| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2197 |
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| Symbol | |
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| ID | 5372799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2619809 |
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| End bp | 2623000 |
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| Gene Length | 3192 bp |
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| Protein Length | 1063 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640830410 |
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| Product | HsdR family type I site-specific deoxyribonuclease |
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| Protein accession | YP_001366400 |
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| Protein GI | 153000719 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.511328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAG TAGGCCAAAA GGAACGTGCC ACCCAAAACC GTGTGGTCAA ATTCTTTCAA
AATGAATTGG GTTATCGCTA TTTAGGTGAT TGGAAGGATA GACAAGATAA CCGCAATGTT
GAAAGCCATA TATTAGCTAA TTGGCTGGCC GATCGCGGCG TGTCAGAGCT ACTGATCAAT
CGTGCATTAC GTAAACTGGA TATTGCAACT GCGTTGGGTG AAGGCAAAAA ACTCTATGAT
GCGAATAAAG AGGTGTATCG CTTATTACGT TATGGCGTGA AAGAGAAACA GGGCGCGGGT
GAGCAAAATC AAACGGTTTG GCTGATTGAT TGGCAACACC CTGAAGCGAA TGATTTTGCT
ATTGCTGAAG AAGTGACTGT GAAGGGGGAT CAGCTATCGC CAAAAACCAA ACGTCCCGAT
CTGGTACTGT ATGTCAATGG TATTGCCCTT GGGGTGATTG AGCTAAAGCG CTCGTCTGTT
TCTGTGAGTG AAGGGATACG CCAGAATCTC GATAATCAAA AGAAAGACTT TATCCGTAAT
TTTTTTACGA CCATGCAGCT TGTAATGGCA GGCAATGATA CCCAAGGTGT TCGCTACGGC
ACGATTGAAA CCACCGAGAA ATACTATCTT GAGTGGAAAG AAAATGTGGA ATGGAAAGAT
CCTGCCATTA TCACGAGTGT TGATAAAGCG GAAAATACGA GCACTATACT GGATTCGCAC
TTAGGTCAGC TTTGTAATAA GTCGCGGTTT TTACAACTGA TCCACGACTT TATTGTATTT
GATTCTGGGG TTAAAAAGAC CTGTCGTCAT AATCAATACT TTGGTATTCA AGCCACCAGA
AAACACATTA CGTCACGCCA TGGTGGAATC ATTTGGCACA CCCAAGGTTC AGGCAAGAGC
TTGACCATGG TGTGGTTGGC TAAGTGGATC CGTGAAAATG TCGCCGATTC TCGGGTATTG
ATCATTACAG ACAGAACCGA ACTCGACGAG CAGATTGAAA AAGTCTTTAT CGGTGTCGAT
GAATTTATTT ATCGCACTAC AAGTGGCAGT GATTTAGTCG CCAACCTGAA TAAGCCCAAT
CCTTGGTTAT TATGCTCATT GGTACATAAA TTTGGCCGCA ATGGCGAAGC GCTAGATGAC
AATGCTGGAG TGGGAGGCGA TGACGAAGCA ACTGACGATT TTATTACAGC AATGACCCAT
AACTTGCCAA AAGACTTTAG CGTTAAAGGC AACTTGTTTG TTTTTGTTGA CGAGTGTCAT
CGTACTCAGT CTGGCAAATT GCATACGGCA ATGAAATGCC TGCTTAGCGG TAAAGAGGGG
CCTGAAGCCA TGTTTATCGG TTTTACGGGC ACGCCATTAA TGAAAAAGGA TAAGAAAAAA
TCCTTAGAAA TCTTCGGCCC TTATATTCAT ACCTACAAGT TTAATGAAGC AGTGCTTGAT
GGTGTGGTGC TGGATTTACG CTACGAAGCC AGAGATATCG ATCAGCATTT AACATCAGAG
AAAAAAATTG ATCAGTGGTT TGAGGCTAAA ACCAAGGGAT TGTCTCACCT GGCGAAAATG
CAGCTAAAAC AAAAATGGGG CACGATGCAA AAAGTGCTCT CCAGTAAATC ACGGCTCGAA
AAAATCGTTA GTGATATCTT AATGGATATG GAACTTAAAC CACGATTGAT GGACGGCCGA
GGCAATGCCA TGTTGGTGTG TGCTAGCGTG CATCAAGCCT GTGTTGTCTA TGATCTGTTT
