| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1687 |
|---|
| Symbol | |
|---|
| ID | 6475557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 1898147 |
|---|
| End bp | 1898986 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642730868 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_002028074 |
|---|
| Protein GI | 194365464 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCCTT CCCGCCTTCT CCTCATCACC GGCGTCAGCA GCGGCTTTGG CCGTGCCCTT
GCCCAACAGG CGCTGCTGGC CGGCCATCGC GTGGTCGGCA CCGTGCGCAA CGAACCCGCC
CGCCAGGCGT TCGAAACGCT GGCGCCCGGC CGCGCGTTTG GCCGCCTGCT GGACGTAACC
GATACCGCCG CCATCAATGC ACTCGTCGCC GATATCGAAA CCAACATCGG CAGCATCGAC
GTGCTGGTCA ACAACGCTGG CTACGGTCAC GAAGGCATCC TCGAAGAATC CACGCTGACC
GAGCTGCGGC AGCAGTTCGA GGTGAACGTG TTCGGCCCGG CCGCGCTGAT CAAGGCCGTG
CTGCCGCACA TGCGCGCGCG CCGCCGCGGC CACATCCTCA ACATCACGTC CATGGGCGGC
TTCATCACAA TGCCCGGCAT CGCCTGGTAC TGCGGTAGCA AGTTCGCGCT GGAGGGCATC
AGCGAAGTGC TTGGCAAGGA GGTTGCCCCG TTCGGCATCC ATGTCACCGC CGTCGCGCCG
GGCTCATTCC GCACCGACTG GGCAGGCCGC TCGATGGCGC GGGCGCCGCG CAGCATTGAC
GACTACGACG CATTGTTCGA TCCCATCCGC AGCGCGCGTG AGGCAAAGAG TGGCCACCAG
CTCGGTGATC CGGTGAAGGC TGCGCAGGCC ATGCTGCAAA TCATCGACAG CGACGCGCCG
CCCAGCCATC TGCTGCTGGG CAGTGATGCA CTGCAGCTGG TGCGGGCGAA GCTGGAAACG
ATGGCCGACA GCATCAACGC ATGGGAACAT CTCAGCCGTT CAACCGACGG CGTGGGCTGA
|
|---|
| Protein sequence | MPPSRLLLIT GVSSGFGRAL AQQALLAGHR VVGTVRNEPA RQAFETLAPG RAFGRLLDVT
DTAAINALVA DIETNIGSID VLVNNAGYGH EGILEESTLT ELRQQFEVNV FGPAALIKAV
LPHMRARRRG HILNITSMGG FITMPGIAWY CGSKFALEGI SEVLGKEVAP FGIHVTAVAP
GSFRTDWAGR SMARAPRSID DYDALFDPIR SAREAKSGHQ LGDPVKAAQA MLQIIDSDAP
PSHLLLGSDA LQLVRAKLET MADSINAWEH LSRSTDGVG
|
|---|
| |