More than 300 homologs were found in PanDaTox collection
for query gene Mboo_0561 on replicon NC_009712
Organism: Candidatus Methanoregula boonei 6A8



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009712  Mboo_0561  multiple antibiotic resistance (MarC)-related protein  100 
 
 
207 aa  398  9.999999999999999e-111  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.143657 
 
 
-
 
NC_008942  Mlab_0442  hypothetical protein  42.01 
 
 
172 aa  139  1.9999999999999998e-32  Methanocorpusculum labreanum Z  Archaea  normal  normal 
 
 
-
 
NC_013521  Sked_27780  conserved hypothetical protein TIGR00427  32.46 
 
 
203 aa  94  2e-18  Sanguibacter keddieii DSM 10542  Bacteria  decreased coverage  0.004251  normal  0.739929 
 
 
-
 
NC_013530  Xcel_0772  multiple antibiotic resistance (MarC)-related protein  31.82 
 
 
211 aa  92.8  3e-18  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_0906  multiple antibiotic resistance (MarC)-related proteins  30.39 
 
 
203 aa  92.4  4e-18  Paracoccus denitrificans PD1222  Bacteria  normal  0.201578  normal  0.0510602 
 
 
-
 
NC_009049  Rsph17029_1540  multiple antibiotic resistance (MarC)-related proteins  30.81 
 
 
206 aa  91.3  1e-17  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.29956  normal 
 
 
-
 
NC_007493  RSP_2896  multidrug ABC transporter  30.81 
 
 
206 aa  91.3  1e-17  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2164  hypothetical protein  30.15 
 
 
214 aa  87.8  9e-17  Yersinia pestis Angola  Bacteria  normal  0.033055  normal  0.026113 
 
 
-
 
NC_013889  TK90_0587  multiple antibiotic resistance (MarC)-related protein  31.31 
 
 
235 aa  87.8  1e-16  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0123495 
 
 
-
 
NC_007796  Mhun_1498  multiple antibiotic resistance (MarC)-related proteins  26.96 
 
 
219 aa  87.4  1e-16  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_008044  TM1040_0953  multiple antibiotic resistance (MarC)-related proteins  29.74 
 
 
207 aa  87  2e-16  Ruegeria sp. TM1040  Bacteria  normal  0.838216  normal 
 
 
-
 
NC_010465  YPK_2071  hypothetical protein  28.64 
 
 
214 aa  87  2e-16  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.0381177  n/a   
 
 
-
 
NC_009708  YpsIP31758_1962  hypothetical protein  28.64 
 
 
214 aa  87  2e-16  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2196  hypothetical protein  28.28 
 
 
214 aa  86.3  3e-16  Dickeya zeae Ech1591  Bacteria  normal  0.522591  n/a   
 
 
-
 
NC_009952  Dshi_1348  multiple antibiotic resistance (MarC)-related protein  31.53 
 
 
208 aa  86.3  3e-16  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.160191 
 
 
-
 
NC_007802  Jann_1818  multiple antibiotic resistance (MarC)-related proteins  29.59 
 
 
205 aa  86.7  3e-16  Jannaschia sp. CCS1  Bacteria  normal  normal  0.397202 
 
 
-
 
NC_002936  DET1449  MarC membrane protein  31.77 
 
 
203 aa  85.9  4e-16  Dehalococcoides ethenogenes 195  Bacteria  unclonable  0.000000727679  n/a   
 
 
-
 
NC_009455  DehaBAV1_1251  multiple antibiotic resistance (MarC)-related protein  32.29 
 
 
203 aa  85.9  4e-16  Dehalococcoides sp. BAV1  Bacteria  decreased coverage  0.0000000866197  n/a   
 
 
-
 
NC_008228  Patl_0612  multiple antibiotic resistance (MarC)-related proteins  33.17 
 
 
208 aa  84.3  0.000000000000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0846  multiple antibiotic resistance (MarC)-related protein  31.16 
 
 
192 aa  84  0.000000000000001  Opitutus terrae PB90-1  Bacteria  normal  0.687468  normal 
 
 
-
 
NC_009832  Spro_2703  hypothetical protein  28.28 
 
 
214 aa  84  0.000000000000002  Serratia proteamaculans 568  Bacteria  hitchhiker  0.000872945  hitchhiker  0.000692167 
 
 
-
 
NC_013526  Tter_2843  multiple antibiotic resistance (MarC)-related protein  32.65 
 
 
212 aa  83.2  0.000000000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_1228  membrane transporter, MarC family  31.77 
 
 
203 aa  82.8  0.000000000000003  Dehalococcoides sp. VS  Bacteria  unclonable  0.000000000000452598  n/a   
 