AGTAAAACTG ACTTACATGA CAAGTGCGCG ATTGTCACCA GCTATCAGCC TGTTGCCGGT
TCAATTAAGG GGGAAGAATC AGGAGAAGGA TTAACAGAAA AACTGTTTAA GTACGATGTA
TACCGAAAAA TGCTAGCGAG TTACTTCGAA CAATCTGAAG ATGAAGCGGC TAAAAGAGTC
GAAGAGTTTG AGAAAACAGT CAAAAAACGC TTTATCGATG AGCCTGGTCA AATGCGTTTG
TTGATTGTGG TTGATAAGCT ACTGACGGGG TTCGATGCAC CTTCTGCAAC ATATTTATAC
ATTGATAAGT CTATGGCCGA CCATAACTTA TTCCAAGCAA TTTGTCGGGT GAATCGACTC
GATGGTGAGG ATAAAGAATA TGGCTATATC ATTGACTATA AAGATTTATT TAGGTCATTA
GACAAAGCAT TAAAAGACTA CACCGCCGAA GCGTTTGACG CTTATGATGC TGAAGATGTT
GCTGGTTTAT TGAAGGACAG ATTAGTGCAG GCGAGGGAAG ATCTCGATAA TGCACTGGAG
ACTGTACGGG CGATTTGCGA ACCCGTTGAA ACACCTCGTC ATACTCAAGA TTTTATTCAT
TATTTTTGTG GCAAATCTGG TGTTAGCTAT GATGCGGACA CTAGAAGCGA ACAAGAGACA
CTGCGCCTGA CACTCTATAC TGCGGTCGCT AAGCTGCTCC GCGCTTACGC CAATTTAGCC
AATGAAATGG AGCAAGCGGG TTACACTACA GAAGAATCAA TCCAGATCAA AGCTGAAGTC
GTGTTCTATG AGAAAGTGCG CGATGAAGTG AAGCTTGCCA GCGGTGATTT ACTCGAAATG
AAGCGCTTTG AACCGGCAAT GCGTCACTTG CTCGATATGT ATATTCGAGC TGATGACAGC
GAAGTGTTAA TGGATTTTGA AGACTTCGGG CTAATCGATT TAGTGATCAA TAACAACGGG
GAGGGCATGG ATAAACTCCC AAAAGGATTA CGCGATAACG AAGATGCTAT GGCGGAAGCC
ATTGAGAATA ACGTCCGTAA AACCATAGTG GATGAAAATC CAGTTAACCC TAAATATTTT
GACCAGATGT CGACATTGCT CGAAGAGCTA ATAAAACAGC GCCGAGAAAA AGCACTGAAT
TATCAAGAGT ATTTAGAAAA AATTCGTGAA CTGGCCAAAA AAGTGGTTAA TCCTGTTGGC
GCGAGTCAAT CTAGCTATCC GGATTCTATT GATACCGCAG CTAAACAAGC TATTTTCGAT
AACTTTGGTA ATGATGAAGT ATTAACAACC AAAATAGATA CAGCGGTTCG CTTTACTAAA
AGAGCGGATT GGCTAGGTGA CCGATTTAAG GAACGTGAAA TTGCTAATGC AATCCGTGAA
GAAACTGCCA GTTATGGCAT TGATGTGGCT GCAATAATGG AGCTTATTAA AGCACAAAAG
GAATACCATT AA
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| Protein sequence | MSTVGQKERA TQNRVVKFFQ NELGYRYLGD WKDRQDNRNV ESHILANWLA DRGVSELLIN
RALRKLDIAT ALGEGKKLYD ANKEVYRLLR YGVKEKQGAG EQNQTVWLID WQHPEANDFA
IAEEVTVKGD QLSPKTKRPD LVLYVNGIAL GVIELKRSSV SVSEGIRQNL DNQKKDFIRN
FFTTMQLVMA GNDTQGVRYG TIETTEKYYL EWKENVEWKD PAIITSVDKA ENTSTILDSH
LGQLCNKSRF LQLIHDFIVF DSGVKKTCRH NQYFGIQATR KHITSRHGGI IWHTQGSGKS
LTMVWLAKWI RENVADSRVL IITDRTELDE QIEKVFIGVD EFIYRTTSGS DLVANLNKPN
PWLLCSLVHK FGRNGEALDD NAGVGGDDEA TDDFITAMTH NLPKDFSVKG NLFVFVDECH
RTQSGKLHTA MKCLLSGKEG PEAMFIGFTG TPLMKKDKKK SLEIFGPYIH TYKFNEAVLD
GVVLDLRYEA RDIDQHLTSE KKIDQWFEAK TKGLSHLAKM QLKQKWGTMQ KVLSSKSRLE
KIVSDILMDM ELKPRLMDGR GNAMLVCASV HQACVVYDLF SKTDLHDKCA IVTSYQPVAG
SIKGEESGEG LTEKLFKYDV YRKMLASYFE QSEDEAAKRV EEFEKTVKKR FIDEPGQMRL
LIVVDKLLTG FDAPSATYLY IDKSMADHNL FQAICRVNRL DGEDKEYGYI IDYKDLFRSL
DKALKDYTAE AFDAYDAEDV AGLLKDRLVQ AREDLDNALE TVRAICEPVE TPRHTQDFIH
YFCGKSGVSY DADTRSEQET LRLTLYTAVA KLLRAYANLA NEMEQAGYTT EESIQIKAEV
VFYEKVRDEV KLASGDLLEM KRFEPAMRHL LDMYIRADDS EVLMDFEDFG LIDLVINNNG
EGMDKLPKGL RDNEDAMAEA IENNVRKTIV DENPVNPKYF DQMSTLLEEL IKQRREKALN
YQEYLEKIRE LAKKVVNPVG ASQSSYPDSI DTAAKQAIFD NFGNDEVLTT KIDTAVRFTK
RADWLGDRFK EREIANAIRE ETASYGIDVA AIMELIKAQK EYH
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