| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_2398 |
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| Symbol | |
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| ID | 6459042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011061 |
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| Strand | - |
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| Start bp | 55595 |
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| End bp | 58642 |
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| Gene Length | 3048 bp |
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| Protein Length | 1015 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642729126 |
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| Product | type I site-specific deoxyribonuclease, HsdR family |
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| Protein accession | YP_002019740 |
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| Protein GI | 194335174 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.632036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCTCA AGGAAAGTGA TATAGAGCAG AAACTAATCG CAAAGCTCGA GGAGCTGAAA
TATACCTATC GCTCCGACAT CCGCGACAAG GTCACGCTGG AGCAAAACTT CCGAGAGAAG
TTCGAGGCGC TGAACCGTGT CCATTTGACT GACGCTGAAT TTGCGCGCTT GCGTGATGAG
ATCATCAATG CTGATGTGTT TCAGGCAGCT AAGACCTTGC GTGAATACGG GCACCTCCAG
CGGGAAGATG GTACTCCGCT GGACTACATG CTTGTCAACA TCAGGGACTG GTGCAAAAAC
GACTTTGAAG TCATCAACCA GCTACGCATC AACACTGATA ACAGCCATCA CCGCTATGAT
GTCATTCTAT TGATCAATGG CCTGCCTGTT GTGCAGATAG AGTTGAAAAC CATCGGGATC
AATCCACGCC GTGCGATGGA GCAGATTGTT GACTATAAAA ACGATCCCGG TAACGGTTAT
ACCAATACGC TGCTCTGTTT CATGCAACTG TTTATTGTCA GCAACCGAAG CAATACCTAT
TACTTTGCCA ACAACCACAG CCAGCACTTT GCCTTCAATG CTGATGAGCG TTTTTTGCCT
ATCTACCAGC TGGCCAGTGA AGACAATATA AAGATCACCC ATCTGGATGA CTTTGCAGAT
ATTTTCTTTG CCAAATGCAC ATTAGGCCAA TTGATTAGCC GTTATATGGT GCTTGTTGTC
AGCGAGCAAA AGTTGATGAT CATGCGGCCG TATCAAATCT ATGCGGTCAA GGCCATTGTC
GATTGTATCC ACCAGAACCG GGGCAATGGT TATATCTGGC ATACCACTGG AAGTGGCAAG
ACGCTGACTT CATTCAAGGC ATCCACCCTG CTCAAGGATA ATCCTGATAT TGAAAAATGC
CTGTTTGTGG TTGATCGCAA GGACCTCGAT CGGCAAACCC GTGAGGAATT CAACAAGTTT
CAGGAAGGTT GTGTAGAGGA AAATACCAAC ACCGAGACCC TGGTTCGCCG ACTGCTCTCA
GAAGACTACG CTGACAAGGT CATCGTTACC ACCATCCAGA AGCTTGGACT TGCATTGGAT
GAAAACAGCA GGCGCAACCA GCAGCACAAA GAGAAGGGGA AGCTTACGTA TAAAGAGCGA
CTTGAGCCAT TGCGCGACAA GCGTATTGTT TTCATCTTCG ACGAATGTCA CCGTTCCCAG
TTTGGTGAAA ACCACCGGGC CATCAAGACC TTCTTTCCCA AAGCGCAACT CTTTGGTTTT
ACCGGTACCC CTATATTTCA AGACAATGCC TCCTACAAGA AGATCGATGG CACAGTAGGG
TCATACCGTA CCACCAAAGA CATCTTTGAA AAAGAGTTGC ACGCTTATAC TATTACCCAT
GCTATTGACG ATCGAAACGT GCTGCGTTTT CATATCGACT ATTTCAAGCC TGAAACCGCG
CAAACCAGAG CGGAAGAAGC TGGTAAGGTT AAAAAGCAGA ATAAGATAAA GTCTGGTGAG
GCTGTTACAC AGCAGGCTGT GGTCGAGGCG ATTCTGGACA AACATAATGC GGCAACAAAC
CAACGCCGTT TCAATGCCTT GCTTGCTACC GCTTCAATTA ACCATGCGAT TGACTATTAC
