| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0430 |
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| Symbol | |
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| ID | 8135739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 507673 |
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| End bp | 510765 |
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| Gene Length | 3093 bp |
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| Protein Length | 1030 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644868048 |
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| Product | type I site-specific deoxyribonuclease, HsdR family |
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| Protein accession | YP_003020268 |
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| Protein GI | 253699079 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 124 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCTGAAC AGCCCCGATC GGAACGCAAG ACGCAGAACC GCGTTGTCTC CCTTTTCACC
GATGGGAGCC GCCAAGATGG CCTCGGCTAC CGCTACCTCG GGGACTGGCA TGAACGCGCG
GACAACGGTC CGATCGAACC GGCACTATTG CGGCAAAACC TCAAGGCTAG AGGCTATTCC
GACGCTCACA TCTCCGCAGC CCTGCAAAAG CTCGAAAGAG CGGCGGAAGT CACGGGCACC
ACGCTCTACC AAGCAAACCT CCGCACTTAT CAGTTGCTGC GTTACGGCGT GCCGGTCCAG
GTCGCAGCAG GGCGCCCGCA TGAGACGGTG CACCTCGTCG ACTGGGAGCA CACGGATAAA
AACGACTTCG CACTGGCCGA GGAAGTGACC TTGCGCGGCG GATACGAGCG CAGGCCCGAC
CTGGTCATCT ACATGAATGG CATTACGGTG GGGGTGATCG AACTTAAGCG CAGTTCCGTG
GATGTGGCCG ACGGTGTGCG CCAGCTCCTA ACAAACCAGG AAGAGATCTT CAACGAGTGG
TTCTTCAGTA CCATCCAGTT CGTCTTTGCA GGAAGCGACT CGCAGGGATT GCGCTACGGC
ACTGTCGGCA CGCCGGAAAA GTTCTTCGTG GAGTGGAAGG CACCTGGACA CGATGGAGAA
TCTTCCCTTC CCGGCGCGCT CCTGGACCGG CCTCTTGCAG AGATGTGCGA GAAGGGGCGC
CTGCTCGATC TGATCCGTAA CTTCATCATC TTCGACGCCG GACAGAAGAA GGTGCCGCGA
CCGCACCAGT TCGCGGCGGT CAAGGCGGCC CAGGAGCGGA TCAGGACGCG CGAGGGAGGC
GTCATCTGGC ACACCCAAGG GAGCGGCAAA AGTATCCTGA TGGTGCTGCT GGCCAAGTGG
CTTCTGGAGC ACGACCCCGA GGGGCGAATC CTGATCGTCA CGGACCGCGA CGAGTTGGAT
AAACAGATCG AAGGGGTGAT GAAAAACGCC GGAGTCGTGG GGGCGGAATC CCCTTCGCCG
CGCATCACCT CCCGCGCACA GTTCTCCGAC AAGCTTGCCG CCACCTCGCC CCGGCTCTTA
TGCGCACTGA TTCACAAGTT CGACTTGGAC CCCAAAAGCG AGCCCCCGCC CATACGCGGG
CGCTTCTATG TGTTCGTGGA CGAATGTCAC CGCACCCAGG GCGGCGACAT GAACAAGCAG
ATGAAACGCT GGCTGGAAAA CGCCATCTTC ATCGGCTTCA CCGGAACTCC TCTTCTGCGC
CGCGACAAGC AAACCACCCG CGAGATCTTC GGCACCTACA TCCACACCTA CAAGTTCCAC
CAAGCGGTGG AAGACAAGGT GGTCCTGGAC CTGAAATACG AGGCCCGCAC CGTCCCTCAG
CGTCTCACCT CCAGAAAGGC GATCGATGAT TGGTTCGATC AGAAGACCCG GGGGCTGAAC
AACTACCAGC GCGCAGTCCT CCGCAAGAGG TGGGCGACGA TGGAGGAGCT GATGAGCTCC
GGCGAGCGCA AGCAGCGCAT CATCGCCGAC ATCATCCATG ACTTCGGGGT GCAGCAACGC
CTGAACAATG ACCGGGGCAC AGCCATGCTC GTGGCCGACT CCATCTACGA CGCCTGCCAT
TACTTCCGCC TGCTCCAGAA CACTTCTTTT GGTGCCTACT GCGGCATCGT CACCTCCTAC
