| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_4202 |
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| Symbol | |
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| ID | 8431216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | - |
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| Start bp | 4380162 |
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| End bp | 4383266 |
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| Gene Length | 3105 bp |
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| Protein Length | 1034 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645036395 |
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| Product | type I site-specific deoxyribonuclease, HsdR family |
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| Protein accession | YP_003193493 |
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| Protein GI | 258517271 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACC ATACCATATT TGACGAACGC CCTGAAAGTC AGGAGAGGGC AATTAAAGTA
TTGGAAAAGT TAGGCTATCA GTATGTACCC CGGTCACGGG CAGAAATTTT TCGAGGACGG
CTTTCTCATG TTTTATTTCC TGATGTTTTG CGAGAGTTTA TGCACCGGCA GTCTTTCGTT
TATAGAGGAA AGCAAACGCC TTTTTCCGAA CGTTCTATCG GCAAGGCCAT TAAGGATATC
GACGTGCCGC TTATTTCCGG GTTGATGTCG GCCGGCAAAA ACATCTATGA TATGCTTATT
TCCGGCAACA GCTATGAGGA GGAATTATTT GATGGAGGCC GTCAGTCTTT TGATCTAAAG
TTTATTGACT GGGAACATCC GGAAAACAAT CTATGGCAGG TGACAGATGA ATTTTCAGTG
GAGCGGGCGG ATGGCAAATA TGTGTGGCCG GATATAGTGC TGCTTGTCAA TGGTCTTCCT
CTGGTGGTGA TCGAGTGCAA AAAATCCGGT ATTGATGTGG AAAAAGGAGT TGCTCAAAAT
ACACGCAACT GGCAACCCGA CTATATTCCC CATCTGTTTA AATATGCGCA AATCATTATG
GCCATGAATC TAAACACTGT AAAATATGGA ACTTGTGGTA CGACTGCTGA GCATTTTAGC
GTCTGGCGGG AAAAAAATTA TCAATGGCAG CAGGAAAAAT GCAGCAATGT CAGCCCTGAC
GGCAAAGTCA CTGCACAGGA CAGAACTATT GTTTCCATAC TCTCCAAAGA GAGATTGCTG
GAATTGATGC GTTATTTTAT CCTATATGAC AATAATGTCA AGAAAATTGC CCGCTATCAA
CAGTTTTTTG CTGTACAGGC AACCATGAAA CGTATAAAGG GGGAAGATAA CAAAGGTGCA
AGGGGTGGTG TGATCTGGCA CAGCCAGGGC AGCGGTAAAT CTCTCACCAT GGTGATGCTG
GTTAAAAAAA TAATAGCTGA CCCGGATATC GGAAATCCTC GTTTTGTGCT TGTCAATGAT
CGGGTCAATC TGGATAAGCA GCTGAGGGAC AACTTTGCCA GAACTCAGCT CAGACCGGTC
CGGGCCAGTA CAGGCAAGGG TCTGATTGAT TTGTTAAGGG ACAAAAGTGA AACTATAATT
ACTACTCTTG TACATAAATT TTATACAGCA GCAAAAAAGA GAGTCAAGAT TGAAGATGAC
AATATTTTTT TGCTGGTGGA CGAAAGCCAT CGCTCACACT CAAGTGAACT TCATGACTTT
ATGATTGATG TTCTGCCTAA TGCTATAAAA ATAGGTTTTA CCGGCACGCC GCTGCTTAAG
AAACACAAAT TAAATACCTA TGCGCAGTTT GGACCGCTTA TTGACAGTTA CCCTATTACC
AGGGCTGTTG AAGACGGTGT TATTGTTCCT CTTGTCTATG AGGGCAGGAT TATTCCACAA
GATGTGACGA GTGAGAAGAT TGATGATTAT CTCAAATATA TTATTGCGCC GCTGAATCAC
GAGCGGCAGG AAGATATGAA GCGCAAATGG AGCCGTCTTT TACCTCTGGC TCAAACTCGT
CAACGCATAG ACATGGTGGC TTTTGACATT CATGAGCACT TTATAAGTTA TGCCGGGCCT
AAGGGATTCA AGGCTATGAT TGCAGCATCA TCTCGTCCGG CAGCTATTGA CCTGCATAGA