GAACTGTTCA AAGAGTTGCA GGCTGAACAT CAGGAACAAG ATCCGACGTT CAAGCCACTG
AATATCGCAT GTGTGTTTTC ACCTCCAGCT GAAGGCAATA AAGACATCAA GCAATTGCAA
GAAGACCTGC CACAGGAAAA GATTGACAAT CAGCAGGACC CGGAAAAAAA GAAATCTGCG
CTTAAAGCTA TCATTGCCGA TTACAACAAG AACTACGGAA CCAACCACAA TATCAACGAA
TTCGATCTTT ACTACCAGGA TGTGCAGAAG CGCATCAAGG ACCAGAAATA TTCCAACAGA
GATTATCCGC ATACAAACAA GATCGATATC ACTATCGTTG TAGACATGCT GCTTACCGGG
TTTGACTCAC AGTATCTCAA TACTCTGTAT GTAGATAAAA ACCTCAAACA CCATGGGCTG
ATTCAGGCGT TTTCACGTAC AAACCGCATA CTTAACGACA CAAAGCCCTA TGGCAATATT
CTCGACTTTC GTGGGCAGCA AACGGCGGTT GATAATGCCA TCGCACTCTT TTCCGGTGAA
GACAACAGCC GTGCCAGGGA GATCTGGCTG GTTGATCCGG CCCCTGAGAT GGTGAAAAAA
CTCGGGAGTG CAGTTACTGA GCTGCAAACC TTCATGGAAA CCCAAGGCTT GCCATGCACG
CCGGAAGCAG TTGCCAATCT CAAGGGCGAC AGCGCCCGAG CCGAGTTCAT CAACCGCTTC
AAGGAGGTCC AGCGCTTCAA AACCCAGCTT GACCAATACA CCGATCTTGA CGAGGAGCAA
CAACAAGCCA TCGAGCAAAT TCTCCCGGAA GAACAAGCGC GAGGCTTCAA GGGAGCGTAT
CTTGAAACAG CCCAGCGGCT CAAAGCTCAG CAAGGCAAGG GTGGCGTTGA GGCCGGTGAT
GAGCAGGCAA GCATCGATCA GCTCGATTTT GAGTTTGTGC TTTTTTCCTC CGCACTGATC
GATTACGATT ACATCATGGG TCTCATTGCC CGATACAGCC AGAATAAACC GGGTAAGCAG
AACATGAGCC GTGAGCAGTT GGTGAACATG CTTTCAGCCA GCAGCAATCT CATGGATGAA
CGCCAAGATA TCATCGACTA CATCAACAGC CTGCAGGCAG GCGAAGGGCT GAGTGAGGAA
GCTATCCGAG ACGGTTATCA GGTTTTCAAA GCACAAAAAG CTGACAGTGA GCTCAGCTCG
ATGGCAGACA AGCACGGTGT AGAGACCGAG TCGCTGAAAA CCTTCGTCGA AGCCATTCTC
GATCGCATGA TCTTCGACGG CGAACAACTC AGCGACCTGT TCGAGCCGCT GGAGCTTGGC
TGGAAAGCAC GTAGCAAGGC CGAGCTGGCA CTCATGGAGG ATCTGGTGCC ATTTTTAAAA
AAACAGGCCC AAGGCCGCGA AATATCAGGA TTAGCAGCAT ATGAGTAA
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| Protein sequence | MTLKESDIEQ KLIAKLEELK YTYRSDIRDK VTLEQNFREK FEALNRVHLT DAEFARLRDE
IINADVFQAA KTLREYGHLQ REDGTPLDYM LVNIRDWCKN DFEVINQLRI NTDNSHHRYD
VILLINGLPV VQIELKTIGI NPRRAMEQIV DYKNDPGNGY TNTLLCFMQL FIVSNRSNTY
YFANNHSQHF AFNADERFLP IYQLASEDNI KITHLDDFAD IFFAKCTLGQ LISRYMVLVV
SEQKLMIMRP YQIYAVKAIV DCIHQNRGNG YIWHTTGSGK TLTSFKASTL LKDNPDIEKC
LFVVDRKDLD RQTREEFNKF QEGCVEENTN TETLVRRLLS EDYADKVIVT TIQKLGLALD
ENSRRNQQHK EKGKLTYKER LEPLRDKRIV FIFDECHRSQ FGENHRAIKT FFPKAQLFGF
TGTPIFQDNA SYKKIDGTVG SYRTTKDIFE KELHAYTITH AIDDRNVLRF HIDYFKPETA
QTRAEEAGKV KKQNKIKSGE AVTQQAVVEA ILDKHNAATN QRRFNALLAT ASINHAIDYY
ELFKELQAEH QEQDPTFKPL NIACVFSPPA EGNKDIKQLQ EDLPQEKIDN QQDPEKKKSA
LKAIIADYNK NYGTNHNINE FDLYYQDVQK RIKDQKYSNR DYPHTNKIDI TIVVDMLLTG
FDSQYLNTLY VDKNLKHHGL IQAFSRTNRI LNDTKPYGNI LDFRGQQTAV DNAIALFSGE
DNSRAREIWL VDPAPEMVKK LGSAVTELQT FMETQGLPCT PEAVANLKGD SARAEFINRF
KEVQRFKTQL DQYTDLDEEQ QQAIEQILPE EQARGFKGAY LETAQRLKAQ QGKGGVEAGD
EQASIDQLDF EFVLFSSALI DYDYIMGLIA RYSQNKPGKQ NMSREQLVNM LSASSNLMDE
RQDIIDYINS LQAGEGLSEE AIRDGYQVFK AQKADSELSS MADKHGVETE SLKTFVEAIL
DRMIFDGEQL SDLFEPLELG WKARSKAELA LMEDLVPFLK KQAQGREISG LAAYE
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