GAACCAAACC ACAACGCCAT CTCCCGTGAA CCGAAGGATA GCGACGAGCG TTACAAGTTC
GACACCTACA CGCGCCATGT ACTGAGAGCG GGCCAGACTA CGAAGCAGTA CGAGGATGAA
ACGAAGCGTC GCTTCATCGA GGAGCCGGCC AACTGCAAAC TCCTCATCGT GGTGAGCAAG
CTTCTCACCG GCTTCGACGC ACCTTCCTGC ACTTACATCT ATCTCGACAG CAAGATGCAG
GACCACACCC TTTTTCAGGC CATCTGCAGG ACCAACCGGC TCGACGGGGA CGACAAGTCC
TTCGGCCATA TCGTCGATTA CAAGGAGCTG TTCGAGAAGG TGCAGAACTC CATCGCGGTC
TACAGCTCCG ATGAGCTGGA CATCGAAAAC GGGGACGGCG ACAACAACGT GAGGCTCAAG
GACTGGCTGA GAGAGGGTAA GGCGCAGCTC GACGCAGCCC GCGAGGCGCT CCGCTACCTC
TGCGAACCGG TGATGCAGCC GCGCGAGATG GAGCAGTATG TGGAGTACTT CTGCGGGTAC
GGCAACGGAC TCGAAGCCCT CGCTGCAACA GAGCCGCTGC GCATCTCGTA CTACAAGTCC
GTCGTCACCT TCCTGCGCGC CTATGCCGAT GTAGCGCAAA ACCTTGCCGA GGCGGGTTAT
TCCAGTGTCG AGATCGCCGC TTTGGAGCAG GAGACAAAAT TCCATTGCGA CACCCGGGCG
GCGATAAAGA ACCATTCGGG GGAAGAACTG GACATCAAGC CCTACGAGGC GGACATGCGC
CACCTCATCA ACACCTACAT ACAGGCCGAC CCCGCCACCG ACCTGGGCAA CCTGAGTTCG
CTCTCCCTTA CCCAGCTCAT CATAGAGACC GGCATCCACG ACGCCATAGC CCGGAAGCTC
AACCAGCAGG GGAAGCTCTC CCGTAACGCC ATCGCGGAGG GGATCATCAA CAACGTCCGC
AAGACGATCA TCCGAGAGAA GCTTACCGAC CCCAGATTCT ACGAGGAGAT GTCTAAACTG
CTCGAGGACT TGATCCGGCA GAAGCGGAAC GGCACGAAGT CCTACGAGGA ATTCCTGAAA
AAGGCAGAGG AGCTGGTCAG GCGCTTAGCG CGGAAGCATC CAGAGGCTGG CATCCCTGTA
GTTCTGTACG GCAAACCGGA AGCCATCGCG CTATTCAACA ATCTCCGCGG TATCCCGGCG
ACCAGCTTTC GCTATCCCAC GGATGATGAG GAGAGGGCGC AGCTAGCCCT GGATCTGGAC
CGGGTGGTAT GCGCTGAGGC TCCGGCCAAC TGGATAGGGG ACGATGCACG GGAAAAGCAG
GTCCTGAACG CCCTGTTCCC CAAGCTCGCG CGCGACCGCG AAGCCACGCT GGCAATCTTT
GAAATCGTCA AGAACCAACC AGGCTACAAA TGA
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| Protein sequence | MPEQPRSERK TQNRVVSLFT DGSRQDGLGY RYLGDWHERA DNGPIEPALL RQNLKARGYS
DAHISAALQK LERAAEVTGT TLYQANLRTY QLLRYGVPVQ VAAGRPHETV HLVDWEHTDK
NDFALAEEVT LRGGYERRPD LVIYMNGITV GVIELKRSSV DVADGVRQLL TNQEEIFNEW
FFSTIQFVFA GSDSQGLRYG TVGTPEKFFV EWKAPGHDGE SSLPGALLDR PLAEMCEKGR
LLDLIRNFII FDAGQKKVPR PHQFAAVKAA QERIRTREGG VIWHTQGSGK SILMVLLAKW
LLEHDPEGRI LIVTDRDELD KQIEGVMKNA GVVGAESPSP RITSRAQFSD KLAATSPRLL
CALIHKFDLD PKSEPPPIRG RFYVFVDECH RTQGGDMNKQ MKRWLENAIF IGFTGTPLLR
RDKQTTREIF GTYIHTYKFH QAVEDKVVLD LKYEARTVPQ RLTSRKAIDD WFDQKTRGLN
NYQRAVLRKR WATMEELMSS GERKQRIIAD IIHDFGVQQR LNNDRGTAML VADSIYDACH
YFRLLQNTSF GAYCGIVTSY EPNHNAISRE PKDSDERYKF DTYTRHVLRA GQTTKQYEDE
TKRRFIEEPA NCKLLIVVSK LLTGFDAPSC TYIYLDSKMQ DHTLFQAICR TNRLDGDDKS
FGHIVDYKEL FEKVQNSIAV YSSDELDIEN GDGDNNVRLK DWLREGKAQL DAAREALRYL
CEPVMQPREM EQYVEYFCGY GNGLEALAAT EPLRISYYKS VVTFLRAYAD VAQNLAEAGY
SSVEIAALEQ ETKFHCDTRA AIKNHSGEEL DIKPYEADMR HLINTYIQAD PATDLGNLSS
LSLTQLIIET GIHDAIARKL NQQGKLSRNA IAEGIINNVR KTIIREKLTD PRFYEEMSKL
LEDLIRQKRN GTKSYEEFLK KAEELVRRLA RKHPEAGIPV VLYGKPEAIA LFNNLRGIPA
TSFRYPTDDE ERAQLALDLD RVVCAEAPAN WIGDDAREKQ VLNALFPKLA RDREATLAIF
EIVKNQPGYK
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