 
-
 
NC_012850  Rleg_1929  multiple antibiotic resistance (MarC)-related protein  30.5 
 
 
215 aa  83.2  0.000000000000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.604403  normal 
 
 
-
 
NC_008698  Tpen_1642  multiple antibiotic resistance (MarC)-related proteins  25.64 
 
 
203 aa  83.2  0.000000000000003  Thermofilum pendens Hrk 5  Archaea  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_1125  multiple antibiotic resistance (MarC)-related protein  28.14 
 
 
207 aa  82  0.000000000000006  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.0974003 
 
 
-
 
NC_013037  Dfer_5115  multiple antibiotic resistance (MarC)-related protein  33.53 
 
 
189 aa  81.3  0.00000000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.316218 
 
 
-
 
NC_012669  Bcav_2908  multiple antibiotic resistance (MarC)-related protein protein  33.67 
 
 
206 aa  80.5  0.00000000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.275757  normal  0.0232741 
 
 
-
 
NC_008228  Patl_3498  multiple antibiotic resistance (MarC)-related proteins  33.33 
 
 
202 aa  80.5  0.00000000000001  Pseudoalteromonas atlantica T6c  Bacteria  unclonable  0.000000046015  n/a   
 
 
-
 
CP001509  ECD_01216  predicted inner membrane protein  28.35 
 
 
215 aa  80.1  0.00000000000002  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2408  multiple antibiotic resistance (MarC)-related protein  28.35 
 
 
215 aa  80.1  0.00000000000002  Escherichia coli DH1  Bacteria  hitchhiker  0.0000022238  n/a   
 
 
-
 
NC_009801  EcE24377A_1390  hypothetical protein  28.35 
 
 
215 aa  80.1  0.00000000000002  Escherichia coli E24377A  Bacteria  normal  0.718233  n/a   
 
 
-
 
NC_010468  EcolC_2386  hypothetical protein  28.35 
 
 
215 aa  80.1  0.00000000000002  Escherichia coli ATCC 8739  Bacteria  normal  0.377039  hitchhiker  0.00000152892 
 
 
-
 
NC_009441  Fjoh_0524  multiple antibiotic resistance (MarC)-related protein  28.93 
 
 
192 aa  80.1  0.00000000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A1351  hypothetical protein  28.35 
 
 
215 aa  80.1  0.00000000000002  Escherichia coli HS  Bacteria  hitchhiker  0.000939425  n/a   
 
 
-
 
NC_010498  EcSMS35_1900  hypothetical protein  28.35 
 
 
215 aa  80.1  0.00000000000002  Escherichia coli SMS-3-5  Bacteria  normal  0.382554  normal  0.103806 
 
 
-
 
NC_013162  Coch_2056  multiple antibiotic resistance (MarC)-related protein  31.28 
 
 
193 aa  79.7  0.00000000000002  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_2433  multiple antibiotic resistance (MarC)-related protein  30.17 
 
 
191 aa  80.1  0.00000000000002  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.382546 
 
 
-
 
NC_011353  ECH74115_1726  hypothetical protein  28.35 
 
 
215 aa  80.1  0.00000000000002  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.345038  normal  0.523448 
 
 
-
 
NC_012892  B21_01226  hypothetical protein  28.35 
 
 
215 aa  80.1  0.00000000000002  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_0570  multiple antibiotic resistance (MarC)-related protein  30.85 
 
 
217 aa  80.1  0.00000000000002  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B1397  hypothetical protein  27.32 
 
 
215 aa  79.7  0.00000000000003  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.126468  n/a   
 
 
-
 
NC_010658  SbBS512_E1407  hypothetical protein  28.35 
 
 
215 aa  79.7  0.00000000000003  Shigella boydii CDC 3083-94  Bacteria  normal  0.090251  n/a   
 
 
-
 
NC_011083  SeHA_C1938  hypothetical protein  27.32 
 
 
215 aa  79.7  0.00000000000003  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.476555 
 
 
-
 
NC_011094  SeSA_A1881  hypothetical protein  27.32 
 
 
215 aa  79.7  0.00000000000003  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.66407 
 
 
-
 
NC_009483  Gura_0644  multiple antibiotic resistance (MarC)-related protein  31.28 
 
 
210 aa  79.7  0.00000000000003  Geobacter uraniireducens Rf4  Bacteria  normal  0.0517184  n/a   
 
 
-
 
NC_011205  SeD_A1580  hypothetical protein  27.32 
 
 
215 aa  79.7  0.00000000000003  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.439502  normal 
 
 
-
 
NC_011080  SNSL254_A1875  hypothetical protein  27.32 
 
 
215 aa  79.7  0.00000000000003  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.67019  normal 
 
