More than 300 homologs were found in PanDaTox collection
for query gene Mmc1_0134 on replicon NC_008576
Organism: Magnetococcus sp. MC-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012912  Dd1591_0929  type I site-specific deoxyribonuclease, HsdR family  68.02 
 
 
990 aa  1429    Dickeya zeae Ech1591  Bacteria  normal  0.379173  n/a   
 
 
-
 
NC_008786  Veis_3553  HsdR family type I site-specific deoxyribonuclease  68.98 
 
 
984 aa  1427    Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_0448  Type I site-specific deoxyribonuclease HsdR  75.53 
 
 
872 aa  1336    Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0363122  n/a   
 
 
-
 
NC_011061  Paes_2398  type I site-specific deoxyribonuclease, HsdR family  76.43 
 
 
1015 aa  1637    Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.632036  n/a   
 
 
-
 
NC_011060  Ppha_0743  type I site-specific deoxyribonuclease, HsdR family  67.06 
 
 
999 aa  1407    Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.575824  n/a   
 
 
-
 
NC_010682  Rpic_0447  type I site-specific deoxyribonuclease, HsdR family  68.12 
 
 
989 aa  1439    Ralstonia pickettii 12J  Bacteria  normal  0.926177  hitchhiker  0.0000000581329 
 
 
-
 
NC_011761  AFE_2381  type I restriction-modification system, R subunit  66.27 
 
 
1032 aa  1393    Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1215  HsdR family type I site-specific deoxyribonuclease  67.52 
 
 
990 aa  1408    Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_1088  HsdR family type I site-specific deoxyribonuclease  61.37 
 
 
1025 aa  1273    Opitutus terrae PB90-1  Bacteria  normal  0.0870888  normal 
 
 
-
 
NC_011206  Lferr_2012  type I site-specific deoxyribonuclease, HsdR family  66.27 
 
 
1032 aa  1393    Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3719  HsdR family type I site-specific deoxyribonuclease  65.83 
 
 
1023 aa  1390    Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_0134  HsdR family type I site-specific deoxyribonuclease  100 
 
 
1015 aa  2105    Magnetococcus sp. MC-1  Bacteria  normal  normal  0.363012 
 
 
-
 
NC_007498  Pcar_0897  HsdR-like, putative type I restriction deoxyribonuclease  37.22 
 
 
1294 aa  536  1e-151  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_1841  HsdR family type I site-specific deoxyribonuclease  36.15 
 
 
953 aa  535  1e-150  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_013037  Dfer_5242  type I site-specific deoxyribonuclease, HsdR family  36.52 
 
 
974 aa  520  1e-146  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_002976  SERP2474  type I restriction-modification system, R subunit  35.33 
 
 
930 aa  496  9.999999999999999e-139  Staphylococcus epidermidis RP62A  Bacteria  normal  0.081777  n/a   
 
 
-
 
NC_009632  SaurJH1_0185  HsdR family type I site-specific deoxyribonuclease  33.1 
 
 
929 aa  493  9.999999999999999e-139  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0180  HsdR family type I site-specific deoxyribonuclease  33.1 
 
 
929 aa  493  9.999999999999999e-139  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.634319  n/a   
 
 
-
 
NC_008255  CHU_3349  type I restriction-modification system R subunit  34.62 
 
 
963 aa  495  9.999999999999999e-139  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.531995  normal  0.015033 
 
 
-
 
NC_013522  Taci_1543  type I site-specific deoxyribonuclease, HsdR family  32.03 
 
 
1033 aa  440  9.999999999999999e-123  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_2179  HsdR family type I site-specific deoxyribonuclease  33.67 
 
 
1007 aa  434  1e-120  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0502  type I site-specific deoxyribonuclease, HsdR family  33.13 
 
 
1015 aa  434  1e-120  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.840857 
 
 
-
 
NC_008786  Veis_2424  HsdR family type I site-specific deoxyribonuclease  34.06 
 
 
1016 aa  430  1e-119  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.831432  normal 
 
 
-
 
NC_010513  Xfasm12_2271  type I restriction-modification system endonuclease  33.13 
 
 
1009 aa  426  1e-118  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1107  HsdR family type I site-specific deoxyribonuclease  32.33 
 
 
1013 aa  428  1e-118  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_1853  type I restriction enzyme EcoR124II R protein  32.17 
 
