Gene Tneu_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0040 
Symbol 
ID6164637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp27626 
End bp28246 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content60% 
IMG OID641667205 
Productmultiple antibiotic resistance (MarC)-related protein 
Protein accessionYP_001793444 
Protein GI171184525 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0101018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATC TGGGTTCTGA CCTAATGGAG CTACTGACGG CCGTGGTTGC CCTCTACGTA 
ATAGTTGACC CTCTCGGCAA TATACCCCTA TTCGCAGCCC TCACGGCTGG GCTGAGCGAG
GCGCAGAGGA GCAGGGTGCT TCTGCTCTCC GTGTTGGTGG CCTCGGCCGT GCTCGTGCTC
TTCGCCGTAT TCGGCGTCGA GATCTTCGGC TACTTCGGGG TGGAGCTAGG CGATTTCATG
ATAGCCAGCG GCCTCATCTT GATCTCCTTC TCCCTCCACC AACTGATAAG GCCCTACGAG
CAGCGTCCCG CAACAGACGG CCTTGAGGTG GCGGTCGTCC CTCTCGCTGT TCCTTACCTG
GCGGGCCCCG CGTCCATCTC CTACGTCCTC CTCATGTCTA AACACATGGG CGTCGCCCCC
ACTCTCTTGG CCGTCGCGGC GGTGTCGCTC CTCACCTTCG CCACCCTACG CGCCTCCGGA
TTTATAATGA GGGCGTTGGG CGTGCTCGGG ATTAGGGTGG TGGAAAAGAT AATGCTTATC
CTAAGCGTCG CAATTGGGGT ATCGTTGGTG AGGAGGGGGC TAGAGGCCGG GTGGTCTCTC
GGCGCAAGTA GCAGGGGCTA A
 
Protein sequence
MTNLGSDLME LLTAVVALYV IVDPLGNIPL FAALTAGLSE AQRSRVLLLS VLVASAVLVL 
FAVFGVEIFG YFGVELGDFM IASGLILISF SLHQLIRPYE QRPATDGLEV AVVPLAVPYL
AGPASISYVL LMSKHMGVAP TLLAVAAVSL LTFATLRASG FIMRALGVLG IRVVEKIMLI
LSVAIGVSLV RRGLEAGWSL GASSRG