| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_4037 |
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| Symbol | |
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| ID | 5166252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 4691718 |
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| End bp | 4694972 |
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| Gene Length | 3255 bp |
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| Protein Length | 1084 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640551516 |
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| Product | HsdR family type I site-specific deoxyribonuclease |
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| Protein accession | YP_001232754 |
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| Protein GI | 148266048 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAT ATCTCCACGT AGAAAAACCA TTCCTTGACC AGCTCGCCGC ACTGGGCTGG
ACGGTAATCG ACCAAGGTCA GGGGTTTATC CCCTCCGATC CTACGGCCAG CCTGCGCGAC
ACCTTCCGCG AATGGCTGCT CCCTGATGTC TTCCACAATG CCGTGCGCGC CATCAACCGC
ACCGCCGACG GTACCCCCTG GCTGACCGAT CGCCAACTCG ATGACCTCCG GTCACAAATC
CTGCGCCAGC CAAACCGTAC CCTGCTTGAA GCCAACGAGG CGGTACAGGC GCTCTTCCTC
AAGGCACAAG TGGATCGCAA TGAGATCAGC GGCGAGCCAG ATCCTGTGGT CCAGCTCATT
GACTTCTCCC ACCCCGAGCG CAATCAGTTC CACGCCATCA ACCAGTTCCG CATCGACACG
CCCGGCTACG TGAAGAAATG CATCATCCCG GATATCGTAC TCTTTGTGAA CGGCATCCCG
CTGGTGGTGA TCGAGGCCAA GATCGGCGAC GCCACCACGG CCAACCCGAT GCACGCCGCC
TTCGAGCAAC TGCTTCGCTA CCGCAACGGC CGCCCGGAAA CGGCTGCTGC CGGCCTGCGC
GAAGGAGAGC CGCGCCTGTT CCACACGAAT TTGCTGCTGA TACGCACCTG TGGCGAGAAA
GCGGAGTTTG GCAGCATCAC CTCGGGCCAC GAGCACTTCT ACGCCTGGAA GGACATTTGG
CCGGAGGAGA ACCGCAATTA CACGCCGCCG CTGGGGATCG AGCGCGAACA GGAGCGGCTG
ATCCAGGGGC TGCTCGCCCC AACGACGCTC CTGGATGTGC TGCGCACCTG CACGGTCTTC
ATGGATACCG ACTCCGGCAA GCGGGTGAAG GTGGTCTGCC GTTACCAACA GTACCGCGCT
GCCCACCGGA TCGTTGAGCG CCTGCGCACC GGCAAGACAT CAGAGGAGCG CTCTGGCGTC
GTCTGGCACA CCCAGGGCTC GGGCAAGTCA CTGACTATGG TTTTCGTGGC CCGCATGCTG
CGGGCATCAC AAGACCTGGC CGACTTCAAG ATCCTGCTGG TCAACGACCG CGTCGATCTG
GAGGATCAAC TTGCAGCCAC TGCCAAGCTG ATCGGCGGCA AGGTTAATGT GATTGAGAGT
ACGGCAGCGT TGCGCGAGCA CCTGAGTACC GATACCTCCG ACATTAACAT GGTGATGGTA
CACAAGTTCA TGGAACGTGC CGAAGCGCTG CCGACCATGG TTGCCGAGGC GCTTGCAGCC
TACCGCCCGC CGCCGTCCGG AGCAACTTTT GGCGTGGTCA ATCCGTCCGA ACGCATCCTG
CTGATGATTG ACGAGGCGCA CAGGACGCAA GGCTCCGACC TGGGTGAAAA CATTTTCGAG
GCATTCCCCA ACGCTACCCG CATCGCCTTC ACCGGCACCC CGCTTATCTC CGAGCAACAC
GGCAGCAAGC GCACGGTGAA GCGTTTCGGC GAATACATCG ACACCTACAA GCTGATGGAC
GCGGTGCATG ACGGCGCGAC GCTGCAGATT CTCTACGAAG GACGCACGGC GGACACGGCG
TTGAAGGACA AGCACGGCTT CGACACCAAG TTCGAAGACC TCTTCAAGAA CCGGAGCGAA
GAAGAACTCC TCGTCATCAA GAAGAAATAT GGCGCCAGCG GCGACATCCT GGAAGCCGAG
CAGCGCATTG CGGCCATTGC CCGCGACTTG GTGACGCACT ACGTCGACAA CATCCTCCCC
GACGGTTTCA AGGCGCAGGT TGTCTGCCAC TCCAAGCTGG CGGCGATCCG CTATCAGAAA
