| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_0948 |
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| Symbol | |
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| ID | 3763967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurimonas denitrificans DSM 1251 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007575 |
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| Strand | + |
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| Start bp | 988657 |
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| End bp | 991749 |
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| Gene Length | 3093 bp |
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| Protein Length | 1030 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | |
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| Product | Type I site-specific deoxyribonuclease HsdR |
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| Protein accession | YP_393461 |
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| Protein GI | 78777146 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000221808 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGATA ACATTACACT TGAACAAGTA ATACAACAAA ACTGTATCAA TCTTTTAAGC
CATAAAGAGT TTGGATATAA GTTTATAACC AAAGAAGATA ATCTTATTTT TAGAGAAAAT
AAAACCTCCA CCGTGCTTTT AAAAAAGATG CTTATAGAGA GACTTTATGC CTTAAATAGC
TATGAGTACA AAGGGCAAAA CTATAAGTTT AGTGCTAATA ATATAGCCAA AGCAGTTGAA
GACTTGGATG TATCTTTAAA TGAGGGATTA ATAGTAGCAA ATGAGAAAAT CACCAATCAT
CTACTTTTAG GTACTAGTTA CGAAGAGAAC CTTGATGATG GCACTAAAAA AAGTTTCTCT
TTTAGATACA TCGACTTTGA AAACATTGAA AATAACCACT TTTTTGTAAC AGAAGAGTTT
ATAGTGGATC GTGCTAACCA AAACGAAATT ACAAAAACTA GAAGACCTGA TTTGATGGTG
TTTGTAAATG GCATCCCACT AGTGGTAATT GAGCTAAAAA AATCAAGTCT AAATTATGAA
AATGGTATCA AGCAGCTTGA AAAAGAGCAA AAAAAAGATG AAATACCGCA TCTGTTTAAA
TATATCCAAC TAACTATTGC AGCAAATAGT AATGAAGCTA GATATGGAAC CATGGGAACA
CCTTTAAAGT TTTATAGCTT GTGGAAAGAG GAAGAGAGCG AAAAGGCAAA AACAACTCTA
AAAACGATGA TACAAAATAG AGAAGTAACT AGTCTGGACC TTACTTTATT TGCGCTTTTA
TCGAAAGATA GGCTGTTAAG ACTTATAAGA CACTATATTT TATTTGATAA AAAAGTAAAA
AAAGTGAGCC GTTATCAACA GTTCTTTGGA ATTGAAAAGA CACTTAAAAG AGTAGAAAAG
ATAACAGATG GTATAAGAGC TGGTGGACTT ATCTGGCATA CTCAAGGAAG TGGTAAATCT
CTGACAATGG TAATGCTTAC AAAACTTCTA AAATTAACTT ACACTAATGC AAAAATCATA
GTAGTAACCG ATAGAGTTGA TTTGGATGAG CAGATTCATA AAACTTTTGA AAATACTGAC
ATCAAAGCAG GAAGAGCAAG TAGTGGAAGT GATTTGATAG AAAAACTTCA AAGCGGTATA
AGTGTGATTA CAACACTTGT ACATAAGTTT GAAAAGGTAA GAAACTCAAA AACTGTTATC
AATGATAACA ATGTATTCGT GCTAGTAGAT GAGTCTCACC GTACTCAAGG TGGAGATTTG
CACAATGCTA TGAAAAAAGC TCTACCTCTT GCTTGTTATC TTGGATTTAC AGGAACACCA
CTTCTTAAAA AAGAGAAAAA TAAAAACAGT TTTTTAAAGT TTGGTGGTGA AATACATAGA
TATACCATAG ATGACGCTGT AAAAGATGGA GCAGTTTTAC CATTGCTCTA TGAAGGAAGG
CTTGTAGATC AAGAGGTACT TAGTCCGGAT GGATTGGTGC GAAAGTTCAA CATGATCGCA
AGAGAGTTAA GTGATGATGC AAAAAGAGAT TTGCAGCACA AATGGGCGAG GTTTCAAAAA
GTTGCATCAA GTGAGCAAAG ACTTGAACTA ATAGCACTAG ATATTAATGA GCACTTCAAA
