More than 300 homologs were found in PanDaTox collection
for query gene Krad_2036 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_2036  short-chain dehydrogenase/reductase SDR  100 
 
 
259 aa  498  1e-140  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_4482  short-chain dehydrogenase/reductase SDR  48.77 
 
 
244 aa  239  2e-62  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.00000000123251 
 
 
-
 
NC_013131  Caci_6561  short-chain dehydrogenase/reductase SDR  53.59 
 
 
240 aa  184  1.0000000000000001e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3908  short-chain dehydrogenase/reductase SDR  43.53 
 
 
272 aa  149  4e-35  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.106718  normal  0.186536 
 
 
-
 
NC_008148  Rxyl_0016  short-chain dehydrogenase/reductase SDR  43.16 
 
 
260 aa  147  1.0000000000000001e-34  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4853  short-chain dehydrogenase/reductase SDR  40.87 
 
 
248 aa  137  2e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.154391  normal  0.241568 
 
 
-
 
NC_008726  Mvan_3508  short-chain dehydrogenase/reductase SDR  44.51 
 
 
278 aa  133  3.9999999999999996e-30  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.0773345 
 
 
-
 
NC_013595  Sros_8706  short-chain dehydrogenase/reductase SDR  38.3 
 
 
255 aa  130  2.0000000000000002e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_2238  short-chain dehydrogenase/reductase SDR  40.31 
 
 
317 aa  130  3e-29  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0943  Short-chain dehydrogenase/reductase SDR  35.02 
 
 
293 aa  129  4.0000000000000003e-29  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0488  short-chain dehydrogenase/reductase SDR  31.08 
 
 
261 aa  129  4.0000000000000003e-29  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009972  Haur_1067  short-chain dehydrogenase/reductase SDR  35.32 
 
 
258 aa  129  4.0000000000000003e-29  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_5405  short-chain dehydrogenase/reductase SDR  40.54 
 
 
273 aa  128  7.000000000000001e-29  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0135056  normal  0.0706675 
 
 
-
 
NC_010338  Caul_0159  short-chain dehydrogenase/reductase SDR  40.51 
 
 
249 aa  129  7.000000000000001e-29  Caulobacter sp. K31  Bacteria  normal  0.410897  normal  0.168063 
 
 
-
 
NC_013922  Nmag_1285  short-chain dehydrogenase/reductase SDR  38.22 
 
 
266 aa  128  9.000000000000001e-29  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_009425  Ent638_4222  short-chain dehydrogenase/reductase SDR  40.93 
 
 
242 aa  127  1.0000000000000001e-28  Enterobacter sp. 638  Bacteria  normal  0.186526  normal 
 
 
-
 
NC_011729  PCC7424_0301  short-chain dehydrogenase/reductase SDR  38.86 
 
 
305 aa  127  2.0000000000000002e-28  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0783167 
 
 
-
 
NC_013730  Slin_2186  short-chain dehydrogenase/reductase SDR  38.14 
 
 
248 aa  127  2.0000000000000002e-28  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.0361624 
 
 
-
 
NC_010623  Bphy_3982  short-chain dehydrogenase/reductase SDR  36.36 
 
 
287 aa  126  4.0000000000000003e-28  Burkholderia phymatum STM815  Bacteria  hitchhiker  0.000201148  normal 
 
 
-
 
NC_009664  Krad_1946  short-chain dehydrogenase/reductase SDR  43.55 
 
 
299 aa  125  6e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1302  short-chain dehydrogenase/reductase SDR  44.32 
 
 
258 aa  125  8.000000000000001e-28  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.12307  hitchhiker  0.00977234 
 
 
-
 
NC_013037  Dfer_1115  short-chain dehydrogenase/reductase SDR  36.51 
 
 
281 aa  125  8.000000000000001e-28  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.299534  normal  0.313819 
 
 
-
 
NC_010725  Mpop_0368  short-chain dehydrogenase/reductase SDR  43.68 
 
 
248 aa  124  1e-27  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A1489  short chain dehydrogenase  35.27 
 
 
296 aa  124  2e-27  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_5046  short-chain dehydrogenase/reductase SDR  45.95 
 
