More than 300 homologs were found in PanDaTox collection
for query gene PSPTO_0912 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_0912  methyl-accepting chemotaxis protein  100 
 
 
551 aa  1114    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0785  histidine kinase, HAMP region: chemotaxis sensory transducer  89.29 
 
 
551 aa  945    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.367078  normal 
 
 
-
 
NC_007298  Daro_1143  histidine kinase, HAMP region: chemotaxis sensory transducer  50.46 
 
 
541 aa  456  1e-127  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0902  methyl-accepting chemotaxis sensory transducer  54.2 
 
 
550 aa  444  1e-123  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0683  methyl-accepting chemotaxis protein, putative  47.98 
 
 
568 aa  418  9.999999999999999e-116  Geobacter sulfurreducens PCA  Bacteria  normal  0.268569  n/a   
 
 
-
 
NC_009439  Pmen_1567  methyl-accepting chemotaxis sensory transducer  46.19 
 
 
547 aa  416  9.999999999999999e-116  Pseudomonas mendocina ymp  Bacteria  normal  0.0467505  normal 
 
 
-
 
NC_013173  Dbac_2647  methyl-accepting chemotaxis sensory transducer  42.55 
 
 
554 aa  411  1e-113  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.910941  n/a   
 
 
-
 
NC_007954  Sden_3297  chemotaxis sensory transducer  46.84 
 
 
543 aa  408  1.0000000000000001e-112  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1318  methyl-accepting chemotaxis sensory transducer  51.63 
 
 
555 aa  397  1e-109  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2779  methyl-accepting chemotaxis sensory transducer  45.05 
 
 
566 aa  369  1e-101  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2985  methyl-accepting chemotaxis sensory transducer  42.68 
 
 
576 aa  358  9.999999999999999e-98  Geobacter uraniireducens Rf4  Bacteria  normal  0.293775  n/a   
 
 
-
 
NC_011891  A2cp1_2573  methyl-accepting chemotaxis sensory transducer  41.42 
 
 
621 aa  358  1.9999999999999998e-97  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.650368  n/a   
 
 
-
 
NC_011145  AnaeK_2477  methyl-accepting chemotaxis sensory transducer  41.18 
 
 
617 aa  357  2.9999999999999997e-97  Anaeromyxobacter sp. K  Bacteria  normal  0.200364  n/a   
 
 
-
 
NC_010524  Lcho_3799  methyl-accepting chemotaxis sensory transducer  60.17 
 
 
772 aa  356  5e-97  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU1298  methyl-accepting chemotaxis protein  45.45 
 
 
568 aa  355  1e-96  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1608  methyl-accepting chemotaxis sensory transducer  41.53 
 
 
558 aa  354  2e-96  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1105  methyl-accepting chemotaxis sensory transducer  41.06 
 
 
563 aa  350  3e-95  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_1917  methyl-accepting chemotaxis sensory transducer  47.2 
 
 
677 aa  346  5e-94  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.134066  n/a   
 
 
-
 
NC_007760  Adeh_1380  methyl-accepting chemotaxis sensory transducer  39.96 
 
 
608 aa  342  1e-92  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.236828  n/a   
 
 
-
 
NC_010524  Lcho_0333  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  65.47 
 
 
720 aa  342  1e-92  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011145  AnaeK_1691  methyl-accepting chemotaxis sensory transducer  39.13 
 
 
553 aa  338  1.9999999999999998e-91  Anaeromyxobacter sp. K  Bacteria  normal  0.302444  n/a   
 
 
-
 
NC_013173  Dbac_1421  methyl-accepting chemotaxis sensory transducer  52.92 
 
 
676 aa  337  3.9999999999999995e-91  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.45919  n/a   
 
 
-
 
NC_011145  AnaeK_3761  methyl-accepting chemotaxis sensory transducer  42.09 
 
 
557 aa  336  5e-91  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1160  methyl-accepting chemotaxis sensory transducer  45.91 
 
