Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3299 |
Symbol | |
ID | 8359465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4065101 |
End bp | 4065940 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644965472 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003122967 |
Protein GI | 256422314 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0000868521 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCAACA ACAACAACAG AGTATGGTTT GTAACTGGTG CTTCCAAGGG ATTGGGATTA AGCCTGGTAA AACAGCTGCT GGCCACAGGT CAACGCGTGG CAGCAACATC AAGAAAGATA GGAGAACTGG TAAAGGCGGT AAGTGAACAG TCTGCAGATT TCCTCCCACT GGAAACTGAC CTGGTGAGTG AAACCAGTGT AACAGCAGCG ATTGAAAAGA CAATTGCTAC TTTCGGCAGA CTGGATGTCG TAGTAAACAA TGCGGGTTAT GGTATCGGCG GTAGTATAGA AGAACTGACT GATAAAGAAA CCCGGGATGC CTTCGACGTC AATGTTTTCG GTACACTCAA TGTGATCCGC CTGGCAATGC CGCAGTTAAG GGCACAGCGT TCAGGACACA TCATCAATAT CTCATCCATC GCAGGTATTG CGCCAGCCAC CGGTTGGTCC ATCTATGGTG CAGCAAAACA TGCGGTGATA GGTCTGAGCG AAGTACTGGC AGAAGATGTG AAAGAGTTTG GTATCAAAGT GACCGTTGTA GCGCCGGGCG CATTCAGGAC CAGTTTCCTG ACAAAAGAAT CACTGACCAT GGCGAAAAAT AAGATTCCGG AATATACCGC TATCAGAAAT TCGCATGAGA AATACGAGTC AATGGATGGT CAACAGGCAG GAGATCCTGA CAAAGCAGCG GCAGCCATGA TCGCGATTGT CAACGAACAA AAGCCTCCTG TATACCTGTT ACTGGGTTCA GATGCTTACG AACGGGGTAT GGCTAAACTG GAGTTATTGA AAGACGCTTT TAAAGAAAAA GAAGCATTGA CAAAATCTAC CAGCTTTTAA
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Protein sequence | MSNNNNRVWF VTGASKGLGL SLVKQLLATG QRVAATSRKI GELVKAVSEQ SADFLPLETD LVSETSVTAA IEKTIATFGR LDVVVNNAGY GIGGSIEELT DKETRDAFDV NVFGTLNVIR LAMPQLRAQR SGHIINISSI AGIAPATGWS IYGAAKHAVI GLSEVLAEDV KEFGIKVTVV APGAFRTSFL TKESLTMAKN KIPEYTAIRN SHEKYESMDG QQAGDPDKAA AAMIAIVNEQ KPPVYLLLGS DAYERGMAKL ELLKDAFKEK EALTKSTSF
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