 
291 aa  123  2e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5220  short-chain dehydrogenase/reductase SDR  39.46 
 
 
279 aa  124  2e-27  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_2999  short-chain dehydrogenase/reductase SDR  40.25 
 
 
250 aa  123  2e-27  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.109628  normal  0.14985 
 
 
-
 
NC_009664  Krad_1025  short chain dehydrogenase  43.17 
 
 
274 aa  123  3e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.150864  normal  0.667254 
 
 
-
 
NC_008541  Arth_3310  short-chain dehydrogenase/reductase SDR  39.6 
 
 
276 aa  123  3e-27  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_5502  short-chain dehydrogenase/reductase SDR  37.5 
 
 
282 aa  122  4e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_3104  short-chain dehydrogenase/reductase SDR  39.56 
 
 
252 aa  123  4e-27  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3217  short-chain dehydrogenase/reductase SDR  39.18 
 
 
253 aa  122  4e-27  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_0144  short-chain dehydrogenase/reductase SDR  36.64 
 
 
272 aa  123  4e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_3324  short-chain dehydrogenase/reductase SDR  42.02 
 
 
273 aa  122  6e-27  Dickeya zeae Ech1591  Bacteria  normal  0.180623  n/a   
 
 
-
 
NC_010087  Bmul_5635  short-chain dehydrogenase/reductase SDR  37.22 
 
 
247 aa  122  6e-27  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_1352  short-chain dehydrogenase/reductase SDR  40.52 
 
 
272 aa  120  1.9999999999999998e-26  Roseiflexus sp. RS-1  Bacteria  normal  0.15703  normal 
 
 
-
 
NC_008254  Meso_3769  short-chain dehydrogenase/reductase SDR  37.23 
 
 
247 aa  120  1.9999999999999998e-26  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4623  short-chain dehydrogenase/reductase SDR  37.04 
 
 
265 aa  120  1.9999999999999998e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_006055  Mfl173  dehydrogenase  31.54 
 
 
278 aa  120  3e-26  Mesoplasma florum L1  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4362  short-chain dehydrogenase/reductase SDR  45.65 
 
 
274 aa  120  3e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.236839  normal  0.0715195 
 
 
-
 
NC_010581  Bind_0037  short chain dehydrogenase  38.26 
 
 
283 aa  120  3e-26  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.40951  normal 
 
 
-
 
NC_013730  Slin_1313  short-chain dehydrogenase/reductase SDR  34.48 
 
 
262 aa  120  3e-26  Spirosoma linguale DSM 74  Bacteria  normal  0.133593  normal  0.554394 
 
 
-
 
NC_009720  Xaut_3335  short-chain dehydrogenase/reductase SDR  43.81 
 
 
246 aa  119  4.9999999999999996e-26  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_2502  short-chain dehydrogenase/reductase SDR  37.61 
 
 
279 aa  119  4.9999999999999996e-26  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.729969 
 
 
-
 
NC_008009  Acid345_3255  short-chain dehydrogenase/reductase SDR  34.17 
 
 
262 aa  119  4.9999999999999996e-26  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.207826 
 
 
-
 
NC_012880  Dd703_1248  short chain dehydrogenase  35.78 
 
 
282 aa  119  4.9999999999999996e-26  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_3902  short-chain dehydrogenase/reductase SDR  37.82 
 
 
246 aa  119  6e-26  Chelativorans sp. BNC1  Bacteria  normal  0.809389  n/a   
 
 
-
 
NC_011757  Mchl_1552  short-chain dehydrogenase/reductase SDR  36.77 
 
 
248 aa  119  6e-26  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0714452  normal 
 
 
-
 
NC_013501  Rmar_2639  short-chain dehydrogenase/reductase SDR  35.34 
 
 
238 aa  119  6e-26  Rhodothermus marinus DSM 4252  Bacteria  normal  0.37123  n/a   
 
 
-
 
NC_009338  Mflv_0930  short-chain dehydrogenase/reductase SDR  41.36 
 
 
279 aa  119  6e-26  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_1799  short-chain dehydrogenase/reductase SDR  40.25 
 
