| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0082 |
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| Symbol | |
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| ID | 5324625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus vannielii SB |
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| Kingdom | Archaea |
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| Replicon accession | NC_009634 |
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| Strand | + |
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| Start bp | 81811 |
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| End bp | 84855 |
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| Gene Length | 3045 bp |
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| Protein Length | 1014 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 640785750 |
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| Product | HsdR family type I site-specific deoxyribonuclease |
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| Protein accession | YP_001322608 |
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| Protein GI | 150398841 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0348133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAATA ATAATTATAA TCTTGTGGTG CAAAATACTG AAAGCACAGT TGTAGCAGAA
TATTCCCCCC ATAATGGGAA AAGACCTGAA ACTTACCAAA GCGAAGCAGA TTTAGAAAAT
GCATTTATTA AACAATTAAA ATCACAAGCT TATGAATATG TAAATATTAA TTGTGAAGAC
GATTTAATAA AAAACTTAAG AAAACAATTA GAAAAATTAA ATGATTTTAA ATTTTCAGAT
AATGAATGGG ACCAATTTTT TAAAACAGAA TTAGCAAATA AAAATCAAAG TATTGCAGAA
AAAACAAAGA CAATACAAGA AGATTATATT AAAATCTTAA ACTTAGATAG TGGAAACACT
AAAAACATTT ACTTACTAAA AAAAGATAAT ATTCACAGTA ATTTTTTACA AGTTATTAAT
CAATATGCTA CTGATGAAGG AAAATATAAA AATCGTTATG ATGTAACTGT TTTAGTAAAC
GGCCTTCCAT TAGTACACAT TGAACTTAAA AAAAGAGGAG TTGCAATAAA AGAAGCATTT
AACCAAATTA ATCGTTATCA AAGAGATAGT TTTTGGGCAG GAAATGGTTT ATACGAATAT
ATCCAAATTT TTGTAATTTC TAACGGAACT CATACAAAAT ATTACAGCAA TACAACAAGG
TCAGAACACC TTAAAGAAGC AAAAAACGAA ACAAAGAAAA ACGGAAAAAG AACAAGCAAT
AGTTTTGAAT TTACTAGTTG GTGGGCTGAC TCTAAAAATA AACCAATTAC TGATTTAGTT
GATTTTACAA AGACTTTTTT TGCAAAACAC ACAATTTTAA ACATTTTAAC TAAATACTGC
GTATTTACAA CAGATAAACA GCTTTTAGTT ATGAGGCCAT ATCAAATTGT TGCAACCGAA
AAAATATTAA ATAAAATTGA AGTAAGCACA AATTATAAAC AACTAGGAAC GGTAAAAGCA
GGAGGGTATA TTTGGCATAC AACTGGTTCA GGAAAAACTT TAACCAGTTT TAAAACTGCA
CAATTAGTAA GTAAGCTTCC TTTTATTGAT AAAGTCTTAT TCGTTGTTGA TAGAAAAGAT
TTAGACTACC AAACAATGAA AGAATACGAT AAATTTGAAA AAGGTGCAGC TAATAGTAAT
ACAAGCACAG CAATTTTAAA AAAGCAACTT GAAGACAAAA ACTCAAAAAT AATTATAACA
ACAATTCAAA AATTAGACCG ATTTATTAAA CGGAACAAAG GGCATACTAT TTTTGATGGT
CACGTTGTGT TAATTTTTGA TGAATGTCAC CGTTCCCAAT TTGGAGATAT GCATTTAGGA
ATTACAAAAG CATTTAATAA ATATCATCTT TTCGGGTTTA CTGGAACTCC TATTTTTGCA
GTAAATTCAT CTTCTGGCGG TAGAGTTGAT TTAAAAACAA CAGAACAAGC TTTTGGCGAT
AAATTACATA CTTATACTAT TGTTGATGCA ATTGCTGATA AAAATGTTCT ACCTTTCAAA
