| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0897 |
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| Symbol | |
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| ID | 3724155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 1057045 |
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| End bp | 1060929 |
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| Gene Length | 3885 bp |
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| Protein Length | 1294 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637750490 |
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| Product | HsdR-like, putative type I restriction deoxyribonuclease |
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| Protein accession | YP_356322 |
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| Protein GI | 77918507 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAAGC CTGCCTCCGA AGACAGCCTT TACGGCCTGC CGCGCAAAAC GGTTGAGGAT
ATCCGGAAAA TCTTTGCCCG CTTTCCGGAA ATCGACCGGG CCGTGCTCTA CGGTTCGCGC
GCCAAGGGGA CGCCTCGCCC CGGCTCCGAT ATCGACCTCA CCCTCCATCT CACCGACGGA
AAAACGCTGA AGTTTCTGCA CAAGGTCTCC AGTGCCCTTG AGGACCTGGG GTTGCCCTGG
GGGGTTGATC TTTCCCTGAT CGACTACATC GAAAACGAGA GCCTTCTCGA CCATATCGAG
CGGGTCGGCG TCGAGTTCTA CAGCGCGGCC GCCTACCGCG CCGAACAGGC GCAACTGCGC
AAGCGCAAGA CATACGAAAC CGAGGGCATT CAATCCGAAG CCCAACTCGA AGAGAACCTG
ATCAAACGGC TGCAGGGCCT CGGGTGGGAG CGTGTATCCA TCAACAACGC CGATGCGTTG
CGAACCAATC TCAAAAGGCA GCTCGAGATT CACAACGAGA AGGAACTCAA AGGACAGACG
CTGAGCGAGG CGGAATTTAC GCGGGTGCTC AGCCATCTCG ACAAGGGGAA CGTCTTCCAA
CGTGCCAAGA CCCTGCGCGA TCGCTTTTTG CTGCACCGCG ACGACGGTTC AACCTGTTAC
CTGCAGTTTC TGAACGTGGA ACACTGGTGC CGCAACCAGT ACCAGGTCAC CCGTCAGGTC
AGCCAGAACG GCAGGTATCT GAATCGTTAC GACGTGACCC TGCTGATCAA CGGCCTGCCG
CTAGCGCAGA TCGAACTGAA ACGGCGCGGC ATCGAGCTGA AGGAAGCCTT CAACCAGATC
AACCGTTACC AGCGCCATTC CTTCTGGGCG GAAAACGGCC TGTTCAACTA TGTGCAGCTG
TTCGTCATCT CCAACGGCAA GAACACCAAG TACTACGCCA ATAACCGCAA GCAGGAATTC
AAGCAGACCT TCTATTGGGC CAGGGAAAAC AACCAGCCGG TGACCCAGCT CGACCAATTT
GCCGATTTGT TCCTGGAAAA GTGCCATCTC TCCAAGATGA TCTGCAAATA CATCGTTTTG
CACGAATCGC ACAAGCTGCT GATGGTGTTG CGGCCCTATC AGTATTACGC GGTCGAGGCG
ATCGTCGAGC GGGTGAAAAA CGGGCGCAAA AACGGCTATA TCTGGCACAC CACCGGCTCC