 
273 aa  119  7e-26  Caulobacter sp. K31  Bacteria  normal  normal  0.01823 
 
 
-
 
NC_011369  Rleg2_4296  short chain dehydrogenase  42 
 
 
280 aa  119  7e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4539  short-chain dehydrogenase/reductase SDR  43.17 
 
 
276 aa  118  7e-26  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1918  short chain dehydrogenase  36.95 
 
 
252 aa  119  7e-26  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.633362  n/a   
 
 
-
 
NC_007947  Mfla_0589  short-chain dehydrogenase/reductase SDR  37.5 
 
 
285 aa  118  7.999999999999999e-26  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.239273 
 
 
-
 
NC_007760  Adeh_3206  short-chain dehydrogenase/reductase SDR  38.3 
 
 
283 aa  118  9e-26  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3865  short-chain dehydrogenase/reductase SDR  36.73 
 
 
247 aa  118  9.999999999999999e-26  Serratia proteamaculans 568  Bacteria  normal  0.269971  normal 
 
 
-
 
NC_011757  Mchl_0767  short-chain dehydrogenase/reductase SDR  38.2 
 
 
330 aa  117  9.999999999999999e-26  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.415615 
 
 
-
 
NC_011886  Achl_3010  short-chain dehydrogenase/reductase SDR  36.71 
 
 
276 aa  117  9.999999999999999e-26  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.000215509 
 
 
-
 
NC_013037  Dfer_5584  short-chain dehydrogenase/reductase SDR  39.67 
 
 
344 aa  118  9.999999999999999e-26  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.753226  normal  0.910238 
 
 
-
 
NC_010172  Mext_1019  short-chain dehydrogenase/reductase SDR  38.2 
 
 
330 aa  118  9.999999999999999e-26  Methylobacterium extorquens PA1  Bacteria  normal  0.0961773  normal 
 
 
-
 
NC_010172  Mext_1321  short-chain dehydrogenase/reductase SDR  40 
 
 
271 aa  117  9.999999999999999e-26  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.318083 
 
 
-
 
NC_009077  Mjls_5048  short-chain dehydrogenase/reductase SDR  39.57 
 
 
279 aa  118  9.999999999999999e-26  Mycobacterium sp. JLS  Bacteria  normal  0.96036  normal 
 
 
-
 
NC_009667  Oant_2226  short-chain dehydrogenase/reductase SDR  38.12 
 
 
248 aa  117  9.999999999999999e-26  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_2810  short-chain dehydrogenase/reductase SDR  41.71 
 
 
284 aa  117  1.9999999999999998e-25  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.329601  normal 
 
 
-
 
NC_013525  Tter_0966  short-chain dehydrogenase/reductase SDR  33.47 
 
 
251 aa  117  1.9999999999999998e-25  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007777  Francci3_0676  short-chain dehydrogenase/reductase SDR  40.3 
 
 
254 aa  117  1.9999999999999998e-25  Frankia sp. CcI3  Bacteria  hitchhiker  0.00917144  normal  0.0792915 
 
 
-
 
NC_011071  Smal_1687  short chain dehydrogenase  34.4 
 
 
279 aa  117  1.9999999999999998e-25  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0911  short chain dehydrogenase  34.7 
 
 
242 aa  116  3e-25  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009719  Plav_1519  short-chain dehydrogenase/reductase SDR  32.34 
 
 
259 aa  116  3e-25  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_1481  short-chain dehydrogenase/reductase SDR  35.11 
 
 
239 aa  116  3e-25  Roseiflexus sp. RS-1  Bacteria  normal  0.175599  normal 
 
 
-
 
NC_013132  Cpin_3299  short-chain dehydrogenase/reductase SDR  33.19 
 
 
279 aa  116  3e-25  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.0000868521 
 
 
-
 
NC_008345  Sfri_2215  short chain dehydrogenase  34.84 
 
 
276 aa  117  3e-25  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_0292  short-chain dehydrogenase/reductase SDR  41.05 
 
 
262 aa  116  3e-25  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.469065 
 
 
-
 
NC_009439  Pmen_4578  short-chain dehydrogenase/reductase SDR  34.57 
 
 
264 aa  116  3e-25  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A0736  Short-chain dehydrogenase/reductase SDR  37.61 
 
