| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1162 |
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| Symbol | |
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| ID | 8658090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | + |
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| Start bp | 1070613 |
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| End bp | 1073123 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | |
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| Product | GGDEF domain protein |
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| Protein accession | YP_003330603 |
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| Protein GI | 270308545 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.359678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTATCT GGGCTCTGGT ACCGCTTGTA ACCAGTATTG CATATATAGT ACTACTGGCC
GTCGTTCTGC TTTCAAAACG GCAGCCTATC ACCAGAGTTT TCTCTGTTTT CTTAGGCGCA
GCCGCTTTCT GGAGTTTCAC CTCTTTCATG CTACATATCG ACGCCCCGCC GGAACAAACC
CTTTTCTGGC ACACCCTGCT GAATATCGCT CTGTTTACCG CCATGCTTAT GTACTACCAA
TTCATCCGCG CCTATACCAA CCGCAGAGGC AAACTTTTTC TGATAATAGG CTACCTAGCA
CTGGCGCTGG ATATTTTCTT TAACCTTACC GGGCGGCTGG TTACATCCGC TTATATAGAG
GACAATGTTG TTTACCATAC AATAACCCCT ATATTTTATG CCGTTTTTAT ATTTGCTTTA
TTATTCATTG GGGTAATTAT TTACCATCTG GTGCAGAAAT ACCGCCAGTC TACAGACCCG
GCTGAACGCA ACCGCACCCT GTACCTGGTA TTGGGATGGG TAATCGTAGT ACTCTCAAGT
TATACCAATT TAAGTAGCAA CCCCAAAATC TACGGGCTCC CTCTTGATCA TGTGGGTAAC
TTTATAAATG CGGGAATTAT TGTTTACGCC ATTACCCAAT ACCGTTTGAT TGACATCAAA
CTAATAGCCC GCAAAACCCT TACTTACGTG CTTCTGTTCT TTTCCATGAT AGCCATATAC
GCAGGTGCTT TGTTTATAGC TACGCGGATA TTCCCGGCGG AAGAAATATC CACTATTATC
CTTATGGCAA CCCTGATTGT ACTGATACTG GCTATGACAG CCCGTCCTTT AAGAGCATTT
ATCGAAAAAC GCATAGACCA GCTGTTTTAC CAGGAAACCT ATGAATCCCG TCTGGCACTT
ATGGGCTTTT CACGCAAGAT GGGCAATATT CTTAATCTGG AAGAATTGGC AAAATCACTG
CTGCCTGACT TAGCCAAATC TCTAAATGTA AATAAAACCG CTTTGCTTTT CCCGGATGTT
GCCAGCGGTG AATTTTCACT GCAATATATT CACCCCGCAG ACGAGCACCT TAAAACCCAG
TTTAAGCTGG CTTCGGATAA CCCTGTCATT GCCTGGCTGG ATAAAAACAA TGCCCAGCTC
TACCTGAATA AACTGGACAG CCTGCCTGAA CTGAAAGGTC TGTGGCAGAT AGAGAAAGAA
CAACTTCAGA AATCAGAAAT TGGGCTGCTG TACCCCATTA AAAGCCGTGA AAAGCTGATA
GGCATTATCG GACTGGGAAA TAAAAAAAGG GGAGGCATAT ACTCCACCGA AGATTTAGAT
CTGCTGATAA GTGTGGCCAA TCAGGCCGGT ATCATAATAG AAAATGCCCA GCTCTATACT