GGGAAGACGC TGACCAGCTT CAAGGCGGCG CAGATCCTGA CGCATCTGCC CAAGGTGTAT
AAGGTGGTTT TTGTGGTCGA CCGCGCCGAT CTCGATTACC AGACCACCGA GGAGTTCAAT
TTTTTCAGTC CGGGCAGTGT CGATGGGACG GACAATACCA GAACCCTGGT GAAACAGATG
GCGGGCGATA ACTCGCTGAT CGTCACCACC ATTCAGAAGC TGAACACCGC CATCAAGAAG
CCGAGGCATG AAAAGGCCAT GGAGGCGCTC AGGGATAAGC GCGTGGTGTT CATCTTCGAC
GAGTGCCACC GTTCGCAGTT TGGCGATACG CACAAGAATA TCGTCAACTA TTTCACCAAG
GCGCAACTCT TCGGATTTAC CGGCACGCCG ATTTTTGCCG AGAATGCCAC CTTCAACAAA
CATGGCAAGC GCACCACCAA GAGCCTGTTT GAAAAATGTC TGCACAAGTA TGTCATCACC
GATGCCATCA GGGACGAAAA CGTCCTCAAG TTTTCGGTGG AATACTGGGG CAAGCTCAAA
CGCAGGGACG GCACCCTGAT AGACGAGCAG GTCGCGTCCA TCGACAAAAA AGCGTTTTTC
GAAAACGAAG CACGACTGAC CGGGGTTGTC GACTGGATCA TCGCCCATCA CAATCGTAAA
ACCCACAACC GCCGCTTCTC GGCCATCATG TGCGCAGGCA ATGTCGCGAC GCTGACCAGG
TATTACGATA TCTTCAAACG CAAGAAACAG GCCGGCGAGC ACGACCTGCG GGTGGTCAGT
GTGTTCACTT TTGACCCCAA CGAGGAAGAT CAGGACGCCA ACGGCCTGAT CGGCGAGCCC
GATTTCGATA TCCGCGTCGA TGCCCCGGAG AGCAGACACA GCCGCGAAAA GCTGGAAGAG
TATGTGGCCG ATTACAATGC CCTGTACCGC ACGCAGCATT CGGTCAGGGA CAGCAAGGCG
TTCTATACCT ATTACAAGGA TATCGCCAAG CGTTTCAAGG AGCGGGAGAA AGAAAGCTTC
AAGGACAAGG ACCGGGCCGA CATTCTGCTG GTGGTCAACA TGTTTCTCAC CGGCTTCGAC
GCCAAGAAGA TCAACACCCT CTACGTGGAC AAGAACCTGA AATATCACGG TCTGATCCAG
GCGTATTCCC GCACCAACCG TATCCTCGGC GAGCTTAAAT CGCAGGGAAA CATCGTCTGC
TTCCGCAATC TCAAAGAGAA CACCGACGAG GCGATCCGAC TTTTCTGCGA TACCGAGGCC
AGCGAAGATG TCCTGATGGA GCCTTACGAA GTGTATATGG AGCGCTTCAA TCAGGGCGTT
CGGCACCTGT TGGAGATCGC CGCAACGCCC GATGCGGTCA ATGGGCTGTT TACCGAGGAG
GAACAGCTGG CCTATGTCAA AGCGTTCCGT CAGTTGATCG TGACCCTGAA CAAGCTCAAA
CCCTTTAACG ATTTCAGCTG GAGCGACCTG GAGCTGACCG AACAGAGATT CGAGGACTAC
AAGAGCAAGT ATCTCGATAT TTACGATCGG ACCCATGCCT GGCAGGAGGG CGCGTCCATC
ATCGAGGAGA TCGACTTTCA GCTCGAACTG ATCCGGCGCG ACGAAGTGAA CGTCGGCTAT
ATCGTCAAGC TGCTGAGCGA CATTCAATAC CGCAAGCAGC AGACCGGTTC GGCACAACCC
GGCGCCGACT CCGTGCGGAC GGTGTTGGAA ATGCTGGGTC GAGAGGCGCA ACTGCGGAGC
AAGCGGGAGT TGATCGAGCG CTTCATTGCC GAATACATGC CGCAACTCAC GGCCGACCAG
GACCTGGAGG AAATGTTCAC CGGCTATTGG AATCGGGAAA AGCGCGTGGC GGTTAATGAT
CTTTGCCGAC GGGAAAGATT GGATAAAGAA GCGGTTTATC GCATGATGGA TGAATATCAT
TTTTCCGGCA AAGACCCTTT GCGCGAAACC GTGTTCTCGG CCCTGGAGTA CAAGCCCAAA
CTGATGGAAA GGAAAAAGGT CTACTCGCGG GTGTTGGGAG AGATGCAAGG CATTATTCAA
