| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2674 |
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| Symbol | |
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| ID | 6200265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | + |
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| Start bp | 3042685 |
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| End bp | 3045768 |
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| Gene Length | 3084 bp |
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| Protein Length | 1027 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641706621 |
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| Product | HsdR family type I site-specific deoxyribonuclease |
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| Protein accession | YP_001833735 |
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| Protein GI | 182679589 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAA AGCCCCATTC TTCCATTGGC CAGACCGAGA AAAAAACCCA GGCGCGCGTC
GTCGCTCTTT TCCGCGACCA GCTCGGCTAT GATTATCTTG GCAACTGGAT CGATCGCGAA
AACAACCGCA ATATCGAGGA AGCCTATCTC CGGCCCTTTC TCAAAACGCG CGGATATGAC
GAGGCGCTGA TCAGCCGCGC CCTTTATGAA CTCAATAAAG CCGCGACCGA TCAATCCCGC
AGCCTCTACG ATGTCAATCG TTCCGTCTAT GATCTCTTGC GCTATGGCGT GAAGGTAAAG
GCCGATGTGG GCGAGACGAC GCAAACCGTC TGGCTGATCG ATTGGAAGAA TTTTGCCGCC
AACCATTTCG CTATCGCCGA GGAAGTGGCA GTCAAGCCCG CGAGCGCTTC CGACAAAAGC
ACAGCGAAAG CCTGGGGGAA ACGCCCCGAT GTGGTGATTT ATGTCAACGG CATCGCGCTC
GCCGTGCTGG AACTCAAGCG CTCGACGGTT GCGATCTCAC AAGGCATTCG CCAGAATCTC
GACAACCAGA AGAAGGTTTT TATCCAACAC TTCTTCACCA CCATGCAGCT GATCATGGCG
GGCAGTGACA GCGAGGGTCT GCGTTATGGC GTGATCGAAA CGCCCGAGAA ATATTATCTC
GCTTGGAAGG AAGAAAGCCC GGTCCAAAAT CCTCTCGATC GCGCGCTGCT TCAACTCTGT
GAAAAATCGC GTTTCCTGGA ACTGATTCAC GATTTCATTG TCTTCGACGC CGGCACGAAA
AAGACCTGCC GTCAGAACCA ATATTTTGGC GTGCATGCGG CGCAAGACCA TGTTCGCCGC
CGTGAAGGTG GGATCATCTG GCACACGCAA GGCTCAGGCA AAAGCCTGAC CATGGTCTGG
CTCGCGAAAT GGATACGCGA GCATGTGAAG GATGCGCGCG TACTCATCAT CACCGACCGG
ACCGAACTCG ACGAGCAGAT CGAGAAAGTG TTCAAGGGCA TCAATGAGGA GATCGTCCGT
GCCAAAAGTG GCGCCGATCT CGTCGCCAAA CTAAACGACA CGAATCCCTG GCTTCTATGC
TCGCTGATCC ACAAATTCCG TGGCAGGGAA GATGAAGAGG GTGATGTCCC CGGCTATATC
GAGGAAGTCC GCGAGGCGCT GCCGAAGGAT TTCCGCGCCA AGGGCGATAT TTTTGTCTTC
GTGGACGAAT GCCATCGCAC GCAAAGCGGC GCCTTGCACG ACGCTATGAA GGCTATTCTA
CCGAGCGCCA TGTTCATAGG TTTCACCGGC ACGCCACTTT TGAAGGCGGA TAAGAAAACC
AGTCTCGAAA TCTTTGGCCC CTATATCCAT ACCTATAAAT TCGATGAAGC GGTGAGCGAT
GGCGTCGTGC TCGATCTGCG TTATGAGGCG CGCGACATCG ACCAGAACAT CACCTCGCCC
ACCAAGATCG ACCAATGGTT CGCGGCCAAG ACCAAGGGAT TGACCGATCT CGCCAGGGCG
CAGTTGAAAC AGCGCTGGGG CACTTTGAAG AAAGTGCTCT CGAGTCAATC GCGTTTGGAA
AAAATTGTTG AAGACATCCT TCTCGATTTT GCGCTCAAGG ATCGGCTGGC GGGCGGACGC
GGCAACGCGA TGCTCGTTTC ATCCAGCATT TATCAAGCGT GTAAATTCTA TGAATTGTTT
