| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_2392 |
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| Symbol | |
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| ID | 4656668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | + |
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| Start bp | 2673109 |
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| End bp | 2676243 |
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| Gene Length | 3135 bp |
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| Protein Length | 1044 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639812367 |
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| Product | HsdR family type I site-specific deoxyribonuclease |
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| Protein accession | YP_959655 |
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| Protein GI | 120555304 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCAGG ATGAAGTCGA AAAAGTCGAA CTGCCCGCCA TTGAGCAACT GACCCGCCTT
GGCTGGACCT ACGTGCCCGG CACCGACCTT GCGCCAGTCC TACCCGTGGA TGGCGCACCG
GTCGGAGAAC GAGGCTACTA CCGGGATGTA GTGTTGTCCA AACGACTGGA AGCTGCCGTG
GTCCGGTTGA ACCCATGGAT CAGTGACGAA AACCTGCGCA AAGTGGTCCG GGAATTCACC
CATCCCAACC ATGCGGGCTT GATGGAATAC AACCAGTCCA TCTATGACCT GCTGGTGAAC
TACCTGTCCG TTGAACAGGA CCTGGGTGCC GGTCGCAAGG GGCAGACGGT CAAGGTCATC
GACTTCGACA ACCCTGATAA CAACGAATTC CTATGCACTA ACCAATTCAA GGTTGAAGGC
ATCAACCAGA ACATCATCCC GGATGTTGTC TGCTTCGTGA ACGGCTTACC GCTGGCGGTC
ATTGAGTGCA AATCGCCGTA TGTTGCCGAC GCGGTAGCTG AAGGCATTAA CCAGCTGCGC
CGATACGCCA ACCTGCGCAC CCCGGAAGAC GATGAAGGTG CCCAGAAGCT GTTCTGGTAC
AACCAGCTGA TGGTATCCAC CTGCCGGGAT CAGGCGAAGG TGGGCACCAT CAGTTCCAGC
GCCCAGCATT ACGGGGACTG GAAGGATGCT TACCCGTTTA CCGATGCCGA TATTCAGGCG
ATGGTGCAAC AGCCTGCCTT TATCTCCACC GGCTCGACAG CATCCAGCCA CAAGACCGGT
GACGTACCCT CACCAGAGTA TCTGGTTGCC GCGAAACAGA TCGCTTCAGG TGCTGGAACC
AGTTCAGGCG AAGTCACCCC GCAACAGCGA TTACTTGCCG GTATGTTCAA CCCCGCCAGC
TTCCTGGACC TGATGCAGAA CTTCACCCTG TTCGAACCGG TGGATGGTCG GCTGGTCAAG
AAAGTGGCAC GGTATCAGCA ATACCGAGCG GTGAATAAGG TCATAGAACG CCTTAAGAAC
GGCACCACGC GCAAGGAAAA GTCCGGGGTA GTCTGGCATA CCCAAGGCTC CGGAAAGTCC
CTGACGATGG TTATGCTGGC GGTGAAGATG CGCCGTGACC CGGAGTTGAA GCAGTACAAG
CTGGTGTTCG TGACTGACCG CACCCAACTG GACGGGCAAC TCTCGAAAAC CTTCCGGGAT
GCCCAGAACG AAACTATCTA CAACGCTGGG TCAGTGGCGG AACTGAAGGA CCTGTTGTCC
AAAGATTCTT CCGACATTGT GACCGCCATG GTGCAGAAGT TTCAGGAAGC GGAGCAGGAA
GGCGACTTTA CGGACCTGAA CCCCAGCGAA AAGATCATTG TGCTGGCGGA TGAAGCCCAC
CGTACCCAGT TTGGCGGGCT GGCAATGACC ATCAATGCCG CCCTGCCCAA TGCCCCGAAG
ATCGGCTTTA CCGGCACTCC CCTGCTGAAG TCCCAGAAGA TGAACAAAGC CTTCGGTGGC
TACATCGACA AGTACAAGAT CAACGAAGCC GTGGATGACG GTGCCACCGT GCGCATCATC
TACGAAGGTC GTCAGGTTCA GAGCGATGTG GTGGGTGACT CGCTGGATGC GCTGTTTGAA
GAATACTTCA AAGACAAAAG CGACGACGAA AAGCGGGAAA TCAAAAAGAA ATACGGTGTG
GAACGCGCGG TACGGGAAGC CCCTGCCCGT ATTCGCTGGG TGTGTATCGA CCTGCTGAAG