 
272 aa  116  3.9999999999999997e-25  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_1468  short-chain dehydrogenase/reductase SDR  41.94 
 
 
277 aa  116  3.9999999999999997e-25  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.875416  normal 
 
 
-
 
NC_014248  Aazo_3368  short-chain dehydrogenase/reductase SDR  36.36 
 
 
241 aa  116  3.9999999999999997e-25  'Nostoc azollae' 0708  Bacteria  normal  0.119808  n/a   
 
 
-
 
NC_009720  Xaut_0982  short-chain dehydrogenase/reductase SDR  36.5 
 
 
268 aa  115  5e-25  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_4161  short-chain dehydrogenase/reductase SDR  40.43 
 
 
279 aa  115  5e-25  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0992  oxidoreductase, short-chain dehydrogenase/reductase family  30.83 
 
 
264 aa  116  5e-25  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4228  short-chain dehydrogenase/reductase SDR  40.91 
 
 
254 aa  115  5e-25  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1232  short-chain dehydrogenase/reductase SDR  37.98 
 
 
305 aa  116  5e-25  Nocardioides sp. JS614  Bacteria  normal  0.623354  n/a   
 
 
-
 
NC_013161  Cyan8802_0938  short chain dehydrogenase  34.7 
 
 
242 aa  115  6e-25  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1352  short-chain dehydrogenase/reductase SDR  35.81 
 
 
282 aa  115  6e-25  Methylobacterium extorquens PA1  Bacteria  normal  0.316546  normal  0.241504 
 
 
-
 
NC_012880  Dd703_1249  short chain dehydrogenase  40 
 
 
279 aa  115  6.9999999999999995e-25  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1950  putative short-chain dehydrogenase/reductase SDR  37.23 
 
 
284 aa  115  6.9999999999999995e-25  Burkholderia xenovorans LB400  Bacteria  normal  0.417893  normal  0.0791039 
 
 
-
 
NC_012850  Rleg_2480  short-chain dehydrogenase/reductase SDR  35.75 
 
 
245 aa  115  7.999999999999999e-25  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0458  short-chain dehydrogenase/reductase SDR  38.68 
 
 
257 aa  115  7.999999999999999e-25  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.706164 
 
 
-
 
NC_014158  Tpau_3608  Male sterility domain protein  38.46 
 
 
637 aa  115  8.999999999999998e-25  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.619777  n/a   
 
 
-
 
NC_009485  BBta_3170  putative Short-chain dehydrogenase/reductase  38.36 
 
 
544 aa  114  1.0000000000000001e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0745281 
 
 
-
 
NC_010581  Bind_0029  short chain dehydrogenase  41.62 
 
 
278 aa  114  1.0000000000000001e-24  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.148269  normal 
 
 
-
 
NC_010511  M446_1704  short-chain dehydrogenase/reductase SDR  36.84 
 
 
327 aa  115  1.0000000000000001e-24  Methylobacterium sp. 4-46  Bacteria  normal  0.151565  normal 
 
 
-
 
NC_013159  Svir_33490  short-chain alcohol dehydrogenase  37.56 
 
 
247 aa  114  1.0000000000000001e-24  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.343117  normal  0.392445 
 
 
-
 
NC_008541  Arth_2448  short chain dehydrogenase  40 
 
 
277 aa  114  1.0000000000000001e-24  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_2906  short-chain dehydrogenase/reductase SDR  35.75 
 
 
258 aa  114  1.0000000000000001e-24  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013757  Gobs_2096  short-chain dehydrogenase/reductase SDR  38.46 
 
 
276 aa  115  1.0000000000000001e-24  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2737  short-chain dehydrogenase/reductase SDR  39.15 
 
 
245 aa  114  1.0000000000000001e-24  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  34.05 
 
 
264 aa  115  1.0000000000000001e-24  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_009767  Rcas_2071  short-chain dehydrogenase/reductase SDR  35.94 
 
 
239 aa  114  2.0000000000000002e-24  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.420603  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>