 
989 aa  424  1e-117  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1501  type I site-specific deoxyribonuclease, HsdR family  33.4 
 
 
1034 aa  420  1e-116  Jonesia denitrificans DSM 20603  Bacteria  normal  0.573056  normal  0.735582 
 
 
-
 
NC_009802  CCC13826_1410  type I restriction enzyme EcoR124II R protein (R.EcoR124II)  33.47 
 
 
1031 aa  422  1e-116  Campylobacter concisus 13826  Bacteria  normal  0.643236  n/a   
 
 
-
 
NC_009634  Mevan_0082  HsdR family type I site-specific deoxyribonuclease  32.1 
 
 
1014 aa  405  1e-111  Methanococcus vannielii SB  Archaea  normal  0.0348133  n/a   
 
 
-
 
NC_011663  Sbal223_3473  type I site-specific deoxyribonuclease, HsdR family  36.48 
 
 
1037 aa  394  1e-108  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1956  type I site-specific deoxyribonuclease, HsdR family protein  36.48 
 
 
1037 aa  395  1e-108  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.160894  n/a   
 
 
-
 
NC_009052  Sbal_0775  HsdR family type I site-specific deoxyribonuclease  32.12 
 
 
1041 aa  392  1e-107  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3053  HsdR family type I site-specific deoxyribonuclease  34.55 
 
 
1038 aa  392  1e-107  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_4396  HsdR family type I site-specific deoxyribonuclease  33.3 
 
 
1038 aa  373  1e-102  Flavobacterium johnsoniae UW101  Bacteria  normal  0.806316  n/a   
 
 
-
 
NC_008532  STER_0747  type I restriction-modification system restriction subunit  30.34 
 
 
996 aa  335  3e-90  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01119  type I restriction enzyme, R subunit  29.85 
 
 
1174 aa  327  5e-88  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010465  YPK_3674  HsdR family type I site-specific deoxyribonuclease  27.87 
 
 
1075 aa  310  9e-83  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2726  type I site-specific deoxyribonuclease, HsdR family  32.47 
 
 
1041 aa  309  2.0000000000000002e-82  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_3538  HsdR family type I site-specific deoxyribonuclease  28.29 
 
 
1082 aa  308  4.0000000000000004e-82  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0228194  n/a   
 
 
-
 
NC_009832  Spro_4084  HsdR family type I site-specific deoxyribonuclease  28.09 
 
 
1061 aa  304  4.0000000000000003e-81  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_008573  Shewana3_4164  HsdR family type I site-specific deoxyribonuclease  28.68 
 
 
1076 aa  303  9e-81  Shewanella sp. ANA-3  Bacteria  normal  normal  0.0160364 
 
 
-
 
NC_009036  Sbal_4384  HsdR family type I site-specific deoxyribonuclease  30.08 
 
 
1061 aa  303  1e-80  Shewanella baltica OS155  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_3955  type I site-specific deoxyribonuclease, HsdR family  32.79 
 
 
1042 aa  296  1e-78  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_03160  type I site-specific deoxyribonuclease, HsdR family  30.61 
 
 
1077 aa  291  4e-77  Cryptobacterium curtum DSM 15641  Bacteria  normal  hitchhiker  0.00000000000937778 
 
 
-
 
NC_010816  BLD_1962  type I site-specific restriction-modification system R subunit  31.23 
 
 
1095 aa  291  6e-77  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_010655  Amuc_1913  type I site-specific deoxyribonuclease, HsdR family  30.76 
 
 
1039 aa  290  1e-76  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal  0.0328667 
 
 
-
 
NC_010465  YPK_3666  Type I site-specific deoxyribonuclease  27.77 
 
 
881 aa  268  4e-70  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.616224  n/a   
 
 
-
 
NC_008309  HS_0559  type I site-specific deoxyribonuclease, restriction subunit  28.51 
 
 
1066 aa  268  5e-70  Haemophilus somnus 129PT  Bacteria  normal  0.193671  n/a   
 
 
-
 
NC_007484  Noc_0447  type I restriction-modification system endonuclease  69.94 
 
 
163 aa  239  2e-61  Nitrosococcus oceani ATCC 19707  Bacteria  hitchhiker  0.00337855  n/a   
 