 
532 aa  337  5e-91  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1762  methyl-accepting chemotaxis sensory transducer  39.13 
 
 
553 aa  336  5.999999999999999e-91  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3844  methyl-accepting chemotaxis sensory transducer  45.9 
 
 
556 aa  335  1e-90  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2424  methyl-accepting chemotaxis sensory transducer  42.27 
 
 
581 aa  334  2e-90  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_2187  methyl-accepting chemotaxis sensory transducer  40.75 
 
 
553 aa  333  6e-90  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2323  methyl-accepting chemotaxis protein  53.3 
 
 
646 aa  330  5.0000000000000004e-89  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007760  Adeh_3704  methyl-accepting chemotaxis sensory transducer  41.99 
 
 
559 aa  330  5.0000000000000004e-89  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.183593  n/a   
 
 
-
 
NC_011145  AnaeK_1220  methyl-accepting chemotaxis sensory transducer  49.15 
 
 
538 aa  329  9e-89  Anaeromyxobacter sp. K  Bacteria  normal  0.307637  n/a   
 
 
-
 
NC_011891  A2cp1_4039  methyl-accepting chemotaxis sensory transducer  58.47 
 
 
551 aa  329  9e-89  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3998  methyl-accepting chemotaxis sensory transducer  59.72 
 
 
550 aa  328  1.0000000000000001e-88  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3897  methyl-accepting chemotaxis sensory transducer  56.37 
 
 
551 aa  328  2.0000000000000001e-88  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.198365  n/a   
 
 
-
 
NC_010524  Lcho_1531  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  60.31 
 
 
1019 aa  328  2.0000000000000001e-88  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.301691 
 
 
-
 
NC_002939  GSU1300  methyl-accepting chemotaxis protein  47.25 
 
 
563 aa  327  3e-88  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0172  methyl-accepting chemotaxis sensory transducer  40 
 
 
550 aa  327  4.0000000000000003e-88  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_2542  methyl-accepting chemotaxis sensory transducer  56.07 
 
 
597 aa  323  6e-87  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  38.21 
 
 
650 aa  322  1.9999999999999998e-86  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_011891  A2cp1_1322  methyl-accepting chemotaxis sensory transducer  45.95 
 
 
538 aa  320  3e-86  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0950  methyl-accepting chemotaxis sensory transducer  42.07 
 
 
546 aa  320  6e-86  Geobacter sp. M21  Bacteria  n/a    normal  0.187483 
 
 
-
 
NC_002939  GSU1304  methyl-accepting chemotaxis protein  42.13 
 
 
566 aa  319  7e-86  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3297  methyl-accepting chemotaxis sensory transducer  41.19 
 
 
548 aa  319  7.999999999999999e-86  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3671  methyl-accepting chemotaxis sensory transducer  50.53 
 
 
509 aa  318  2e-85  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.353813  n/a   
 
 
-
 
NC_010717  PXO_04751  chemotaxis protein  70.61 
 
 
698 aa  318  2e-85  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3837  methyl-accepting chemotaxis sensory transducer  53.27 
 
 
561 aa  318  2e-85  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.834659 
 
 
-
 
NC_010524  Lcho_1530  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  68.95 
 
 
890 aa  316  8e-85  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.155082 
 
 
-
 
NC_007519  Dde_1077  methyl-accepting chemotaxis sensory transducer  50.97 
 
 
690 aa  313  5.999999999999999e-84  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.317064  n/a   
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  36.78 
 
 
575 aa  307  3e-82  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_008576  Mmc1_2401  methyl-accepting chemotaxis sensory transducer  52.41 
 
 
674 aa  306  7e-82  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.0000495749  normal  0.0928318 
 
 
-
 
NC_002939  GSU1303  methyl-accepting chemotaxis protein  51.82 
 
 
494 aa  306  9.000000000000001e-82  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0949  methyl-accepting chemotaxis sensory transducer  56.48 
 