TCGATAAAGA AACTTGGCGG GATAAAAACA GCGGTGGTGA TATCGCCCGA AAATGTTAAA
GAAGGTGATG AGCTTACCGG TGAAAATAAA GAAAAAATAA GATCCTTTTT CAAGGAAGAG
GTGGAGCCTC TCTTTGGACA TAACTATGAG GAATATGGTG AATGGGCTAA AAACAGCTTC
ATTGGTGGTG AAGATGTGGA TATGCTTATT GTCAAGGATA TGTTGCTAAC CGGCTTTGAC
GCGCCGGTTG CTGCTGTGCT GTATGTGGAT AAACCCATGA GGGAGCATGC TTTGTTGCAG
GCCCTTGCCC GCGTTAACCG CGTTTATCCG GGCAAAGACT TCGGGCTCAT CGTGGATTAT
TGGGGTATTT TTAGCAAGCT TAATACTGCC ATGGATATGT ATGCGGATGA GAAATCCGGT
ATGGACGGAT ATGATCAGGC GGATATTGAA AATGCTATTC TTGGTGCCGT TGATCAAAAA
CGCAAGCTGG AAAGGGCGCA CAGTGAATTG CGGCTTGTTT TTGAGGGAAA GGATTTTGAT
CGAAACAGTT CCGATGGTTG GCAAAGTGCA TTGGCAGATA GTGACTTGAG AAAAGTTTTT
TATGAAAAGC TTTCAGTATT TTCCCGCCTG CTGGATTTGG CCATGGGAAG CTATGCTTTC
TATAGCGCCA TTGGTTATGA CCGTATTCAG CAATACAAGC GGGATTTGCT TCATTTCCAA
AAGCTTCGCG GGGCGGTCTT GCTTCGTTAT AATGAAAAAG TAGATTTTAG TAAATATGAA
GACGGTATTC GCAGCCTGTT GAATAATTTT GTGCTTTCCG AACCAAGCCG GATTATTGTT
GAACCTGTTT CTATTCATGA TACCGAAGGG ATGAAAGCGC AGCTTGAGAA GCTGGATAGC
AAAGCCGCCA AAGGGGATGC CATTCGTACG CGTATGGACA AAGAGCTGGA AACCTGTCGT
TATGATGACC CTTTACTATA TAAGAGGTTT TTTGCGCAGG TCCAAGAAAC CCTGGAAGTA
TACAAAGCCT CAAGAAATGA TGATGTTTAT TTCTTTGAAA TGGAGAAAAT GGCGGATGAT
TTTAAAAAAG GCTATACCGG CCATCACTAC CCTGCGTGTA TTGATAATGA CAGTGATGCG
AAAGCTTTTT ATGGCATAAT TCAGAGTATC ATTGCTGAAG TCATATATGA TATAACGCCG
GAAATAGATG AGGGCATGGG GCAACTGGCC ATTGAGGTCA AAAATGCCAT TTGCAGTCGT
GCAAAGGTGG ATTGGCGTCA TAATGTTGCT GTGCACAAAG ACATGGAACA AGCTCTTGAT
GATCTGATTT GGGATTTTGC CGAGCAATAT CAAATAAAAT TATCCGTTGA AAAAATCGAT
CTCATGCTGG AAGAACTAAG AAAAACAGCA ATTAGCAGGT ATTAG
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| Protein sequence | MPDHTIFDER PESQERAIKV LEKLGYQYVP RSRAEIFRGR LSHVLFPDVL REFMHRQSFV
YRGKQTPFSE RSIGKAIKDI DVPLISGLMS AGKNIYDMLI SGNSYEEELF DGGRQSFDLK
FIDWEHPENN LWQVTDEFSV ERADGKYVWP DIVLLVNGLP LVVIECKKSG IDVEKGVAQN
TRNWQPDYIP HLFKYAQIIM AMNLNTVKYG TCGTTAEHFS VWREKNYQWQ QEKCSNVSPD
GKVTAQDRTI VSILSKERLL ELMRYFILYD NNVKKIARYQ QFFAVQATMK RIKGEDNKGA
RGGVIWHSQG SGKSLTMVML VKKIIADPDI GNPRFVLVND RVNLDKQLRD NFARTQLRPV
RASTGKGLID LLRDKSETII TTLVHKFYTA AKKRVKIEDD NIFLLVDESH RSHSSELHDF
MIDVLPNAIK IGFTGTPLLK KHKLNTYAQF GPLIDSYPIT RAVEDGVIVP LVYEGRIIPQ
DVTSEKIDDY LKYIIAPLNH ERQEDMKRKW SRLLPLAQTR QRIDMVAFDI HEHFISYAGP
KGFKAMIAAS SRPAAIDLHR SIKKLGGIKT AVVISPENVK EGDELTGENK EKIRSFFKEE
VEPLFGHNYE EYGEWAKNSF IGGEDVDMLI VKDMLLTGFD APVAAVLYVD KPMREHALLQ
ALARVNRVYP GKDFGLIVDY WGIFSKLNTA MDMYADEKSG MDGYDQADIE NAILGAVDQK
RKLERAHSEL RLVFEGKDFD RNSSDGWQSA LADSDLRKVF YEKLSVFSRL LDLAMGSYAF
YSAIGYDRIQ QYKRDLLHFQ KLRGAVLLRY NEKVDFSKYE DGIRSLLNNF VLSEPSRIIV
EPVSIHDTEG MKAQLEKLDS KAAKGDAIRT RMDKELETCR YDDPLLYKRF FAQVQETLEV
YKASRNDDVY FFEMEKMADD FKKGYTGHHY PACIDNDSDA KAFYGIIQSI IAEVIYDITP
EIDEGMGQLA IEVKNAICSR AKVDWRHNVA VHKDMEQALD DLIWDFAEQY QIKLSVEKID
LMLEELRKTA ISRY
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