 
-
 
NC_008599  CFF8240_0985  type I site-specific deoxyribonuclease HsdR  27 
 
 
1023 aa  177  9.999999999999999e-43  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.271239  n/a   
 
 
-
 
NC_009135  MmarC5_0616  HsdR family type I site-specific deoxyribonuclease  26.65 
 
 
1024 aa  176  1.9999999999999998e-42  Methanococcus maripaludis C5  Archaea  normal  0.945786  n/a   
 
 
-
 
NC_007575  Suden_0948  Type I site-specific deoxyribonuclease HsdR  27.06 
 
 
1030 aa  172  2e-41  Sulfurimonas denitrificans DSM 1251  Bacteria  hitchhiker  0.000221808  n/a   
 
 
-
 
NC_009616  Tmel_0402  HsdR family type I site-specific deoxyribonuclease  26.31 
 
 
1055 aa  166  1.0000000000000001e-39  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_2674  HsdR family type I site-specific deoxyribonuclease  24.49 
 
 
1027 aa  166  3e-39  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_4621  type I site-specific deoxyribonuclease, HsdR family  25.63 
 
 
1028 aa  159  2e-37  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.250071 
 
 
-
 
NC_011884  Cyan7425_3081  type I site-specific deoxyribonuclease, HsdR family  25.61 
 
 
1027 aa  157  7e-37  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_0861  type I site-specific deoxyribonuclease, HsdR family  24.54 
 
 
1031 aa  157  7e-37  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE0366  type I restriction-modification system, R subunit  25.78 
 
 
1039 aa  151  6e-35  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1775  type I restriction-modification system restriction subunit  23.65 
 
 
1041 aa  148  5e-34  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_0948  HsdR family type I site-specific deoxyribonuclease  24.12 
 
 
1054 aa  148  7.0000000000000006e-34  Psychrobacter cryohalolentis K5  Bacteria  normal  unclonable  0.0000568458 
 
 
-
 
NC_009637  MmarC7_0017  HsdR family type I site-specific deoxyribonuclease  25.5 
 
 
1032 aa  142  3.9999999999999997e-32  Methanococcus maripaludis C7  Archaea  normal  0.13213  hitchhiker  0.00259353 
 
 
-
 
NC_013216  Dtox_4202  type I site-specific deoxyribonuclease, HsdR family  26.41 
 
 
1034 aa  142  3.9999999999999997e-32  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_2596  type I restriction-modification system, R subunit  23.9 
 
 
1059 aa  140  7.999999999999999e-32  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2197  HsdR family type I site-specific deoxyribonuclease  23.54 
 
 
1063 aa  140  1e-31  Shewanella baltica OS185  Bacteria  normal  0.511328  n/a   
 
 
-
 
NC_009801  EcE24377A_0289  HsdR family type I site-specific deoxyribonuclease  24.57 
 
 
1044 aa  139  2e-31  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_008761  Pnap_4782  HsdR family type I site-specific deoxyribonuclease  25.63 
 
 
1029 aa  139  3.0000000000000003e-31  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_0245  HsdR family type I site-specific deoxyribonuclease  24.55 
 
 
1038 aa  139  4e-31  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3790  HsdR family type I site-specific deoxyribonuclease  25.45 
 
 
1053 aa  138  6.0000000000000005e-31  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0157  HsdR family type I site-specific deoxyribonuclease  24.73 
 
 
1096 aa  136  1.9999999999999998e-30  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7554  HsdR family type I site-specific deoxyribonuclease  25.34 
 
 
1072 aa  135  5e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0430  type I site-specific deoxyribonuclease, HsdR family  24.14 
 
 
1030 aa  135  5e-30  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008043  TM1040_3549  HsdR family type I site-specific deoxyribonuclease  24.93 
 
 
1092 aa  134  7.999999999999999e-30  Ruegeria sp. TM1040  Bacteria  normal  0.276779  normal  0.254191 
 
 
-
 
NC_011312  VSAL_I1790  restriction enzyme  24.44 
 
 
1072 aa  133  2.0000000000000002e-29  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_1944  HsdR family type I site-specific deoxyribonuclease  24.48 
 
 
1034 aa  133  2.0000000000000002e-29  Polaromonas sp. JS666  Bacteria  normal  normal  0.31477 
 