 
554 aa  305  1.0000000000000001e-81  Geobacter sp. M21  Bacteria  n/a    normal  0.0219131 
 
 
-
 
NC_008751  Dvul_2361  methyl-accepting chemotaxis sensory transducer  53.54 
 
 
652 aa  305  1.0000000000000001e-81  Desulfovibrio vulgaris DP4  Bacteria  normal  0.128072  normal  0.188082 
 
 
-
 
NC_011145  AnaeK_3602  methyl-accepting chemotaxis sensory transducer  56.7 
 
 
509 aa  303  4.0000000000000003e-81  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1209  methyl-accepting chemotaxis sensory transducer  44.4 
 
 
659 aa  303  5.000000000000001e-81  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.261932 
 
 
-
 
NC_010338  Caul_0614  methyl-accepting chemotaxis sensory transducer  38.54 
 
 
560 aa  303  5.000000000000001e-81  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_3513  methyl-accepting chemotaxis sensory transducer  56.08 
 
 
509 aa  301  2e-80  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.150611  n/a   
 
 
-
 
NC_011145  AnaeK_2401  methyl-accepting chemotaxis sensory transducer  44.13 
 
 
528 aa  301  2e-80  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_0628  methyl-accepting chemotaxis sensory transducer  49.22 
 
 
675 aa  300  4e-80  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3308  methyl-accepting chemotaxis sensory transducer  41.94 
 
 
682 aa  300  5e-80  Magnetococcus sp. MC-1  Bacteria  normal  0.785168  normal 
 
 
-
 
NC_008609  Ppro_1601  methyl-accepting chemotaxis sensory transducer  51.15 
 
 
1500 aa  300  5e-80  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1401  chemotaxis sensory transducer  38.5 
 
 
569 aa  298  2e-79  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1391  methyl-accepting chemotaxis sensory transducer  32.97 
 
 
557 aa  298  2e-79  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2710  methyl-accepting chemotaxis sensory transducer  52.48 
 
 
969 aa  298  2e-79  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010510  Mrad2831_5777  methyl-accepting chemotaxis sensory transducer  50.47 
 
 
705 aa  297  3e-79  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.807181  normal  0.137814 
 
 
-
 
NC_009675  Anae109_2874  methyl-accepting chemotaxis sensory transducer  51.15 
 
 
563 aa  297  3e-79  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.872696  normal  0.485865 
 
 
-
 
NC_009429  Rsph17025_3891  hypothetical protein  35.09 
 
 
551 aa  291  2e-77  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.452082 
 
 
-
 
NC_011146  Gbem_3298  methyl-accepting chemotaxis sensory transducer  45.35 
 
 
553 aa  291  2e-77  Geobacter bemidjiensis Bem  Bacteria  normal  0.62981  n/a   
 
 
-
 
NC_009050  Rsph17029_3810  methyl-accepting chemotaxis sensory transducer  35.62 
 
 
561 aa  291  2e-77  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.296432 
 
 
-
 
NC_007494  RSP_3083  methyl accepting chemotaxis protein  35.33 
 
 
561 aa  289  1e-76  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.481742  n/a   
 
 
-
 
NC_011146  Gbem_2944  methyl-accepting chemotaxis sensory transducer  53.57 
 
 
780 aa  287  4e-76  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1294  methyl-accepting chemotaxis sensory transducer  54.31 
 
 
686 aa  286  5e-76  Geobacter sp. M21  Bacteria  n/a    hitchhiker  4.66893e-19 
 
 
-
 
NC_009943  Dole_2000  methyl-accepting chemotaxis sensory transducer  49.86 
 
 
559 aa  286  7e-76  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.25845  n/a   
 
 
-
 
NC_009429  Rsph17025_3251  hypothetical protein  37.39 
 
 
552 aa  285  1.0000000000000001e-75  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.367816  normal  0.217501 
 
 
-
 
NC_010814  Glov_1735  methyl-accepting chemotaxis sensory transducer  51.35 
 
 
868 aa  284  2.0000000000000002e-75  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2945  methyl-accepting chemotaxis sensory transducer  53.41 
 
