| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0524 |
|---|
| Symbol | |
|---|
| ID | 5089837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 556499 |
|---|
| End bp | 557077 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644739923 |
|---|
| Product | multiple antibiotic resistance (MarC)-related protein |
|---|
| Protein accession | YP_001192878 |
|---|
| Protein GI | 146298287 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2095] Multiple antibiotic transporter |
|---|
| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGAAA TCGATTTTAA AGAAATCATT ACAGTAAGTA TGGTGCTTTT TGCAGTAATT
GATATTGTTG GTTCAATTCC TATTATTGTA AACTTAAGAG CAAAAGTCGG ACACATCGAA
TCTGAAAAAG CTTCTATTGT TGCCGGAGCT ATTATGATTG TTTTTCTTTT TGTTGGAGAA
GGCTTATTGA ACCTGATTGG TATCGACGTG CATTCGTTTG CTGTTGCAGG TTCATTTGTA
TTGTTCTTTT TGGCGTTAGA AATGATTTTA GGAATTAGAA TTTATCGTGA CGAAGAACCG
GGTTCTGCTT CTATTGTACC TCTTGCCTTT CCTTTAATTG CCGGAGCGGG AACTATGACA
ACTTTACTTT CGCTTCGTTC ACAATTTCAT ACCATTAATA TTATTACAGC TATTGTATTG
AATATTATAT TGGTTTATAT CGTTTTGAAG TCTTCTAAAA AAATTGAAAA TTTGTTAGGA
GAAAACGGAC TTGGTGTGGT TCGTAAGACA TTTGGTGTTA TACTTTTGGC TATTGCTGTT
AAATTATTCG CCGCTAATGT TAAAGGTTTG TTTGTCTAA
|
|---|
| Protein sequence | MLEIDFKEII TVSMVLFAVI DIVGSIPIIV NLRAKVGHIE SEKASIVAGA IMIVFLFVGE
GLLNLIGIDV HSFAVAGSFV LFFLALEMIL GIRIYRDEEP GSASIVPLAF PLIAGAGTMT
TLLSLRSQFH TINIITAIVL NIILVYIVLK SSKKIENLLG ENGLGVVRKT FGVILLAIAV
KLFAANVKGL FV
|
|---|
| |