CAGGCTACTA TCCGCGCCAA TACCGATGAG CTTACCCGCC TCTACAATCA CCGCCACTTT
CATGAACGCA TAGAACAGGA AATTGCCCGC GGTTCACGCT TTGGCAACAC CTTCTCCTTG
ATACTGCTGG ACCTTGACCT GTTTAAGGTC TACAATGACG TATACGGCCA TCTGGCAGGT
GACCAACTGC TCCGCAGGCT GGGTAAAATA CTGGAAAACT CCATCCGTTC TATTGATATG
GCTTTCCGAT ACGGCGGCGA GGAATTTGCC ATTATGCTGC CCGGCACCAA GATTGAAGAC
GCTTACCATG TAGCTGAACG TATCCGCAAA AATATTGAAT CCAAATCTTC TTTCCGTGAT
ATGCCCATAA CCGCTTCTTT GGGTATGGCT AACTGGCCCA ATGACGGGGT AATGAAAGAG
GAGATTATAG CCAAAGCCGA TGCCGCTCTG TACCGTTCAA AAGAGACCGG ACGAAACCGC
ACCAGCCTTC CCGCTGACCT TAATAACAAC CCCACTCAGG TAATCAGCTC TGAGTTGGAA
GCCCGCCCCA AAGCCATGTC TATTATCTAT GCTCTGGCAG CTACAGTTGA TGCCAAAGAC
CACTATACCT ACGGGCATTC GCGCAAGGTT AGTGAATATG CAGTGGCACT AGCAGAGATA
TTAAAACTGT CTGAGGAAAA AGTGGAAAAC ATACGGGCGG CAGGCCTGTT GCATGACATT
GGTAAAATAG GTGTGCCGGA CCATATCCTG ACTAAGCCGT CTGCATTGGA TGACGAGGAA
TGGGAACCTA TCAAGACTCA CCCCGAACTG GGTGTGGAAA TATTAAAACG GATAATGGAT
TTGGTGAACT GTTTGCTGGC TATACTTCAT CACCACGAAC ACTTTGACGG CAGCGGGTAT
CCGTTTGGAC TCAAGGGAGA AAATATACCT CTGGAAGCCA GAATACTCAG CATTGCAGAC
GCCTATGATG CAGTTACCTC GCCACGCCCC TACCGTACGC AACTTCACAC TGAGCAAGCT
ATCGCCGAAC TAAAACGTTG TGCCGGCTCT CAGTTTGACC CAGAGCTGGT GGATATATTC
TGTCATGTCA TAAAACCTGA AGACCACCCC CAGCTGAAAG CCTCACCGTA A
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| Protein sequence | MTIWALVPLV TSIAYIVLLA VVLLSKRQPI TRVFSVFLGA AAFWSFTSFM LHIDAPPEQT
LFWHTLLNIA LFTAMLMYYQ FIRAYTNRRG KLFLIIGYLA LALDIFFNLT GRLVTSAYIE
DNVVYHTITP IFYAVFIFAL LFIGVIIYHL VQKYRQSTDP AERNRTLYLV LGWVIVVLSS
YTNLSSNPKI YGLPLDHVGN FINAGIIVYA ITQYRLIDIK LIARKTLTYV LLFFSMIAIY
AGALFIATRI FPAEEISTII LMATLIVLIL AMTARPLRAF IEKRIDQLFY QETYESRLAL
MGFSRKMGNI LNLEELAKSL LPDLAKSLNV NKTALLFPDV ASGEFSLQYI HPADEHLKTQ
FKLASDNPVI AWLDKNNAQL YLNKLDSLPE LKGLWQIEKE QLQKSEIGLL YPIKSREKLI
GIIGLGNKKR GGIYSTEDLD LLISVANQAG IIIENAQLYT QATIRANTDE LTRLYNHRHF
HERIEQEIAR GSRFGNTFSL ILLDLDLFKV YNDVYGHLAG DQLLRRLGKI LENSIRSIDM
AFRYGGEEFA IMLPGTKIED AYHVAERIRK NIESKSSFRD MPITASLGMA NWPNDGVMKE
EIIAKADAAL YRSKETGRNR TSLPADLNNN PTQVISSELE ARPKAMSIIY ALAATVDAKD
HYTYGHSRKV SEYAVALAEI LKLSEEKVEN IRAAGLLHDI GKIGVPDHIL TKPSALDDEE
WEPIKTHPEL GVEILKRIMD LVNCLLAILH HHEHFDGSGY PFGLKGENIP LEARILSIAD
AYDAVTSPRP YRTQLHTEQA IAELKRCAGS QFDPELVDIF CHVIKPEDHP QLKASP
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