Gene DhcVS_1162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhcVS_1162 
Symbol 
ID8658090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. VS 
KingdomBacteria 
Replicon accessionNC_013552 
Strand
Start bp1070613 
End bp1073123 
Gene Length2511 bp 
Protein Length836 aa 
Translation table11 
GC content47% 
IMG OID 
ProductGGDEF domain protein 
Protein accessionYP_003330603 
Protein GI270308545 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.359678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTATCT GGGCTCTGGT ACCGCTTGTA ACCAGTATTG CATATATAGT ACTACTGGCC 
GTCGTTCTGC TTTCAAAACG GCAGCCTATC ACCAGAGTTT TCTCTGTTTT CTTAGGCGCA
GCCGCTTTCT GGAGTTTCAC CTCTTTCATG CTACATATCG ACGCCCCGCC GGAACAAACC
CTTTTCTGGC ACACCCTGCT GAATATCGCT CTGTTTACCG CCATGCTTAT GTACTACCAA
TTCATCCGCG CCTATACCAA CCGCAGAGGC AAACTTTTTC TGATAATAGG CTACCTAGCA
CTGGCGCTGG ATATTTTCTT TAACCTTACC GGGCGGCTGG TTACATCCGC TTATATAGAG
GACAATGTTG TTTACCATAC AATAACCCCT ATATTTTATG CCGTTTTTAT ATTTGCTTTA
TTATTCATTG GGGTAATTAT TTACCATCTG GTGCAGAAAT ACCGCCAGTC TACAGACCCG
GCTGAACGCA ACCGCACCCT GTACCTGGTA TTGGGATGGG TAATCGTAGT ACTCTCAAGT
TATACCAATT TAAGTAGCAA CCCCAAAATC TACGGGCTCC CTCTTGATCA TGTGGGTAAC
TTTATAAATG CGGGAATTAT TGTTTACGCC ATTACCCAAT ACCGTTTGAT TGACATCAAA
CTAATAGCCC GCAAAACCCT TACTTACGTG CTTCTGTTCT TTTCCATGAT AGCCATATAC
GCAGGTGCTT TGTTTATAGC TACGCGGATA TTCCCGGCGG AAGAAATATC CACTATTATC
CTTATGGCAA CCCTGATTGT ACTGATACTG GCTATGACAG CCCGTCCTTT AAGAGCATTT
ATCGAAAAAC GCATAGACCA GCTGTTTTAC CAGGAAACCT ATGAATCCCG TCTGGCACTT
ATGGGCTTTT CACGCAAGAT GGGCAATATT CTTAATCTGG AAGAATTGGC AAAATCACTG
CTGCCTGACT TAGCCAAATC TCTAAATGTA AATAAAACCG CTTTGCTTTT CCCGGATGTT
GCCAGCGGTG AATTTTCACT GCAATATATT CACCCCGCAG ACGAGCACCT TAAAACCCAG
TTTAAGCTGG CTTCGGATAA CCCTGTCATT GCCTGGCTGG ATAAAAACAA TGCCCAGCTC
TACCTGAATA AACTGGACAG CCTGCCTGAA CTGAAAGGTC TGTGGCAGAT AGAGAAAGAA
CAACTTCAGA AATCAGAAAT TGGGCTGCTG TACCCCATTA AAAGCCGTGA AAAGCTGATA
GGCATTATCG GACTGGGAAA TAAAAAAAGG GGAGGCATAT ACTCCACCGA AGATTTAGAT
CTGCTGATAA GTGTGGCCAA TCAGGCCGGT ATCATAATAG AAAATGCCCA GCTCTATACT
CAGGCTACTA TCCGCGCCAA TACCGATGAG CTTACCCGCC TCTACAATCA CCGCCACTTT