CGCTTTGACG AAGGGACCGG TTCGCTCGAA GTGCATGAGG AGAGTGCGGC TTACAATTCG
CGGCCGATCC ACGAGGTGGC GCACCGGATA GGCGACAAGG AACTTTTCTT CAGCGATGAG
ATAAACAGCA ACCGCAATGT CACGGAACTC GTTCGCTTCG GATTGACGGT GGATCGTCCC
TATCGCGAAC GGCTGGAGAG TTTGTCCGCA TATCCCCTTG CCGGAGAACT TCTGGCGCGT
GGCATCGTCA GCGACACCAT TCTGACGGAA TACTTCGGTT TAACCGCGGA ATTTGAGACG
GTTTTAAAAG CATACGATTT TCACTTTAGC GAAGCGGAAA ATTTCAGGGA CGGCAGTGTT
TTCTGGTCGC TTACCGAGGC GAGAGAGGGG AGCACCGTTC TTGAGTTTGC CCTGAATGCG
TATGGATATA CTCTCGTCAT CGGCGGTCCC GTTCTTGCGT TTCTTGCACT ATATGGTTCC
GCATCCGCGG GGCTCGAGAC GTTGCAGGAG CATATTCGAC AGCGCTTTGG AAAGAGTGGC
GAACAAAATG AACCTTCGGT GATTATCAAC AAGGATCTGG AGGCGGAGTT TAGAAAAATC
AAAGAGGAAC GAAATCGTTC TGTTCAGAAG ACCAATAAGC ACTGA
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| Protein sequence | MTKPASEDSL YGLPRKTVED IRKIFARFPE IDRAVLYGSR AKGTPRPGSD IDLTLHLTDG
KTLKFLHKVS SALEDLGLPW GVDLSLIDYI ENESLLDHIE RVGVEFYSAA AYRAEQAQLR
KRKTYETEGI QSEAQLEENL IKRLQGLGWE RVSINNADAL RTNLKRQLEI HNEKELKGQT
LSEAEFTRVL SHLDKGNVFQ RAKTLRDRFL LHRDDGSTCY LQFLNVEHWC RNQYQVTRQV
SQNGRYLNRY DVTLLINGLP LAQIELKRRG IELKEAFNQI NRYQRHSFWA ENGLFNYVQL
FVISNGKNTK YYANNRKQEF KQTFYWAREN NQPVTQLDQF ADLFLEKCHL SKMICKYIVL
HESHKLLMVL RPYQYYAVEA IVERVKNGRK NGYIWHTTGS GKTLTSFKAA QILTHLPKVY
KVVFVVDRAD LDYQTTEEFN FFSPGSVDGT DNTRTLVKQM AGDNSLIVTT IQKLNTAIKK
PRHEKAMEAL RDKRVVFIFD ECHRSQFGDT HKNIVNYFTK AQLFGFTGTP IFAENATFNK
HGKRTTKSLF EKCLHKYVIT DAIRDENVLK FSVEYWGKLK RRDGTLIDEQ VASIDKKAFF
ENEARLTGVV DWIIAHHNRK THNRRFSAIM CAGNVATLTR YYDIFKRKKQ AGEHDLRVVS
VFTFDPNEED QDANGLIGEP DFDIRVDAPE SRHSREKLEE YVADYNALYR TQHSVRDSKA
FYTYYKDIAK RFKEREKESF KDKDRADILL VVNMFLTGFD AKKINTLYVD KNLKYHGLIQ
AYSRTNRILG ELKSQGNIVC FRNLKENTDE AIRLFCDTEA SEDVLMEPYE VYMERFNQGV
RHLLEIAATP DAVNGLFTEE EQLAYVKAFR QLIVTLNKLK PFNDFSWSDL ELTEQRFEDY
KSKYLDIYDR THAWQEGASI IEEIDFQLEL IRRDEVNVGY IVKLLSDIQY RKQQTGSAQP
GADSVRTVLE MLGREAQLRS KRELIERFIA EYMPQLTADQ DLEEMFTGYW NREKRVAVND
LCRRERLDKE AVYRMMDEYH FSGKDPLRET VFSALEYKPK LMERKKVYSR VLGEMQGIIQ
RFDEGTGSLE VHEESAAYNS RPIHEVAHRI GDKELFFSDE INSNRNVTEL VRFGLTVDRP
YRERLESLSA YPLAGELLAR GIVSDTILTE YFGLTAEFET VLKAYDFHFS EAENFRDGSV
FWSLTEAREG STVLEFALNA YGYTLVIGGP VLAFLALYGS ASAGLETLQE HIRQRFGKSG
EQNEPSVIIN KDLEAEFRKI KEERNRSVQK TNKH
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