| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1863 |
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| Symbol | |
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| ID | 7382224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1985201 |
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| End bp | 1987768 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643655180 |
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| Product | type I site-specific deoxyribonuclease, HsdR family |
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| Protein accession | YP_002553320 |
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| Protein GI | 222111056 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAG ACCAACTGGA AAAGGAAACC CTGGGCTGGC TGGCTGATGT TGGCTACTCA
CTCCACAATG GGCTGGATAT CGCCCAAGAC GGCATCAACC CCCAGCGTGC CGATTACCGC
CAAGTCGTCC TATCGTTTCG ACTGCGTGAA GCCATCCAGC GCCTGAATCC GCACATCCCG
ACGGCAGCCC GTGAAGACGC CCTGCACCGG GTGCTGGATT TGGGTATCCC GTCCCTGCTG
TCGGCCAACC GGGCCTTCCA CAAGCTGCTG GTCGGTGGAG TGCCGGTGCA GTACCAGAAG
GAAGGCGAAA CCCGTGGTGA CTTTGTTCGC TTGGTTGATT GGTCGGAGGC GTCGCGCAAC
GAGTTCTGGG CGGTCAATCA GTTCACCATC AAGGGGCCGC ACCACACGCG CCGCCCCGAC
ATCATCCTGT TCGTCAACGG CCTGCCGCTG GTCCTGCTGG AGCTAAAGAA CCCTGCTGAC
CAGGCCGCCG ACATCTGGAA AGCCTATGAC CAGATTCAGA CCTACAAGGA GCACATACCG
GACGTATTCC AGTACAACGA GGTGCTAGTC ATCTCGGATG GCACCGAGGC GCGGCTCGGT
TCCCTGTCAG CCAATGCCGA GCGCTTCATG CAATGGCGCA CCATCGACGG CGTGAACCTG
GACCCGCTGG GGGAGTTCAA CGAGCTGGAA ACGCTGGTGC GCGGTGCCCT GGCACCCCAG
TACCTGCTGG ACTACCTGCG CTACTTCGTC CTGTTCGAAG ACGACGGCAG CCTTGTTAAG
AAAATTGCTG GCTACCACCA GTTTCATGCT GTGCGCTCTG CCATCGCGCA TGTGGTGGCC
GCCTCCCGGC CCGACAGTGC TGCCAACCAG CGAGGGAAGG GCGGGGTGGT GTGGCACACC
CAAGGCAGCG GCAAGAGCAT CACCATGACA TGCTTTGCCG CCCGGGTGAT GCAGGAGCCC
GCGATGGCCA ATCCCACCAT CGTCGTCATC ACCGACCGCA ACGACCTGGA CGGGCAACTG
TTTGGAGTGT TCAGCCTGGC GCAAGACCTG CTGCGCGAGC AGCCCGCCCA GGCCAGCACC
CGGCAGCAAT TGCGGCAACT GCTTAGCAAC CGGCCCTCGG GCGGCATTGT GTTTGCCACC
ATCCAGAAGT TCATGCCGGG CGAGGATGAG GACATGTTCC CTGTGCTCTC AGAGCGCCAC
AACATCGTGG TGATTGCTGA CGAAGCCCAC CGCACCCAGT ACGGCTTCGA GGCCAAACTC
AAGACCATCA AGAACAAGGG TGCCAGTGCC GCCAAGGCGC TGGTCCTGGC CGACGGCGAG
ACCTCGGGAG CAGCCGTTAC CGCCGACTTT GCGGAGCCGG AGTACCTGAC GAAGTACCAG
GTTGGCTATG CCCAGCACCT GCGCGATGCC TTGCCACACG CCACCTTCGT GGCCTTTACC