 
780 aa  283  6.000000000000001e-75  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_2442  methyl accepting chemotaxis protein, McpB  34.47 
 
 
560 aa  282  9e-75  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.648609  n/a   
 
 
-
 
NC_007643  Rru_A1404  chemotaxis sensory transducer  36.39 
 
 
611 aa  282  9e-75  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.011031  n/a   
 
 
-
 
NC_010627  Bphy_7569  methyl-accepting chemotaxis sensory transducer  35.74 
 
 
576 aa  282  9e-75  Burkholderia phymatum STM815  Bacteria  normal  0.448898  normal  0.153923 
 
 
-
 
NC_009049  Rsph17029_1106  methyl-accepting chemotaxis sensory transducer  34.47 
 
 
560 aa  282  9e-75  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.809659 
 
 
-
 
NC_012918  GM21_1280  methyl-accepting chemotaxis sensory transducer  53.78 
 
 
1048 aa  281  2e-74  Geobacter sp. M21  Bacteria  n/a    normal  0.0818053 
 
 
-
 
NC_011369  Rleg2_3262  methyl-accepting chemotaxis sensory transducer  36.65 
 
 
569 aa  281  2e-74  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.846629 
 
 
-
 
NC_011769  DvMF_0621  methyl-accepting chemotaxis sensory transducer  51.95 
 
 
727 aa  281  2e-74  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0173671 
 
 
-
 
NC_011146  Gbem_2942  methyl-accepting chemotaxis sensory transducer  52.87 
 
 
1049 aa  281  2e-74  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  34.8 
 
 
559 aa  281  2e-74  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2489  methyl-accepting chemotaxis sensory transducer  44 
 
 
529 aa  280  7e-74  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1532  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  54.84 
 
 
853 aa  278  2e-73  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.103077 
 
 
-
 
NC_012850  Rleg_3561  methyl-accepting chemotaxis sensory transducer  36.81 
 
 
569 aa  278  2e-73  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.216373 
 
 
-
 
NC_007925  RPC_4671  methyl-accepting chemotaxis sensory transducer  40.09 
 
 
691 aa  277  3e-73  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_3443  methyl-accepting chemotaxis sensory transducer  38.03 
 
 
553 aa  277  3e-73  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0628443 
 
 
-
 
NC_008751  Dvul_1207  methyl-accepting chemotaxis sensory transducer  51.55 
 
 
720 aa  277  3e-73  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.149931 
 
 
-
 
NC_007494  RSP_3708  methyl accepting chemotaxis protein  37.83 
 
 
553 aa  276  5e-73  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2422  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.93 
 
 
1046 aa  276  6e-73  Geobacter metallireducens GS-15  Bacteria  normal  0.925436  normal 
 
 
-
 
NC_011989  Avi_4314  methyl-accepting chemotaxis protein  35.32 
 
 
564 aa  276  8e-73  Agrobacterium vitis S4  Bacteria  normal  0.77703  n/a   
 
 
-
 
NC_010814  Glov_1733  methyl-accepting chemotaxis sensory transducer  57.19 
 
 
823 aa  276  8e-73  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  35.75 
 
 
578 aa  276  8e-73  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_002939  GSU1294  methyl-accepting chemotaxis protein  59.71 
 
 
962 aa  275  1.0000000000000001e-72  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2772  methyl-accepting chemotaxis sensory transducer  51.49 
 
 
735 aa  275  1.0000000000000001e-72  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_2989  methyl-accepting chemotaxis sensory transducer  52.66 
 
 
1093 aa  275  2.0000000000000002e-72  Geobacter uraniireducens Rf4  Bacteria  normal  0.653084  n/a   
 
 
-
 
NC_011146  Gbem_1482  methyl-accepting chemotaxis sensory transducer  51.34 
 
 
735 aa  273  5.000000000000001e-72  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
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