 
-
 
NC_009436  Ent638_2303  hypothetical protein  27.08 
 
 
215 aa  79.3  0.00000000000004  Enterobacter sp. 638  Bacteria  normal  0.45168  normal 
 
 
-
 
NC_009511  Swit_2873  multiple antibiotic resistance (MarC)-related protein  34.51 
 
 
213 aa  78.6  0.00000000000006  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0453774 
 
 
-
 
NC_010501  PputW619_4615  multiple antibiotic resistance (MarC)-related protein  30.37 
 
 
198 aa  77.8  0.00000000000009  Pseudomonas putida W619  Bacteria  normal  normal  0.446372 
 
 
-
 
NC_011369  Rleg2_1743  multiple antibiotic resistance (MarC)-related protein  30.24 
 
 
215 aa  77.4  0.0000000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.565671  normal  0.375082 
 
 
-
 
NC_007492  Pfl01_0610  multiple antibiotic resistance (MarC)-like proteins  30.37 
 
 
198 aa  77.8  0.0000000000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_1933  multiple antibiotic resistance (MarC)-related proteins  32.32 
 
 
210 aa  77.8  0.0000000000001  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00000000193827  hitchhiker  0.0000682503 
 
 
-
 
NC_009505  BOV_1059  hypothetical protein  27.41 
 
 
209 aa  77.8  0.0000000000001  Brucella ovis ATCC 25840  Bacteria  normal  0.728304  n/a   
 
 
-
 
NC_013946  Mrub_2097  multiple antibiotic resistance (MarC)-related protein  29.9 
 
 
206 aa  77.8  0.0000000000001  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_008553  Mthe_1410  multiple antibiotic resistance (MarC)-related proteins  31.53 
 
 
231 aa  77.8  0.0000000000001  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_008687  Pden_4013  multiple antibiotic resistance (MarC)-related proteins  30.33 
 
 
210 aa  77.8  0.0000000000001  Paracoccus denitrificans PD1222  Bacteria  normal  0.648921  normal 
 
 
-
 
NC_002947  PP_4825  MarC membrane protein  29.84 
 
 
198 aa  76.6  0.0000000000002  Pseudomonas putida KT2440  Bacteria  normal  normal  0.495877 
 
 
-
 
NC_003910  CPS_1844  hypothetical protein  31.63 
 
 
207 aa  77  0.0000000000002  Colwellia psychrerythraea 34H  Bacteria  normal  0.678437  n/a   
 
 
-
 
NC_004116  SAG2143  hypothetical protein  30.1 
 
 
203 aa  77  0.0000000000002  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0929738  n/a   
 
 
-
 
NC_004578  PSPTO_4869  membrane protein, MarC family  29.84 
 
 
198 aa  77  0.0000000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010525  Tneu_0040  multiple antibiotic resistance (MarC)-related protein  26.9 
 
 
206 aa  77  0.0000000000002  Thermoproteus neutrophilus V24Sta  Archaea  normal  normal  0.0101018 
 
 
-
 
NC_009512  Pput_4700  multiple antibiotic resistance (MarC)-related protein  29.84 
 
 
198 aa  76.6  0.0000000000002  Pseudomonas putida F1  Bacteria  normal  0.548338  normal 
 
 
-
 
NC_008048  Sala_3099  multiple antibiotic resistance (MarC)-related proteins  34.97 
 
 
209 aa  77  0.0000000000002  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.554479  normal 
 
 
-
 
NC_011832  Mpal_1556  multiple antibiotic resistance (MarC)-related protein  28.71 
 
 
216 aa  76.6  0.0000000000002  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_013132  Cpin_1119  multiple antibiotic resistance (MarC)-related protein  29.07 
 
 
188 aa  76.6  0.0000000000003  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.628866 
 
 
-
 
NC_008025  Dgeo_2143  multiple antibiotic resistance (MarC)-related proteins  26.42 
 
 
214 aa  76.3  0.0000000000003  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3316  multiple antibiotic resistance protein  29.9 
 
 
219 aa  76.3  0.0000000000003  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0229288 
 
 
-
 
NC_009635  Maeo_1199  multiple antibiotic resistance (MarC)-related protein  32.31 
 
 
217 aa  76.3  0.0000000000003  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_008609  Ppro_1334  multiple antibiotic resistance (MarC)-related proteins  28.26 
 
 
202 aa  76.3  0.0000000000003  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0552137  n/a   
 
 
-
 
NC_008709  Ping_1391  multiple antibiotic resistance (MarC)-related proteins  28.95 
 
 
198 aa  75.9  0.0000000000004  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_1323  multiple antibiotic resistance (MarC)-related protein  31.25 
 
 
204 aa  75.5  0.0000000000005  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.199618 
 
 
-
 
NC_010322  PputGB1_4878  multiple antibiotic resistance (MarC)-related protein  28.5 
 
