CCTTTGATGC GATGACCTCT
GACCGACCGT ATCGCAGAGG CTTACCAACT GAAGAAGCGT TTCGACGTTT GCGGGCTGGA
GCCGACACAG AATTTGATGC TGTCTGTGTT GAAGCGCTCT GGCAAGCATT AAATCGTGGG
CGAGTTCGCC CTCAACGTTT GCGTGATGAT ATTGGTGACC ATCGAATTAT CAACGATGCA
ACGCCATTTC GCACGCCACT AACACCATCG GCTTGA
|
|---|
| Protein sequence | MTSQTVVQNS AFELEQVLVV IERADAIASS MTLDPLLDRM LALLIEIAGG EAGTLYLVDD
DEIVFQVVHG DPASQHLVGM RLPINIGLVG ATIRAAQPLW IEDINADPRW DRRLGEANSL
QLRSLLSLPL LLEEQVVGVI QIFNPQRSEP RLLKLLGNRM AAEVEKARLL KKSQQRESRL
SALVEIVGHI GSTLDRTTLL NLIIDYARIL LDAEASSLFL TEPESGDLIL QHSTGHLHER
VQSVRLAKGR GIAGYVAETG ETICVGDVKR DQRHDGSVDQ MTGFETRSIL AVPLRTRCIT
FGRERAQSEE HLIGCIEVLN KRDGRFDDDD KLLLQTLARQ AATVLEIADL YADVNELFLD
VIQALTAAID AKDPYTEGHS KRVSEFAVAI AEELELEPSF IHHLRIGAIL HDVGKIGISD
GVLKKPGRLT DDEFGEMKSH PEIGERILGH IRMLQTELPV IIQHHERLDG SGYPYGLAKG
QISLGGRIVA VADAFDAMTS DRPYRRGLPT EEAFRRLRAG ADTEFDAVCV EALWQALNRG
RVRPQRLRDD IGDHRIINDA TPFRTPLTPS A
|
|---|
| |