GACAAGACCG AGCTCTCCAG TAAATGCGCG ATCATTACCT CCTATAAGCC GTCACCCAAT
GATCTGAAAG GAGAGGACAG CGGCGAAGGT CTGACGGAGC GGTTGCGGCA ATATGAAATC
TACAACAAAA TGCTTGAGGG CCGAGACCCG GAGACCTTCG AGAAGGAGGT GAAGAAAAAA
TTCATCGATG AACCAGGACA GATGAAGCTT CTAATCGTGG TGGACAAGCT TCTGACCGGC
TTCGATGCAC CTTCAGCGAC CTATCTCTAT ATCGACAAGC ACATGCAGGA TCATGGCCTG
TTCCAGGCCA TTTGCCGCGT GAACCGTCTT GATGGGGATG ATAAGGAATA TGGCTACATC
ATAGACTACA AGGATCTTTT CAAAAGCCTC GAAAGCTCGA TCAAGGATTA TACTGCCGAG
GCTTTTGAAG GCTATGATAA AGCGGATGTC GCCGGCCTTT TATCCGACCG GCTTGAAAAG
GCGCGCGAAA GGCTGGATGA AGCCCTCGAA GCGGTGCGCG CACTCTGTGA ACCTGTTGAA
GCGCCTCGTG ACACAGCGGC TTTCCTTCAA TTCTTCTGCG CGAAAGACAC AGCCGATAAA
ACCGCACTGA AGGAAAACGA ACCGAAACGG CTCACCCTCT ACAAGCTGGT CGCCTCTCTG
CTGCGCGCCT ATGCCGATAT CGCGAACGAA ATGCCAGAAG CGGGCTATAG CGATGCTGAA
ATCGCGGCGA TCAAGGCCGA AGTCGATCAT TTCACGCACG TCCGCGATGA AGTAAAGCTC
GCAAGCGGCG ATTATATCGA TCTCAAAATG TATGAGCCGG CGATGCGGCA CCTGATCGAC
ACCTATATCC GGGCAGACGA AAGCAGGCTG ATTTCCGCCT TCGACGATAT GTCGTTGGTG
CAGATGATCG TCGAGCGCGG AGCGGATGCG GTGGATGCCT TGCCGAAGGG CATTCGCGAA
AACAAGGAAG CCGTCGCCGA AACAATTGAA AACAATGTGC GTAAGCTTAT CATCGAAGAA
ACGCCGATCA ATCCGAAATA TTATGAAACT ATGTCGGATC TTCTGGATGC GCTGATCGTT
CAGCGCAAAC AGCAGGCGAT TGCCTATGAG CAATATCTCG CGGAAATCGT CGCGCTCACG
AAGAAAGCGA AGAATTCAGC CACTGGAGCG ACCTATCCCA CAACGATGAA CACCGCCGCG
AAACGCGCCC TCTATGATAA TCTCGGCAAG GATGAAGCCT TGGCGATAGC GATTGATGCA
GACATCCGTA AGAAAAAGCA AGATGATTGG CGTGGGCATA GGGGTAAGGA GCAAATGGTG
CGCAACATTA TCCGAACACA TCTCACCGAT CCGGCGCTTG TCGATCAGAT CTTCGATCTG
GTGAGAAGCC AACATGAATA TTGA
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| Protein sequence | MSQKPHSSIG QTEKKTQARV VALFRDQLGY DYLGNWIDRE NNRNIEEAYL RPFLKTRGYD
EALISRALYE LNKAATDQSR SLYDVNRSVY DLLRYGVKVK ADVGETTQTV WLIDWKNFAA
NHFAIAEEVA VKPASASDKS TAKAWGKRPD VVIYVNGIAL AVLELKRSTV AISQGIRQNL
DNQKKVFIQH FFTTMQLIMA GSDSEGLRYG VIETPEKYYL AWKEESPVQN PLDRALLQLC
EKSRFLELIH DFIVFDAGTK KTCRQNQYFG VHAAQDHVRR REGGIIWHTQ GSGKSLTMVW
LAKWIREHVK DARVLIITDR TELDEQIEKV FKGINEEIVR AKSGADLVAK LNDTNPWLLC
SLIHKFRGRE DEEGDVPGYI EEVREALPKD FRAKGDIFVF VDECHRTQSG ALHDAMKAIL
PSAMFIGFTG TPLLKADKKT SLEIFGPYIH TYKFDEAVSD GVVLDLRYEA RDIDQNITSP
TKIDQWFAAK TKGLTDLARA QLKQRWGTLK KVLSSQSRLE KIVEDILLDF ALKDRLAGGR
GNAMLVSSSI YQACKFYELF DKTELSSKCA IITSYKPSPN DLKGEDSGEG LTERLRQYEI
YNKMLEGRDP ETFEKEVKKK FIDEPGQMKL LIVVDKLLTG FDAPSATYLY IDKHMQDHGL
FQAICRVNRL DGDDKEYGYI IDYKDLFKSL ESSIKDYTAE AFEGYDKADV AGLLSDRLEK
ARERLDEALE AVRALCEPVE APRDTAAFLQ FFCAKDTADK TALKENEPKR LTLYKLVASL
LRAYADIANE MPEAGYSDAE IAAIKAEVDH FTHVRDEVKL ASGDYIDLKM YEPAMRHLID
TYIRADESRL ISAFDDMSLV QMIVERGADA VDALPKGIRE NKEAVAETIE NNVRKLIIEE
TPINPKYYET MSDLLDALIV QRKQQAIAYE QYLAEIVALT KKAKNSATGA TYPTTMNTAA
KRALYDNLGK DEALAIAIDA DIRKKKQDDW RGHRGKEQMV RNIIRTHLTD PALVDQIFDL
VRSQHEY
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