TCGATCCGTG AAGCCCTGGC CGAGCGCCTT GACGTGGAGA AGCTCAAACA GAAGCCCGAC
ACCGAACTGA TTCGCCGCAT CGCCTTCCTG AAGGCCGTGG TAGTGGTTTC CGCTGACGCC
ACCAACGAAC TGGCCGCCAT CACCGAGGCG CGCAAGGAGG CGAAACGCTG GAACGCGGTG
GAGAACTTCT GCAAACCTTT TGATCTGGAC GACCCGGACA AGGATCTGAC TGGAATCGCC
TTCCTGATCG TCTGTGACAT GCTGCTGACC GGCTTCGACG CCCCGGTTGA GCAGGTGATG
TATATCGACA AGCGTTTGCG CGAGCACAAC CTGCTACAGG CCATTGCCCG GGTGAACCGG
GTGACGAAGA ACAAGCACCG GGGGTTCATC GTCGATTACA TCGGCCTGGC CAACCACCTG
ATGGAGGCGC TCAGCATCTA TTCCGATGAG GATGCAGAAG ACATCCAGCA AGGGCTGAAA
AACCGGCTCA CCGAACTGCC GATTCTGGAA GAACGCTATC AGCGTCTCCT GCAGCATTTC
CGCGCAGCCG GGGTAGGGGA GATCGAAGCC TTCGTAAAGG GTGAACTGGC AACACCAGAG
TCTGACGTGG CCGTGGTGCA TGCGGCTGTG GGAGCGATGC AGGACATCAA GCGCCGGGCG
GACTTCGAGG TCTACCTGAA GAAGTATCTC CAAAGCCTGA ACCTGATCCT CCCCCACGCG
TCGGGGCATC CCTACCGCGG CCCGGCAAGG CGTTTCGGCT ATCTCCTCCG CATGGTCAAG
GAGCGCTACA AGGACGACTC CCTCGACATC TCCGACGCCG GTGAGAAGGT GAAAGCGCTG
ATCAACGAGC ACCTTATCGA CCTGGGGATA AATCCCAAGA TCCCCCCCAT AGAGCTTCTG
TCGGACGACT TCATCTCCAA TGTGCAGAAG CATTCCCAGG GAAACCCGGA GGCGAAGGCG
AGTGAGATGG AGCATGCCAT CCGCAAACAC TGCACAATCC ACTTCGACGA AGACCCGGCC
TTCTACAAGC GGCTGAGCGA GAAGCTGGAA AAGCTGATCC AGGAGCACAA GAACCAATGG
GAGGTGCTGG CCGAGGGGTA TGAACAACTC AGAAGCGAAG CCCTGGCGGG CCGGACGGAT
GCTGAGGAAG GCTTGACCAG GGAGGCTACC ACCTTCTACG ACTACGTGGT GCAGCTCGCT
TTCGAGAATG GCGAAGTGCC CGGGAATCAT CGGCATCAGT TGAAGAGGCT GATGGCTGGC
ATCGTGGAGA TGTTGCAAGG TACTATCGGC ATCATCGACT TCTGGAAGAA GCCAATCGAG
GTAAAGAAAC TTCGGGGGAA CATCGACACC GAGATCCTGC TGACCGAGAT CCCGCAACTC
ATCGACAAAC ACGAACGGAT CGCGGTGGAG ATTGTGAAGC TCGCCGAAAA ACGCCACCAG
GAGCTGACAC GATGA
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| Protein sequence | MSEYLHVEKP FLDQLAALGW TVIDQGQGFI PSDPTASLRD TFREWLLPDV FHNAVRAINR
TADGTPWLTD RQLDDLRSQI LRQPNRTLLE ANEAVQALFL KAQVDRNEIS GEPDPVVQLI
DFSHPERNQF HAINQFRIDT PGYVKKCIIP DIVLFVNGIP LVVIEAKIGD ATTANPMHAA
FEQLLRYRNG RPETAAAGLR EGEPRLFHTN LLLIRTCGEK AEFGSITSGH EHFYAWKDIW
PEENRNYTPP LGIEREQERL IQGLLAPTTL LDVLRTCTVF MDTDSGKRVK VVCRYQQYRA
AHRIVERLRT GKTSEERSGV VWHTQGSGKS LTMVFVARML RASQDLADFK ILLVNDRVDL
EDQLAATAKL IGGKVNVIES TAALREHLST DTSDINMVMV HKFMERAEAL PTMVAEALAA
YRPPPSGATF GVVNPSERIL LMIDEAHRTQ GSDLGENIFE AFPNATRIAF TGTPLISEQH
GSKRTVKRFG EYIDTYKLMD AVHDGATLQI LYEGRTADTA LKDKHGFDTK FEDLFKNRSE
EELLVIKKKY GASGDILEAE QRIAAIARDL VTHYVDNILP DGFKAQVVCH SKLAAIRYQK
SIREALAERL DVEKLKQKPD TELIRRIAFL KAVVVVSADA TNELAAITEA RKEAKRWNAV
ENFCKPFDLD DPDKDLTGIA FLIVCDMLLT GFDAPVEQVM YIDKRLREHN LLQAIARVNR
VTKNKHRGFI VDYIGLANHL MEALSIYSDE DAEDIQQGLK NRLTELPILE ERYQRLLQHF
RAAGVGEIEA FVKGELATPE SDVAVVHAAV GAMQDIKRRA DFEVYLKKYL QSLNLILPHA
SGHPYRGPAR RFGYLLRMVK ERYKDDSLDI SDAGEKVKAL INEHLIDLGI NPKIPPIELL
SDDFISNVQK HSQGNPEAKA SEMEHAIRKH CTIHFDEDPA FYKRLSEKLE KLIQEHKNQW
EVLAEGYEQL RSEALAGRTD AEEGLTREAT TFYDYVVQLA FENGEVPGNH RHQLKRLMAG
IVEMLQGTIG IIDFWKKPIE VKKLRGNIDT EILLTEIPQL IDKHERIAVE IVKLAEKRHQ
ELTR
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