 
198 aa  75.5  0.0000000000005  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_06663  hypothetical protein  26.6 
 
 
220 aa  75.5  0.0000000000005  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013061  Phep_0996  multiple antibiotic resistance (MarC)-related protein  27.91 
 
 
189 aa  75.5  0.0000000000005  Pedobacter heparinus DSM 2366  Bacteria  normal  0.643344  normal 
 
 
-
 
NC_007005  Psyr_4409  multiple antibiotic resistance (MarC)-related proteins  29.84 
 
 
198 aa  75.5  0.0000000000006  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007204  Psyc_0635  multiple antibiotic resistance (MarC)-related proteins  29.74 
 
 
201 aa  75.5  0.0000000000006  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.586575 
 
 
-
 
NC_007643  Rru_A2518  multiple antibiotic resistance (MarC)-related proteins  28.23 
 
 
211 aa  75.5  0.0000000000006  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.135192  n/a   
 
 
-
 
NC_004310  BR1098  hypothetical protein  26.9 
 
 
209 aa  75.1  0.0000000000007  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_2385  hypothetical protein  27.14 
 
 
209 aa  75.1  0.0000000000007  Agrobacterium vitis S4  Bacteria  normal  0.0520514  n/a   
 
 
-
 
NC_009636  Smed_1240  multiple antibiotic resistance (MarC)-related protein  28.43 
 
 
209 aa  75.1  0.0000000000007  Sinorhizobium medicae WSM419  Bacteria  normal  0.185324  normal  0.313526 
 
 
-
 
NC_007969  Pcryo_0603  multiple antibiotic resistance (MarC)-related proteins  29.74 
 
 
201 aa  75.1  0.0000000000007  Psychrobacter cryohalolentis K5  Bacteria  normal  0.708242  normal  0.450021 
 
 
-
 
NC_011901  Tgr7_0693  multiple antibiotic resistance (MarC)-related protein  29.74 
 
 
209 aa  74.7  0.0000000000008  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2943  multiple antibiotic resistance (MarC)-related protein  29.29 
 
 
205 aa  74.7  0.0000000000009  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.434605 
 
 
-
 
NC_011146  Gbem_0428  multiple antibiotic resistance (MarC)-related protein  27.6 
 
 
219 aa  74.3  0.000000000001  Geobacter bemidjiensis Bem  Bacteria  normal  0.157732  n/a   
 
 
-
 
NC_013926  Aboo_0644  multiple antibiotic resistance (MarC)-related protein  29.7 
 
 
204 aa  74.3  0.000000000001  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_008009  Acid345_0603  multiple antibiotic resistance MarC-related protein  31.5 
 
 
216 aa  73.9  0.000000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_010830  Aasi_1097  hypothetical protein  28.73 
 
 
197 aa  73.9  0.000000000001  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal  0.177392 
 
 
-
 
NC_009634  Mevan_1278  multiple antibiotic resistance (MarC)-related protein  26.73 
 
 
212 aa  73.9  0.000000000001  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1917  multiple antibiotic resistance (MarC)-related protein  28.27 
 
 
211 aa  73.9  0.000000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0692726  n/a   
 
 
-
 
NC_007955  Mbur_0527  multiple antibiotic resistance (MarC)-related proteins  28.71 
 
 
212 aa  73.2  0.000000000002  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_014230  CA2559_02065  putative transmembrane protein  30.52 
 
 
193 aa  73.9  0.000000000002  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.808084  n/a   
 
 
-
 
NC_013174  Jden_0705  multiple antibiotic resistance (MarC)-related protein  32.69 
 
 
210 aa  73.2  0.000000000002  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_0161  hypothetical protein  27.32 
 
 
210 aa  72.8  0.000000000003  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0451  multiple antibiotic resistance (MarC)-related protein  27.6 
 
 
219 aa  73.2  0.000000000003  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010581  Bind_1880  multiple antibiotic resistance (MarC)-related protein  27.94 
 
 
209 aa  72.8  0.000000000003  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_0705  multiple antibiotic resistance (MarC)-related protein  27.23 
 
 
198 aa  72.4  0.000000000004  Pseudomonas mendocina ymp  Bacteria  normal  0.561247  normal 
 
 
-
 
NC_009667  Oant_2183  multiple antibiotic resistance (MarC)-related protein  27.41 
 
 
209 aa  72.8  0.000000000004  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.118995  n/a   
 
 
-
 
NC_009380  Strop_0736  multiple antibiotic resistance (MarC)-related protein  36.41 
 
 
204 aa  72.4  0.000000000004  Salinispora tropica CNB-440  Bacteria  normal  0.588775  normal  0.31372 
 
 
-
 
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