CATGAACGCA TAGAACAGGA AATTGCCCGC GGTTCACGCT TTGGCAACAC CTTCTCCTTG
ATACTGCTGG ACCTTGACCT GTTTAAGGTC TACAATGACG TATACGGCCA TCTGGCAGGT
GACCAACTGC TCCGCAGGCT GGGTAAAATA CTGGAAAACT CCATCCGTTC TATTGATATG
GCTTTCCGAT ACGGCGGCGA GGAATTTGCC ATTATGCTGC CCGGCACCAA GATTGAAGAC
GCTTACCATG TAGCTGAACG TATCCGCAAA AATATTGAAT CCAAATCTTC TTTCCGTGAT
ATGCCCATAA CCGCTTCTTT GGGTATGGCT AACTGGCCCA ATGACGGGGT AATGAAAGAG
GAGATTATAG CCAAAGCCGA TGCCGCTCTG TACCGTTCAA AAGAGACCGG ACGAAACCGC
ACCAGCCTTC CCGCTGACCT TAATAACAAC CCCACTCAGG TAATCAGCTC TGAGTTGGAA
GCCCGCCCCA AAGCCATGTC TATTATCTAT GCTCTGGCAG CTACAGTTGA TGCCAAAGAC
CACTATACCT ACGGGCATTC GCGCAAGGTT AGTGAATATG CAGTGGCACT AGCAGAGATA
TTAAAACTGT CTGAGGAAAA AGTGGAAAAC ATACGGGCGG CAGGCCTGTT GCATGACATT
GGTAAAATAG GTGTGCCGGA CCATATCCTG ACTAAGCCGT CTGCATTGGA TGACGAGGAA
TGGGAACCTA TCAAGACTCA CCCCGAACTG GGTGTGGAAA TATTAAAACG GATAATGGAT
TTGGTGAACT GTTTGCTGGC TATACTTCAT CACCACGAAC ACTTTGACGG CAGCGGGTAT
CCGTTTGGAC TCAAGGGAGA AAATATACCT CTGGAAGCCA GAATACTCAG CATTGCAGAC
GCCTATGATG CAGTTACCTC GCCACGCCCC TACCGTACGC AACTTCACAC TGAGCAAGCT
ATCGCCGAAC TAAAACGTTG TGCCGGCTCT CAGTTTGACC CAGAGCTGGT GGATATATTC
TGTCATGTCA TAAAACCTGA AGACCACCCC CAGCTGAAAG CCTCACCGTA A
 
Protein sequence
MTIWALVPLV TSIAYIVLLA VVLLSKRQPI TRVFSVFLGA AAFWSFTSFM LHIDAPPEQT 
LFWHTLLNIA LFTAMLMYYQ FIRAYTNRRG KLFLIIGYLA LALDIFFNLT GRLVTSAYIE
DNVVYHTITP IFYAVFIFAL LFIGVIIYHL VQKYRQSTDP AERNRTLYLV LGWVIVVLSS
YTNLSSNPKI YGLPLDHVGN FINAGIIVYA ITQYRLIDIK LIARKTLTYV LLFFSMIAIY
AGALFIATRI FPAEEISTII LMATLIVLIL AMTARPLRAF IEKRIDQLFY QETYESRLAL
MGFSRKMGNI LNLEELAKSL LPDLAKSLNV NKTALLFPDV ASGEFSLQYI HPADEHLKTQ
FKLASDNPVI AWLDKNNAQL YLNKLDSLPE LKGLWQIEKE QLQKSEIGLL YPIKSREKLI
GIIGLGNKKR GGIYSTEDLD LLISVANQAG IIIENAQLYT QATIRANTDE LTRLYNHRHF
HERIEQEIAR GSRFGNTFSL ILLDLDLFKV YNDVYGHLAG DQLLRRLGKI LENSIRSIDM
AFRYGGEEFA IMLPGTKIED AYHVAERIRK NIESKSSFRD MPITASLGMA NWPNDGVMKE
EIIAKADAAL YRSKETGRNR TSLPADLNNN PTQVISSELE ARPKAMSIIY ALAATVDAKD
HYTYGHSRKV SEYAVALAEI LKLSEEKVEN IRAAGLLHDI GKIGVPDHIL TKPSALDDEE
WEPIKTHPEL GVEILKRIMD LVNCLLAILH HHEHFDGSGY PFGLKGENIP LEARILSIAD
AYDAVTSPRP YRTQLHTEQA IAELKRCAGS QFDPELVDIF CHVIKPEDHP QLKASP