| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1285 |
|---|
| Symbol | |
|---|
| ID | 4809537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 1561401 |
|---|
| End bp | 1562798 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640106708 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_001037710 |
|---|
| Protein GI | 125973800 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2206] HD-GYP domain |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAACA AATCTGTGTA CATATTGATA GTTAAGTTTT TTTTCCTGTG TGCCGTACTC
TTTTTCTCGG CAGTTGGATT TGCCCGGACT TCAGACTTCA GATTTGCCAT TATCATGGGA
TTTGCTTTAA TACTTGCATT AATTGATTAC ATGTCAAAGG TTGTTTCTAA TAAAAAGAAT
TATCAGGAAC TATTAATAAA CAACGAAAGA ATAAAAAAAA TGGAAGCTGA ACTTGACTCT
CTTCATGAAG TGTCGAAGGT CATTACGTCT ACTTTTGATG TAAAAGTAAT AATGGAACAT
ACATATAATG AACTGGTAAG AATTACCAGA TGTGAATGGT ATTATGTTTG TTTTGTTGAC
AAAGAATCTT TTGAGCCGGC GTTTAACTAT GAGTTTGGCA ATCAAGTATT GAAAGAAGCG
GGGAATATCG ATTATGAACA GTATGTGAGA AATCTTGCAA AGAGTAATCC TTTTTCGGAG
CCGCAAATTG AAACGCTTTT AAGGGAAGAA AAACGTGAAA TTATGGCAAT TTCGTTAAAT
GTTTCGGATG AATTGATAGG CGCGATTTTC ATTGGCAGTT CAAAAACAGG AGCTTTTTCG
GAAGTAAATT TAAGTTTTTT AAAGAGTCTT GCGGGTTATG TTGCCATAGG TATCAGAAAT
GCTGAAATGT TTAATAATAT ATACAGCCAG AAACAAGAAA TAGAAGCCTT GTATGAACAA
GCTGCGGCAA GCAATGAAGA GCTCAACAGT TATATCAAGG AATTGGACAA AACAAAAGAG
GAGCTTAATC AGAAAAATAT CGAACTGATG ACACTGTTTG ACAACATTCA GTATGGCTAT
CTTCAGACGG TTATGTGTCT TGCCAATTCC ATCGAGGCAA AGGATCCTTA CACAAGAGGG
CATTGCCAGA GGGTTATGGA AATATCCTGT GAACTTGCAA GGGCAATGAA ACTGTCTGAG
GAAGAAATCA AGGATTTAAG GTATGCGGCC ATACTGCATG ATATAGGGAA AATAGGTATT
TCGGCGAGTA TATTAAACAA GCAGGGAAAA TTGACGGATG AAGAATTTGA AGAAATAAAG
AAGCATCCGA TTATTGCATA TAATATTCTT AAAGATGTAG AATTTTTAAA GAATGGGTTG
AACGGTATAC TGCAGCATCA TGAACGATAT GACGGGAAAG GATATCCTTA CGGACTTAAA
GGAGAAGAAA TTTGCATTTT TGCAAGGATA ATGTGTGTGG CGGACGCTTT CGACGCCATG
ACAAGTGACA GACCGTACAG AAAGGGCATG GATATGAAAT CAGCCCTGGA GGAGATAAAA
AGATGCAGGG GAACGCAATT TGATCCCGAA ATTGCTGATT TGCTTCTGAT GATGGCAGAT
GAAGGTAGAA CTTATTGA
|
|---|
| Protein sequence | MQNKSVYILI VKFFFLCAVL FFSAVGFART SDFRFAIIMG FALILALIDY MSKVVSNKKN
YQELLINNER IKKMEAELDS LHEVSKVITS TFDVKVIMEH TYNELVRITR CEWYYVCFVD
KESFEPAFNY EFGNQVLKEA GNIDYEQYVR NLAKSNPFSE PQIETLLREE KREIMAISLN
VSDELIGAIF IGSSKTGAFS EVNLSFLKSL AGYVAIGIRN AEMFNNIYSQ KQEIEALYEQ
AAASNEELNS YIKELDKTKE ELNQKNIELM TLFDNIQYGY LQTVMCLANS IEAKDPYTRG
HCQRVMEISC ELARAMKLSE EEIKDLRYAA ILHDIGKIGI SASILNKQGK LTDEEFEEIK
KHPIIAYNIL KDVEFLKNGL NGILQHHERY DGKGYPYGLK GEEICIFARI MCVADAFDAM
TSDRPYRKGM DMKSALEEIK RCRGTQFDPE IADLLLMMAD EGRTY
|
|---|
| |