CATTACCGGG AAAAGATTCA GCCCAACGGC TTCAAAGCCA TGATTGTGGT GGGCAGCCGC
CATGCCGCCA CGGTGTTCAA GAAGACCCTG GACGATCTGG AAGCGCCCCC TTCTGAAGTG
ATCATTTCCG GCACCCACAA CGACCCGGCA TACCTCAGCA AGTACACCGA CAGCGCGCAC
CAGAAGCAGG TGATCAAGAA CTTCACCAAG CCGCTGGGAA CGGATAAAGA GAAGGAAGAC
CCCACCAGCT TCCTGATCGT GAAGGATATG CTGCTGACTG GCTTCGATGC GCCTATTGCA
CAGGTGATGT ATATCGACCG GAGCCTGAAG GACCACACCT TGATGCAGGC AATCGCACGG
GTGAACCGAA CCTATAAGGG CAAAGCCTGC GGTTACGTGG TGGATTATTA CGGGCTGTCA
GACTACCTGA CCGACGCGCT GAAGCAGTTC AGTAGTGAGG ACGTGGAAGG CACCTACCAC
ACCCTGAAGG ATGAAATACC GCGCCTGAAA GCGGCTCACA CCCGTGTGGC TGCCATCTTC
GCCGGTGTTA AAGGCACGGA TGTAGATGAC TATGTGCTTC ACCTGAAGGA TGAAGACACC
CGCCAGCAGT TCGAACTGGC GTTCAGGAAG TTCGCCAAGC AGATGGACGT GATTCTGCCG
GATATCGCCG CCAAGCCGTT CATCCCGGAC CTGAAGTTGT GGGGCAAGGT TCAGAACGCC
GCCCGTAACC GCTACCGGGA CCCCGGACTG AACATCAGCG ATGCTGGTGC GAAAGTCCGC
CAGCTGGTGG ATGAACACAT CATCAGCACC GGGGTAGACC CGAAGATTCC ACCCGTGGAC
CTGATGGCAG CGAACTTCAA GGAAACCGTG GAGCAGATCA AATCCCCGGA ATCCCGCGCA
TCCGAAATCG AAAGCGCCAT CAAGCACCAC ATCACGGTGA ATCTGGACGA AGACCCGGAA
TACTACAAAT CCCTGAGCCT TCGCCTGCGG GACATAATCG AAAAGACGGC GGGCAAGTGG
GACCAGCAGT TGGAACTGCT GCTTCAGATG GTCGATAGCA TGGAGTCTGA ACACAAACAG
GCTGCTGACG ATCTGGGGCT GAGTGAAACC GAATTCGCCT TCTACAACAT CCTGATGGCA
GAAGTGACCA GCCATGCCGG TGAAGATGCC ATCAGCGAAG CCGTACACAA CGAAATCAAG
GCAACCAGCC AGGACCTGGT GGGCATGTTC GATGAAGCCA CCCAGATTGT GGACTTCTTC
AGCAAGCCGG ACGAAGTGAA GCGAATGAAG AAGGAAATCA AACGGGCGGT TCTTGATTGT
TCGTTTGGCG AGAAAGCCCT GGTGAACGTG GTTCAGGATC GTTTCATGGA CCTTGCGAAG
AACAAGTTTA AATGA
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| Protein sequence | MFQDEVEKVE LPAIEQLTRL GWTYVPGTDL APVLPVDGAP VGERGYYRDV VLSKRLEAAV
VRLNPWISDE NLRKVVREFT HPNHAGLMEY NQSIYDLLVN YLSVEQDLGA GRKGQTVKVI
DFDNPDNNEF LCTNQFKVEG INQNIIPDVV CFVNGLPLAV IECKSPYVAD AVAEGINQLR
RYANLRTPED DEGAQKLFWY NQLMVSTCRD QAKVGTISSS AQHYGDWKDA YPFTDADIQA
MVQQPAFIST GSTASSHKTG DVPSPEYLVA AKQIASGAGT SSGEVTPQQR LLAGMFNPAS
FLDLMQNFTL FEPVDGRLVK KVARYQQYRA VNKVIERLKN GTTRKEKSGV VWHTQGSGKS
LTMVMLAVKM RRDPELKQYK LVFVTDRTQL DGQLSKTFRD AQNETIYNAG SVAELKDLLS
KDSSDIVTAM VQKFQEAEQE GDFTDLNPSE KIIVLADEAH RTQFGGLAMT INAALPNAPK
IGFTGTPLLK SQKMNKAFGG YIDKYKINEA VDDGATVRII YEGRQVQSDV VGDSLDALFE
EYFKDKSDDE KREIKKKYGV ERAVREAPAR IRWVCIDLLK HYREKIQPNG FKAMIVVGSR
HAATVFKKTL DDLEAPPSEV IISGTHNDPA YLSKYTDSAH QKQVIKNFTK PLGTDKEKED
PTSFLIVKDM LLTGFDAPIA QVMYIDRSLK DHTLMQAIAR VNRTYKGKAC GYVVDYYGLS
DYLTDALKQF SSEDVEGTYH TLKDEIPRLK AAHTRVAAIF AGVKGTDVDD YVLHLKDEDT
RQQFELAFRK FAKQMDVILP DIAAKPFIPD LKLWGKVQNA ARNRYRDPGL NISDAGAKVR
QLVDEHIIST GVDPKIPPVD LMAANFKETV EQIKSPESRA SEIESAIKHH ITVNLDEDPE
YYKSLSLRLR DIIEKTAGKW DQQLELLLQM VDSMESEHKQ AADDLGLSET EFAFYNILMA
EVTSHAGEDA ISEAVHNEIK ATSQDLVGMF DEATQIVDFF SKPDEVKRMK KEIKRAVLDC
SFGEKALVNV VQDRFMDLAK NKFK
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