 
-
 
NC_013165  Shel_17680  type I site-specific deoxyribonuclease, HsdR family  23.52 
 
 
1035 aa  132  3e-29  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_008573  Shewana3_4244  HsdR family type I site-specific deoxyribonuclease  25.33 
 
 
1084 aa  131  7.000000000000001e-29  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.00104553 
 
 
-
 
NC_009483  Gura_4037  HsdR family type I site-specific deoxyribonuclease  26.48 
 
 
1084 aa  131  8.000000000000001e-29  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1893  type I restriction-modification system, R subunit  23.64 
 
 
1069 aa  130  9.000000000000001e-29  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0008  type I site-specific deoxyribonuclease, HsdR family  25.19 
 
 
1099 aa  130  1.0000000000000001e-28  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1156  Type I site-specific deoxyribonuclease HsdR  24.39 
 
 
974 aa  129  3e-28  Anabaena variabilis ATCC 29413  Bacteria  normal  0.159677  normal 
 
 
-
 
NC_007951  Bxe_A0222  Type I site-specific deoxyribonuclease HsdR  24.12 
 
 
1028 aa  129  3e-28  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0037  HsdR family type I site-specific deoxyribonuclease  24.37 
 
 
1061 aa  129  3e-28  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_1863  type I site-specific deoxyribonuclease, HsdR family  24.06 
 
 
855 aa  127  8.000000000000001e-28  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1854  HsdR family type I site-specific deoxyribonuclease  23.72 
 
 
1026 aa  126  2e-27  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0011  type I site-specific deoxyribonuclease  24.94 
 
 
1061 aa  125  3e-27  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.386666 
 
 
-
 
NC_008009  Acid345_3755  HsdR family type I site-specific deoxyribonuclease  24.38 
 
 
1029 aa  125  5e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.0174443  normal 
 
 
-
 
NC_013411  GYMC61_0288  type I site-specific deoxyribonuclease, HsdR family  24.82 
 
 
1003 aa  125  5e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011668  Sbal223_4470  type I site-specific deoxyribonuclease, HsdR family  24.78 
 
 
1084 aa  122  3e-26  Shewanella baltica OS223  Bacteria  normal  0.566129  normal  0.610404 
 
 
-
 
NC_008146  Mmcs_0024  HsdR family type I site-specific deoxyribonuclease  25.25 
 
 
1108 aa  122  3.9999999999999996e-26  Mycobacterium sp. MCS  Bacteria  normal  0.955051  n/a   
 
 
-
 
NC_012793  GWCH70_1642  type I site-specific deoxyribonuclease, HsdR family  24.4 
 
 
1003 aa  122  3.9999999999999996e-26  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0032  HsdR family type I site-specific deoxyribonuclease  25.25 
 
 
1108 aa  122  3.9999999999999996e-26  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0395746 
 
 
-
 
NC_008740  Maqu_2392  HsdR family type I site-specific deoxyribonuclease  23.81 
 
 
1044 aa  122  3.9999999999999996e-26  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_2344  HsdR family type I site-specific deoxyribonuclease  23.71 
 
 
1045 aa  121  7.999999999999999e-26  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.0184878 
 
 
-
 
NC_013158  Huta_0101  type I site-specific deoxyribonuclease, HsdR family  24.44 
 
 
986 aa  120  1.9999999999999998e-25  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_007498  Pcar_2923  R (restriction) subunit/helicase  23.87 
 
 
984 aa  119  3e-25  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3424  HsdR family type I site-specific deoxyribonuclease  23.87 
 
 
984 aa  118  6e-25  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3386  HsdR family type I site-specific deoxyribonuclease  24.89 
 
 
1052 aa  116  2.0000000000000002e-24  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_2363  HsdR family type I site-specific deoxyribonuclease  24.35 
 
 
1067 aa  115  4.0000000000000004e-24  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.267976 
 
 
-
 
NC_010003  Pmob_1070  HsdR family type I site-specific deoxyribonuclease  23.84 
 
 
1067 aa  115  6e-24  Petrotoga mobilis SJ95  Bacteria  normal  0.558069  n/a   
 
 
-
 
NC_013161  Cyan8802_2281  type I site-specific deoxyribonuclease, HsdR family  25.62 
 
 
986 aa  114  7.000000000000001e-24  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.000865916 
 
 
-
 
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