GTAGATTATA TTTCTACACT TAAAGAAGCA GAAAATATTG AAGATAAAAA AGTTAGTACT
ATTGATAGGG AAGCTGCACT TTCAGCTCCT GTTAGACTAA ATAATATTGT TAAATATATT
TTAGAACATT TTGACCAGAA AACAAAACGA AATGTTTCGT ATAAATTAAA AGAAAGAAGA
TTAAGGGGCT TTAATTCTAT TTTTGCAGTT TCTTCTATTG ATATGGCAAA AAAATATTAT
ACTGAATTTA AAGAACAACT AAATGATTTA CCAAGCGATA AAAAGCTTAA AGTTGCAACA
ATTTATAGTT TTGGTGCAAA TGAAGAAGAA ATTGACGGAA TTATTGATGA AAATTCGGAA
GAAACAAGCG GACTTGATGC AAGTTCAAGA GATTTTTTAG AAAATGCAAT TAAAGATTAT
AATAAAATGT TTGGAACATC TTATGATACA AGTTCAGATA AATTTCAAAA TTACTATAAA
GATGTAAGTG AAAGAGTAAA AAATAGGGAA ATAGATATTT TAATAGTAGT AAATATGTTT
TTAACTGGAT TTGACGCAAC TACCTTAAAC ACTCTTTTTG TTGATAAAAA TTTAAGATTA
CATGGATTAC TTCAAGCATA TTCTCGAACT AACCGTATTT TAAACAGTAT AAAAACTTTT
GGAAATATTG TATGTTTTAG AAATTTAGAA AAAGCAACTA ATGAATCAAT TTCACTTTTT
GGAGATAAAG AAGCTTGTGG AATCGTTTTG TTAAAAACAT ATCAAGAATA TTATAATGGA
TATGAAAAAG ACGGAAAAGA AATAAAAGGA TATAAAAGTT TAGTTGAAGA ATTACAAGAT
AAATTTTCTA TTGGGGAAAG AATACTCGGA GAACAAAACC AGAAGGATTT TATCAAACTT
TATGGCAGTA TTTTAAGAGT TAAAAATATT CTTAATACTT TTGATGAATT TATTGGAAAT
GAAATTTTAT CAGAAAGAGA TGTTCAGGAC TATCATAGTT TATATATTGA TTTATATAAC
GAATTTAGAA AAAACGATAC AGAAAAAGAA AATATTAATG ACGATATTGT TTTTGAAATG
GAACTCATTA AACAAATTGA AATTAATATT GATTATATTT TAAAGTTAAT AAAAAAATAT
CATGAAAAAA ATACTAAAGA TAAAGAAATT TTATTGGATA TAAATAAAGC AATAGATTCA
AGCGTAGAAT TAAGAAATAA AAAAGACCTT ATTCATCAAT TTATTGAATC CATCAATAAA
AACTCTAATT TAGATGAAGA TTGGCAGAAA TTTGTAGAAA AAAAGAAAAT TGAAGAATTA
GAAAAAATAA TTAATGAAGA AAATCTTAAT CATGACGAAA CATGCAAATT TATAAAGAAC
TCGTTTAGGG ACGGAAATAT TCAAACAACA GGAACTGCAA TCACTAAGAT TTTCCCGCCA
GTTTCAAGAT TTTCTAAAAC TGGAGAAAGA ACTAAAAAAA GAGAAATAAT TATTGAAAAA
TTAACTAGAT TCTTTGAAAG ATTTTTTGAT ATATCGAAAT TTTGA
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| Protein sequence | MSNNNYNLVV QNTESTVVAE YSPHNGKRPE TYQSEADLEN AFIKQLKSQA YEYVNINCED
DLIKNLRKQL EKLNDFKFSD NEWDQFFKTE LANKNQSIAE KTKTIQEDYI KILNLDSGNT
KNIYLLKKDN IHSNFLQVIN QYATDEGKYK NRYDVTVLVN GLPLVHIELK KRGVAIKEAF
NQINRYQRDS FWAGNGLYEY IQIFVISNGT HTKYYSNTTR SEHLKEAKNE TKKNGKRTSN
SFEFTSWWAD SKNKPITDLV DFTKTFFAKH TILNILTKYC VFTTDKQLLV MRPYQIVATE
KILNKIEVST NYKQLGTVKA GGYIWHTTGS GKTLTSFKTA QLVSKLPFID KVLFVVDRKD
LDYQTMKEYD KFEKGAANSN TSTAILKKQL EDKNSKIIIT TIQKLDRFIK RNKGHTIFDG
HVVLIFDECH RSQFGDMHLG ITKAFNKYHL FGFTGTPIFA VNSSSGGRVD LKTTEQAFGD
KLHTYTIVDA IADKNVLPFK VDYISTLKEA ENIEDKKVST IDREAALSAP VRLNNIVKYI
LEHFDQKTKR NVSYKLKERR LRGFNSIFAV SSIDMAKKYY TEFKEQLNDL PSDKKLKVAT
IYSFGANEEE IDGIIDENSE ETSGLDASSR DFLENAIKDY NKMFGTSYDT SSDKFQNYYK
DVSERVKNRE IDILIVVNMF LTGFDATTLN TLFVDKNLRL HGLLQAYSRT NRILNSIKTF
GNIVCFRNLE KATNESISLF GDKEACGIVL LKTYQEYYNG YEKDGKEIKG YKSLVEELQD
KFSIGERILG EQNQKDFIKL YGSILRVKNI LNTFDEFIGN EILSERDVQD YHSLYIDLYN
EFRKNDTEKE NINDDIVFEM ELIKQIEINI DYILKLIKKY HEKNTKDKEI LLDINKAIDS
SVELRNKKDL IHQFIESINK NSNLDEDWQK FVEKKKIEEL EKIINEENLN HDETCKFIKN
SFRDGNIQTT GTAITKIFPP VSRFSKTGER TKKREIIIEK LTRFFERFFD ISKF
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