GGCACGCCCG TCAGCAGTAC CGACCGCGAC ACCCGTGCTG TTTTTGGTGA CTACATCTCG
GTCTACGACA TGCAGCAGGC CAAAGAAGAC GGGGCCACGG TCGCCATCTA TTACGAAAGC
CGGCTGGCCA AGCTTCGACT CAAGGAAGAG GACCTGTCCT TTCTTGATGA TGAAGTTGAC
GAGTTGGCCG AGGACGAAGA AGAAAGTACC CAGGCGCAAC TCAAAAGCCG CTGGGCTGCG
CTGGAAAAGG TGGTGGGCGC CACGCCCCGC GTGGCCAGCG TGGCCGCTGA CCTGGTGGCG
CACTTCGAGG AGCGCAACAA GACCCAGGAC GGCAAGGCCA TGGTGGTCGC CATGAGCCGG
GACATCTGCG TGCACCTGTA CAACGAAATC GTGAAGCTAC GTCCCGACTG GCACGACAGC
GACCCAGAAA AAGGTGCCAT CAAGATTGTG ATGACTGGTA GCGCCAGCGA CAAAGCCTTG
CTGCGCCCCC ACATCTACAG CGCCCAGGTC AAGAAACGCC TGGAAAAACG TTTCAAAGAC
CCCACGGACC CGTTGCGCCT GGTCATCGTG CGCGATATGT GGCTCACCGG CTTCGATGCC
CCTTGCGTTC ACACCATGTA TGTGGACAAG CCCATGAAGG GGCACAACCT GATGCAGGCG
ATTGCCCGCG TCAACCGTGT TTTCAAGGAC AAGCAGGGCG GCCTGGTCGT GGACTATATC
GGCATCGGCA ATGAACTGAA GGCCGCCATG AAGGAGTACA CCGCCAGCCA AGGCCGCGGC
AAGCCTACCG TGGATGCCCA CGAGGCCCTG TCGGTGCTAC TGGAGAAGAT GGACGTGCTG
CGCGCCATGC TGCACGGGTA TGACTACTCA GGCTTCCTCA CAGGTGGCCA CAAGACCCTG
GCGGGTGCAG CCAACCACGT TCTGGGCATC AAGTCCGAGG GCAAGGACAG CAAGCGTGAC
GGCAAAAAGC GCTTTGCTGA CAGTGCGCTG GCCATGAGCA AGGCCTTCAG CCTGTGCTGC
ACCCTGGACG AAGCCAAGGC CCTACGCGAG GAGGTGCCAG CACGCGACTC TTCAAAGGCG
TGCTTCCAGG TGCAAGCTGT CCTGAACTGT GGGCGCTTGA AACTGTGA
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| Protein sequence | MTEDQLEKET LGWLADVGYS LHNGLDIAQD GINPQRADYR QVVLSFRLRE AIQRLNPHIP
TAAREDALHR VLDLGIPSLL SANRAFHKLL VGGVPVQYQK EGETRGDFVR LVDWSEASRN
EFWAVNQFTI KGPHHTRRPD IILFVNGLPL VLLELKNPAD QAADIWKAYD QIQTYKEHIP
DVFQYNEVLV ISDGTEARLG SLSANAERFM QWRTIDGVNL DPLGEFNELE TLVRGALAPQ
YLLDYLRYFV LFEDDGSLVK KIAGYHQFHA VRSAIAHVVA ASRPDSAANQ RGKGGVVWHT
QGSGKSITMT CFAARVMQEP AMANPTIVVI TDRNDLDGQL FGVFSLAQDL LREQPAQAST
RQQLRQLLSN RPSGGIVFAT IQKFMPGEDE DMFPVLSERH NIVVIADEAH RTQYGFEAKL
KTIKNKGASA AKALVLADGE TSGAAVTADF AEPEYLTKYQ VGYAQHLRDA LPHATFVAFT
GTPVSSTDRD TRAVFGDYIS VYDMQQAKED GATVAIYYES RLAKLRLKEE DLSFLDDEVD
ELAEDEEEST QAQLKSRWAA LEKVVGATPR VASVAADLVA HFEERNKTQD GKAMVVAMSR
DICVHLYNEI VKLRPDWHDS DPEKGAIKIV MTGSASDKAL LRPHIYSAQV KKRLEKRFKD
PTDPLRLVIV RDMWLTGFDA PCVHTMYVDK PMKGHNLMQA IARVNRVFKD KQGGLVVDYI
GIGNELKAAM KEYTASQGRG KPTVDAHEAL SVLLEKMDVL RAMLHGYDYS GFLTGGHKTL
AGAANHVLGI KSEGKDSKRD GKKRFADSAL AMSKAFSLCC TLDEAKALRE EVPARDSSKA
CFQVQAVLNC GRLKL
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