| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4539 |
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| Symbol | |
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| ID | 5672888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5415888 |
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| End bp | 5416718 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641243404 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508820 |
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| Protein GI | 158316312 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACCT GGTTGATCAC CGGCTGTTCC ACGGGCCTGG GCCGCGCGCT CGCGCAGGCC
CTGCTCGATC ATGGCCACAA CGTGGCCGCC ACAGCCCGGG ACGTCGCCCA CGTGGCCGAC
CTCGCCGAGG CGTACCCCGG CCGCGCGCTC GCGCTCGCGC TCGACGTCAC CGATGGTGCG
CAGGTCACGC GCGCCGTCCA GCAGGCCGAA CAGCGGTTCG GTGGTGTCGA CGTGCTCGTC
AACAACGCCG GCTACGGGTA TCGGGCGGCG GTCGAGGAGG GCGACGAGGA CGACGTCCGC
CGGCTGTTCG CCACCAATTT CTTCGGCGCG GTGTCGATGG CCAAAGGTGT GCTCCCGGGC
ATGCGCGCGC GACGGCGTGG CGCGATCGTC AACATCTCGT CGATCGGCGC GCGCATCTGC
CCGCCGGGAT CGGGCTACTA CTCGGCGACC AAGGCGGCGC TCGAGGGCCT GACGGGCTCG
CTGCGCAGAG AGCTCGGGCC GCTCGGCATC CACGCGATCG TCGTCGAGCC CGGTGCCTTC
CGGACCGACT TCGCGGGCCG CTCTCTCCAG CAGGCCGCGA CGCCGATCGC CGACTACGTT
GACACGGCCG GGCGTCGCCG CAAGGAGCAC GACATGACGC ACGGCACCGA GCCGGGCGAC
CCGGCGAAGG CCGCCGAGGC GATCATCGCC GCCGTCGAGT CGGCGTCGCC CCCCGCGCTG
CTCGTGCTCG GCCAGGACGC CGTGCGGCTC TTCCGTGACA CGCTGGAGGG CCAGCTCGCT
GAGCTGACGG AGTGGGAGAA GACCAGCCTC GCCACCGCCG TCGACGCCTA G
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| Protein sequence | MQTWLITGCS TGLGRALAQA LLDHGHNVAA TARDVAHVAD LAEAYPGRAL ALALDVTDGA
QVTRAVQQAE QRFGGVDVLV NNAGYGYRAA VEEGDEDDVR RLFATNFFGA VSMAKGVLPG
MRARRRGAIV NISSIGARIC PPGSGYYSAT KAALEGLTGS LRRELGPLGI HAIVVEPGAF
RTDFAGRSLQ QAATPIADYV DTAGRRRKEH DMTHGTEPGD PAKAAEAIIA AVESASPPAL
LVLGQDAVRL FRDTLEGQLA ELTEWEKTSL ATAVDA
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