AAAACTTTAA AAATGTCAAA TAGTGGATTT AAAGCGATGT TTGCGACAAG TAGCAAGTAT
GAAGCTATAA AATATCATGA GATTTTTGAA GAGTATGGAG ATATACGAAC TGCTTATGTA
ATTTCAAGCA ATGAACATGA AGAACTAGAT GGTGGAAATA AAGAATATGT GGCAAAAGCA
TGGCAAGAGA CTATCAAAAA CTATGGAAGT GAAGAAGAAT ATCTAAAATA TGTAAAAAAT
GAATTTATTC ATGGTGATGA GATAGATTTA CTGATTGTTG TAGATAAGCT TTTAACTGGT
TTTGATGCCC CAAGAGCAAG TACGCTTTAT ATAGATAAAC AACTAAAAGA ACATAACCTT
TTACAAGCAA TTGCAAGGGT AAATAGACTT TATGATGGAA AAGATTATGG GTATATTGTT
GATTATAGAG GGCTTCTAGG AGAACTAGAC CAGGCTTTGA CAAATTATGC TTCACTTGAT
GGCTTTGATC CAGAGGATTT GACGGGAGCT GTAGTAGATG TAAGAAGTGA AATAGCAAAA
GCTAAAACTT ATTACACCCA TTTAGAAGAC CTTTTTAGTG ATGTTAAATT CAAAGATGAT
TTAGAAAGTT ATGTAGTTGT ATTAGCAGAT ATTCAAAAAA GAGATGATTT TAAAGAGTGG
TTATCACACT TCTCTCGTGC TTTTAAATTA GGACTTTCTA GTGAAAAAAT CGATGACATT
TTAAGTGAGA ATGAAATCAA GCTATACAAG AAAAAAATCA AATTTTACAA TGAACTCAGA
AAAGTAGTGC AGCTACGATA TCACGAAACT TGTGATTTTG GAAAATATGA AGAGCAGATG
CAAAAGCTAC TTGACACCTT TGTAAGTGCC AAAGAGGTGA ATGAGCTTAC AAAGCTTGTA
AATATCTTTG AAACAGAGTT TGAAGAAGAG GTGCAAAGGG TTGAGGGTAA AAGTGCAAAA
GCAGACACAA TTTTGAGTGC TGTAAGTGCT GTTGTAAAAG AAAAAATGGA ATCAAATCCA
GCATTTTATA AGTCAATTGC CCAGCAAATA GAAGATGTAA TCAATGAATA TAACGCTAAA
AGACTAAGCG AAGAGGAAAA ATTAGCAAAA GCAAAACAAT TAAAAGACTT AATGACAGGT
ATGTCCAAAC CAAATGAAGA CAAATATCCA AAAGAGTTTG AAAATAAAAA AACTCTACTA
GCTATATATG ATAATTTAGG TGACATTTTG GGTAACTTAG AAGTTGTTGA TTTTGAACTG
ATTGTTAAAA ATTTGACTTT GAAATTTGAT GAAATTTATT CAGGAGCTTC TAAAAAACCT
GAATGGCATA AAAATAAAGA TGTTGAAAAT GAAATAACAA GTGCAATGGA AGATGTTCTT
TGGGATATAG AGGATGAATA TGATATATCA ATCGAAAACA AAGAAAAAAT TTATCAAACT
ATTAGAGGTA TAGGGATAAG TTTTTATGCT TGA
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| Protein sequence | MNDNITLEQV IQQNCINLLS HKEFGYKFIT KEDNLIFREN KTSTVLLKKM LIERLYALNS
YEYKGQNYKF SANNIAKAVE DLDVSLNEGL IVANEKITNH LLLGTSYEEN LDDGTKKSFS
FRYIDFENIE NNHFFVTEEF IVDRANQNEI TKTRRPDLMV FVNGIPLVVI ELKKSSLNYE
NGIKQLEKEQ KKDEIPHLFK YIQLTIAANS NEARYGTMGT PLKFYSLWKE EESEKAKTTL
KTMIQNREVT SLDLTLFALL SKDRLLRLIR HYILFDKKVK KVSRYQQFFG IEKTLKRVEK
ITDGIRAGGL IWHTQGSGKS LTMVMLTKLL KLTYTNAKII VVTDRVDLDE QIHKTFENTD
IKAGRASSGS DLIEKLQSGI SVITTLVHKF EKVRNSKTVI NDNNVFVLVD ESHRTQGGDL
HNAMKKALPL ACYLGFTGTP LLKKEKNKNS FLKFGGEIHR YTIDDAVKDG AVLPLLYEGR
LVDQEVLSPD GLVRKFNMIA RELSDDAKRD LQHKWARFQK VASSEQRLEL IALDINEHFK
KTLKMSNSGF KAMFATSSKY EAIKYHEIFE EYGDIRTAYV ISSNEHEELD GGNKEYVAKA
WQETIKNYGS EEEYLKYVKN EFIHGDEIDL LIVVDKLLTG FDAPRASTLY IDKQLKEHNL
LQAIARVNRL YDGKDYGYIV DYRGLLGELD QALTNYASLD GFDPEDLTGA VVDVRSEIAK
AKTYYTHLED LFSDVKFKDD LESYVVVLAD IQKRDDFKEW LSHFSRAFKL GLSSEKIDDI
LSENEIKLYK KKIKFYNELR KVVQLRYHET CDFGKYEEQM QKLLDTFVSA KEVNELTKLV
NIFETEFEEE VQRVEGKSAK ADTILSAVSA VVKEKMESNP AFYKSIAQQI EDVINEYNAK
RLSEEEKLAK AKQLKDLMTG MSKPNEDKYP KEFENKKTLL AIYDNLGDIL GNLEVVDFEL
IVKNLTLKFD EIYSGASKKP EWHKNKDVEN EITSAMEDVL WDIEDEYDIS IENKEKIYQT
IRGIGISFYA
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